Fix linter issue

.github/workflows/__all-platform-bundle.yml

@@ -1,99 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: PR Check - All-platform bundle
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs:
-      dotnet-version:
-        type: string
-        description: The version of .NET to install
-        required: false
-        default: 9.x
-      go-version:
-        type: string
-        description: The version of Go to install
-        required: false
-        default: '>=1.21.0'
-  workflow_call:
-    inputs:
-      dotnet-version:
-        type: string
-        description: The version of .NET to install
-        required: false
-        default: 9.x
-      go-version:
-        type: string
-        description: The version of Go to install
-        required: false
-        default: '>=1.21.0'
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: all-platform-bundle-${{github.ref}}-${{inputs.dotnet-version}}-${{inputs.go-version}}
-jobs:
-  all-platform-bundle:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: nightly-latest
-          - os: macos-latest-xlarge
-            version: nightly-latest
-          - os: windows-latest
-            version: nightly-latest
-    name: All-platform bundle
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Install .NET
-        uses: actions/setup-dotnet@a98b56852c35b8e3190ac28c8c2271da59106c68 # v6.0.0
-        with:
-          dotnet-version: ${{ inputs.dotnet-version || '9.x' }}
-      - name: Install Go
-        uses: actions/setup-go@b7ad1dad31e06c5925ef5d2fc7ad053ef454303e # v7.0.0
-        with:
-          go-version: ${{ inputs.go-version || '>=1.21.0' }}
-          cache: false
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'true'
-          setup-kotlin: 'true'
-      - id: init
-        uses: ./../action/init
-        with:
-          # Swift is not supported on Ubuntu so we manually exclude it from the list here
-          languages: cpp,csharp,go,java,javascript,python,ruby
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - name: Build code
-        run: ./build.sh
-      - uses: ./../action/analyze
-    env:
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__analysis-kinds.yml

@@ -1,147 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: PR Check - Analysis kinds
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs: {}
-  workflow_call:
-    inputs: {}
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: analysis-kinds-${{github.ref}}
-jobs:
-  analysis-kinds:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: linked
-            analysis-kinds: code-scanning
-          - os: ubuntu-latest
-            version: linked
-            analysis-kinds: code-quality
-          - os: ubuntu-latest
-            version: linked
-            analysis-kinds: code-scanning,code-quality
-          - os: ubuntu-latest
-            version: linked
-            analysis-kinds: risk-assessment
-          - os: ubuntu-latest
-            version: nightly-latest
-            analysis-kinds: code-scanning
-          - os: ubuntu-latest
-            version: nightly-latest
-            analysis-kinds: code-quality
-          - os: ubuntu-latest
-            version: nightly-latest
-            analysis-kinds: code-scanning,code-quality
-          - os: ubuntu-latest
-            version: nightly-latest
-            analysis-kinds: risk-assessment
-    name: Analysis kinds
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - uses: ./../action/init
-        with:
-          languages: javascript
-          analysis-kinds: ${{ matrix.analysis-kinds }}
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - uses: ./../action/analyze
-        with:
-          output: '${{ runner.temp }}/results'
-          upload-database: false
-          post-processed-sarif-path: '${{ runner.temp }}/post-processed'
-
-      - name: Upload SARIF files
-        uses: actions/upload-artifact@043fb46d1a93c77aae656e7c1c64a875d1fc6a0a # v7.0.1
-        with:
-          name: |
-            analysis-kinds-${{ matrix.os }}-${{ matrix.version }}-${{ matrix.analysis-kinds }}
-          path: '${{ runner.temp }}/results/*.sarif'
-          retention-days: 7
-
-      - name: Upload post-processed SARIF
-        uses: actions/upload-artifact@043fb46d1a93c77aae656e7c1c64a875d1fc6a0a # v7.0.1
-        with:
-          name: |
-            post-processed-${{ matrix.os }}-${{ matrix.version }}-${{ matrix.analysis-kinds }}
-          path: '${{ runner.temp }}/post-processed'
-          retention-days: 7
-          if-no-files-found: error
-
-      - name: Check quality query does not appear in security SARIF
-        if: contains(matrix.analysis-kinds, 'code-scanning')
-        uses: actions/github-script@ed597411d8f924073f98dfc5c65a23a2325f34cd # v8.0.0
-        env:
-          SARIF_PATH: '${{ runner.temp }}/results/javascript.sarif'
-          EXPECT_PRESENT: 'false'
-        with:
-          script: ${{ env.CHECK_SCRIPT }}
-      - name: Check quality query appears in quality SARIF
-        if: contains(matrix.analysis-kinds, 'code-quality')
-        uses: actions/github-script@ed597411d8f924073f98dfc5c65a23a2325f34cd # v8.0.0
-        env:
-          SARIF_PATH: '${{ runner.temp }}/results/javascript.quality.sarif'
-          EXPECT_PRESENT: 'true'
-        with:
-          script: ${{ env.CHECK_SCRIPT }}
-    env:
-      CODEQL_ACTION_RISK_ASSESSMENT_ID: 1
-      CHECK_SCRIPT: |
-        const fs = require('fs');
-
-        const sarif = JSON.parse(fs.readFileSync(process.env['SARIF_PATH'], 'utf8'));
-        const expectPresent = JSON.parse(process.env['EXPECT_PRESENT']);
-        const run = sarif.runs[0];
-        const extensions = run.tool.extensions;
-
-        if (extensions === undefined) {
-          core.setFailed('`extensions` property not found in the SARIF run property bag.');
-        }
-
-        // ID of a query we want to check the presence for
-        const targetId = 'js/regex/always-matches';
-        const found = extensions.find(extension => extension.rules && extension.rules.find(rule => rule.id === targetId));
-
-        if (found && expectPresent) {
-          console.log(`Found rule with id '${targetId}'.`);
-        } else if (!found && !expectPresent) {
-          console.log(`Rule with id '${targetId}' was not found.`);
-        } else {
-          core.setFailed(`${ found ? "Found" : "Didn't find" } rule ${targetId}`);
-        }
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__analyze-ref-input.yml

@@ -1,97 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: "PR Check - Analyze: 'ref' and 'sha' from inputs"
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs:
-      dotnet-version:
-        type: string
-        description: The version of .NET to install
-        required: false
-        default: 9.x
-      go-version:
-        type: string
-        description: The version of Go to install
-        required: false
-        default: '>=1.21.0'
-  workflow_call:
-    inputs:
-      dotnet-version:
-        type: string
-        description: The version of .NET to install
-        required: false
-        default: 9.x
-      go-version:
-        type: string
-        description: The version of Go to install
-        required: false
-        default: '>=1.21.0'
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: analyze-ref-input-${{github.ref}}-${{inputs.dotnet-version}}-${{inputs.go-version}}
-jobs:
-  analyze-ref-input:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: default
-    name: "Analyze: 'ref' and 'sha' from inputs"
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Install .NET
-        uses: actions/setup-dotnet@a98b56852c35b8e3190ac28c8c2271da59106c68 # v6.0.0
-        with:
-          dotnet-version: ${{ inputs.dotnet-version || '9.x' }}
-      - name: Install Go
-        uses: actions/setup-go@b7ad1dad31e06c5925ef5d2fc7ad053ef454303e # v7.0.0
-        with:
-          go-version: ${{ inputs.go-version || '>=1.21.0' }}
-          cache: false
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - uses: ./../action/init
-        with:
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-          languages: cpp,csharp,java,javascript,python
-          config-file: ${{ github.repository }}/tests/multi-language-repo/.github/codeql/custom-queries.yml@${{ github.sha }}
-      - name: Build code
-        run: ./build.sh
-      - uses: ./../action/analyze
-        with:
-          ref: 'refs/heads/main'
-          sha: '5e235361806c361d4d3f8859e3c897658025a9a2'
-    env:
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__autobuild-action.yml

@@ -1,96 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: PR Check - autobuild-action
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs:
-      dotnet-version:
-        type: string
-        description: The version of .NET to install
-        required: false
-        default: 9.x
-  workflow_call:
-    inputs:
-      dotnet-version:
-        type: string
-        description: The version of .NET to install
-        required: false
-        default: 9.x
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: autobuild-action-${{github.ref}}-${{inputs.dotnet-version}}
-jobs:
-  autobuild-action:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: linked
-          - os: macos-latest
-            version: linked
-          - os: windows-latest
-            version: linked
-    name: autobuild-action
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Install .NET
-        uses: actions/setup-dotnet@a98b56852c35b8e3190ac28c8c2271da59106c68 # v6.0.0
-        with:
-          dotnet-version: ${{ inputs.dotnet-version || '9.x' }}
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - uses: ./../action/init
-        with:
-          languages: csharp
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - uses: ./../action/autobuild
-        env:
-          # Explicitly disable the CLR tracer.
-          COR_ENABLE_PROFILING: ''
-          COR_PROFILER: ''
-          COR_PROFILER_PATH_64: ''
-          CORECLR_ENABLE_PROFILING: ''
-          CORECLR_PROFILER: ''
-          CORECLR_PROFILER_PATH_64: ''
-      - uses: ./../action/analyze
-      - name: Check database
-        run: |
-          cd "$RUNNER_TEMP/codeql_databases"
-          if [[ ! -d csharp ]]; then
-            echo "Did not find a C# database"
-            exit 1
-          fi
-    env:
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__autobuild-direct-tracing-with-working-dir.yml

@@ -1,101 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: PR Check - Autobuild direct tracing (custom working directory)
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs:
-      java-version:
-        type: string
-        description: The version of Java to install
-        required: false
-        default: '17'
-  workflow_call:
-    inputs:
-      java-version:
-        type: string
-        description: The version of Java to install
-        required: false
-        default: '17'
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: autobuild-direct-tracing-with-working-dir-${{github.ref}}-${{inputs.java-version}}
-jobs:
-  autobuild-direct-tracing-with-working-dir:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: linked
-          - os: windows-latest
-            version: linked
-          - os: ubuntu-latest
-            version: nightly-latest
-          - os: windows-latest
-            version: nightly-latest
-    name: Autobuild direct tracing (custom working directory)
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Install Java
-        uses: actions/setup-java@de7274f081f381c8f8158605e0321c36c376e2e6 # v6.0.1
-        with:
-          java-version: ${{ inputs.java-version || '17' }}
-          distribution: temurin
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Test setup
-        run: |
-          # Make sure that Gradle build succeeds in autobuild-dir ...
-          cp -a ../action/tests/java-repo autobuild-dir
-          # ... and fails if attempted in the current directory
-          echo > build.gradle
-      - uses: ./../action/init
-        with:
-          build-mode: autobuild
-          languages: java
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - name: Check that indirect tracing is disabled
-        run: |
-          if [[ ! -z "${CODEQL_RUNNER}" ]]; then
-            echo "Expected indirect tracing to be disabled, but the" \
-              "CODEQL_RUNNER environment variable is set."
-            exit 1
-          fi
-      - uses: ./../action/autobuild
-        with:
-          working-directory: autobuild-dir
-      - uses: ./../action/analyze
-    env:
-      CODEQL_ACTION_AUTOBUILD_BUILD_MODE_DIRECT_TRACING: true
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__autobuild-working-dir.yml

@@ -1,78 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: PR Check - Autobuild working directory
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs: {}
-  workflow_call:
-    inputs: {}
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: autobuild-working-dir-${{github.ref}}
-jobs:
-  autobuild-working-dir:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: linked
-    name: Autobuild working directory
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Test setup
-        run: |
-          # Make sure that Gradle build succeeds in autobuild-dir ...
-          cp -a ../action/tests/java-repo autobuild-dir
-          # ... and fails if attempted in the current directory
-          echo > build.gradle
-      - uses: ./../action/init
-        with:
-          languages: java
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - uses: ./../action/autobuild
-        with:
-          working-directory: autobuild-dir
-      - uses: ./../action/analyze
-      - name: Check database
-        run: |
-          cd "$RUNNER_TEMP/codeql_databases"
-          if [[ ! -d java ]]; then
-            echo "Did not find a Java database"
-            exit 1
-          fi
-    env:
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__build-mode-autobuild.yml

@@ -1,118 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: PR Check - Build mode autobuild
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs:
-      java-version:
-        type: string
-        description: The version of Java to install
-        required: false
-        default: '17'
-  workflow_call:
-    inputs:
-      java-version:
-        type: string
-        description: The version of Java to install
-        required: false
-        default: '17'
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: build-mode-autobuild-${{github.ref}}-${{inputs.java-version}}
-jobs:
-  build-mode-autobuild:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: linked
-          - os: windows-latest
-            version: linked
-          - os: ubuntu-latest
-            version: nightly-latest
-          - os: windows-latest
-            version: nightly-latest
-    name: Build mode autobuild
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Install Java
-        uses: actions/setup-java@de7274f081f381c8f8158605e0321c36c376e2e6 # v6.0.1
-        with:
-          java-version: ${{ inputs.java-version || '17' }}
-          distribution: temurin
-      - name: Install yq
-        if: runner.os == 'Windows'
-        env:
-          YQ_PATH: ${{ runner.temp }}/yq
-          YQ_VERSION: v4.50.1
-        run: |-
-          gh release download --repo mikefarah/yq --pattern "yq_windows_amd64.exe" "$YQ_VERSION" -O "$YQ_PATH/yq.exe"
-          echo "$YQ_PATH" >> "$GITHUB_PATH"
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Set up Java test repo configuration
-        run: |
-          mv * .github ../action/tests/multi-language-repo/
-          mv ../action/tests/multi-language-repo/.github/workflows .github
-          mv ../action/tests/java-repo/* .
-
-      - uses: ./../action/init
-        id: init
-        with:
-          build-mode: autobuild
-          db-location: '${{ runner.temp }}/customDbLocation'
-          languages: java
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-
-      - name: Validate database build mode
-        run: |
-          metadata_path="$RUNNER_TEMP/customDbLocation/java/codeql-database.yml"
-          build_mode=$(yq eval '.buildMode' "$metadata_path")
-          if [[ "$build_mode" != "autobuild" ]]; then
-            echo "Expected build mode to be 'autobuild' but was $build_mode"
-            exit 1
-          fi
-
-      - name: Check that indirect tracing is disabled
-        run: |
-          if [[ ! -z "${CODEQL_RUNNER}" ]]; then
-            echo "Expected indirect tracing to be disabled, but the" \
-              "CODEQL_RUNNER environment variable is set."
-            exit 1
-          fi
-
-      - uses: ./../action/analyze
-    env:
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__build-mode-manual.yml

@@ -1,107 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: PR Check - Build mode manual
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs:
-      dotnet-version:
-        type: string
-        description: The version of .NET to install
-        required: false
-        default: 9.x
-      go-version:
-        type: string
-        description: The version of Go to install
-        required: false
-        default: '>=1.21.0'
-  workflow_call:
-    inputs:
-      dotnet-version:
-        type: string
-        description: The version of .NET to install
-        required: false
-        default: 9.x
-      go-version:
-        type: string
-        description: The version of Go to install
-        required: false
-        default: '>=1.21.0'
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: build-mode-manual-${{github.ref}}-${{inputs.dotnet-version}}-${{inputs.go-version}}
-jobs:
-  build-mode-manual:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: nightly-latest
-    name: Build mode manual
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Install .NET
-        uses: actions/setup-dotnet@a98b56852c35b8e3190ac28c8c2271da59106c68 # v6.0.0
-        with:
-          dotnet-version: ${{ inputs.dotnet-version || '9.x' }}
-      - name: Install Go
-        uses: actions/setup-go@b7ad1dad31e06c5925ef5d2fc7ad053ef454303e # v7.0.0
-        with:
-          go-version: ${{ inputs.go-version || '>=1.21.0' }}
-          cache: false
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - uses: ./../action/init
-        id: init
-        with:
-          build-mode: manual
-          db-location: '${{ runner.temp }}/customDbLocation'
-          languages: java
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-
-      - name: Validate database build mode
-        run: |
-          metadata_path="$RUNNER_TEMP/customDbLocation/java/codeql-database.yml"
-          build_mode=$(yq eval '.buildMode' "$metadata_path")
-          if [[ "$build_mode" != "manual" ]]; then
-            echo "Expected build mode to be 'manual' but was $build_mode"
-            exit 1
-          fi
-
-      - name: Build code
-        run: ./build.sh
-
-      - uses: ./../action/analyze
-    env:
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__build-mode-none.yml

@@ -1,81 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: PR Check - Build mode none
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs: {}
-  workflow_call:
-    inputs: {}
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: build-mode-none-${{github.ref}}
-jobs:
-  build-mode-none:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: linked
-          - os: ubuntu-latest
-            version: nightly-latest
-    name: Build mode none
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - uses: ./../action/init
-        id: init
-        with:
-          build-mode: none
-          db-location: '${{ runner.temp }}/customDbLocation'
-          languages: java
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-
-      - name: Validate database build mode
-        run: |
-          metadata_path="$RUNNER_TEMP/customDbLocation/java/codeql-database.yml"
-          build_mode=$(yq eval '.buildMode' "$metadata_path")
-          if [[ "$build_mode" != "none" ]]; then
-            echo "Expected build mode to be 'none' but was $build_mode"
-            exit 1
-          fi
-
-      # The latest nightly supports omitting the autobuild Action when the build mode is specified.
-      - uses: ./../action/autobuild
-        if: matrix.version != 'nightly-latest'
-
-      - uses: ./../action/analyze
-    env:
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__build-mode-rollback.yml

@@ -1,82 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: PR Check - Build mode rollback
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs: {}
-  workflow_call:
-    inputs: {}
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: build-mode-rollback-${{github.ref}}
-jobs:
-  build-mode-rollback:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: nightly-latest
-    name: Build mode rollback
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Set up Java test repo configuration
-        run: |
-          mv * .github ../action/tests/multi-language-repo/
-          mv ../action/tests/multi-language-repo/.github/workflows .github
-          mv ../action/tests/java-repo/* .
-
-      - uses: ./../action/init
-        id: init
-        with:
-          build-mode: none
-          db-location: '${{ runner.temp }}/customDbLocation'
-          languages: java
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-
-      - name: Validate database build mode
-        run: |
-          metadata_path="$RUNNER_TEMP/customDbLocation/java/codeql-database.yml"
-          build_mode=$(yq eval '.buildMode' "$metadata_path")
-          if [[ "$build_mode" != "autobuild" ]]; then
-            echo "Expected build mode to be 'autobuild' but was $build_mode"
-            exit 1
-          fi
-
-      - uses: ./../action/analyze
-    env:
-      CODEQL_ACTION_DISABLE_JAVA_BUILDLESS: true
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__bundle-from-nightly.yml

@@ -1,67 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: 'PR Check - Bundle: From nightly'
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs: {}
-  workflow_call:
-    inputs: {}
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: bundle-from-nightly-${{github.ref}}
-jobs:
-  bundle-from-nightly:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: linked
-    name: 'Bundle: From nightly'
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - id: init
-        uses: ./../action/init
-        env:
-          CODEQL_ACTION_FORCE_NIGHTLY: true
-        with:
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-          languages: javascript
-      - name: Fail if the CodeQL version is not a nightly
-        if: ${{ !contains(steps.init.outputs.codeql-version, '+') }}
-        run: exit 1
-    env:
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__bundle-from-toolcache.yml

@@ -1,83 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: 'PR Check - Bundle: From toolcache'
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs: {}
-  workflow_call:
-    inputs: {}
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: bundle-from-toolcache-${{github.ref}}
-jobs:
-  bundle-from-toolcache:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: toolcache
-    name: 'Bundle: From toolcache'
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Install @actions/tool-cache
-        run: npm install @actions/tool-cache@3
-      - name: Check toolcache contains CodeQL
-        continue-on-error: true
-        uses: actions/github-script@ed597411d8f924073f98dfc5c65a23a2325f34cd # v8.0.0
-        with:
-          script: |
-            const toolcache = require('@actions/tool-cache');
-            const allCodeqlVersions = toolcache.findAllVersions('CodeQL');
-            if (allCodeqlVersions.length === 0) {
-              throw new Error(`CodeQL could not be found in the toolcache`);
-            }
-      - id: setup-codeql
-        uses: ./../action/setup-codeql
-        with:
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - name: Check CodeQL is installed within the toolcache
-        uses: actions/github-script@ed597411d8f924073f98dfc5c65a23a2325f34cd # v8.0.0
-        with:
-          script: |
-            const toolcache = require('@actions/tool-cache');
-            const allCodeqlVersions = toolcache.findAllVersions('CodeQL');
-            console.log(`Found CodeQL versions: ${allCodeqlVersions}`);
-            if (allCodeqlVersions.length === 0) {
-              throw new Error('CodeQL not found in toolcache');
-            }
-    env:
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__bundle-toolcache.yml

@@ -1,104 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: 'PR Check - Bundle: Caching checks'
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs: {}
-  workflow_call:
-    inputs: {}
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: bundle-toolcache-${{github.ref}}
-jobs:
-  bundle-toolcache:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: linked
-          - os: macos-latest
-            version: linked
-          - os: windows-latest
-            version: linked
-    name: 'Bundle: Caching checks'
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Remove CodeQL from toolcache
-        uses: actions/github-script@ed597411d8f924073f98dfc5c65a23a2325f34cd # v8.0.0
-        with:
-          script: |
-            const fs = require('fs');
-            const path = require('path');
-            const codeqlPath = path.join(process.env['RUNNER_TOOL_CACHE'], 'CodeQL');
-            fs.rmdirSync(codeqlPath, { recursive: true });
-      - name: Install @actions/tool-cache
-        run: npm install @actions/tool-cache@3
-      - name: Check toolcache does not contain CodeQL
-        uses: actions/github-script@ed597411d8f924073f98dfc5c65a23a2325f34cd # v8.0.0
-        with:
-          script: |
-            const toolcache = require('@actions/tool-cache');
-            const allCodeqlVersions = toolcache.findAllVersions('CodeQL');
-            if (allCodeqlVersions.length !== 0) {
-              throw new Error(`CodeQL should not be found in the toolcache, but found ${allCodeqlVersions}`);
-            }
-            console.log('No versions of CodeQL found in the toolcache');
-      - id: init
-        uses: ./../action/init
-        with:
-          # Request multiple languages so this check uses the combined bundle.
-          languages: javascript,python
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - uses: ./../action/analyze
-        with:
-          output: ${{ runner.temp }}/results
-          upload-database: false
-      - name: Check CodeQL is installed within the toolcache
-        uses: actions/github-script@ed597411d8f924073f98dfc5c65a23a2325f34cd # v8.0.0
-        with:
-          script: |
-            const toolcache = require('@actions/tool-cache');
-            const allCodeqlVersions = toolcache.findAllVersions('CodeQL');
-            console.log(`Found CodeQL versions: ${allCodeqlVersions}`);
-            if (allCodeqlVersions.length === 0) {
-              throw new Error('CodeQL not found in toolcache');
-            }
-            if (allCodeqlVersions.length > 1) {
-              throw new Error('Multiple CodeQL versions found in toolcache');
-            }
-    env:
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__cleanup-db-cluster-dir.yml

@@ -1,77 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: PR Check - Clean up database cluster directory
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs: {}
-  workflow_call:
-    inputs: {}
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: cleanup-db-cluster-dir-${{github.ref}}
-jobs:
-  cleanup-db-cluster-dir:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: linked
-    name: Clean up database cluster directory
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Add a file to the database cluster directory
-        run: |
-          mkdir -p "${{ runner.temp }}/customDbLocation/javascript"
-          touch "${{ runner.temp }}/customDbLocation/javascript/a-file-to-clean-up.txt"
-
-      - uses: ./../action/init
-        id: init
-        with:
-          build-mode: none
-          db-location: '${{ runner.temp }}/customDbLocation'
-          languages: javascript
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-
-      - name: Validate file cleaned up
-        run: |
-          if [[ -f "${{ runner.temp }}/customDbLocation/javascript/a-file-to-clean-up.txt" ]]; then
-            echo "File was not cleaned up"
-            exit 1
-          fi
-          echo "File was cleaned up"
-    env:
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__config-export.yml

@@ -1,100 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: PR Check - Config export
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs: {}
-  workflow_call:
-    inputs: {}
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: config-export-${{github.ref}}
-jobs:
-  config-export:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: linked
-          - os: ubuntu-latest
-            version: nightly-latest
-    name: Config export
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - uses: ./../action/init
-        with:
-          languages: javascript
-          queries: security-extended
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - uses: ./../action/analyze
-        with:
-          output: '${{ runner.temp }}/results'
-          upload-database: false
-      - name: Upload SARIF
-        uses: actions/upload-artifact@043fb46d1a93c77aae656e7c1c64a875d1fc6a0a # v7.0.1
-        with:
-          name: config-export-${{ matrix.os }}-${{ matrix.version }}.sarif.json
-          path: '${{ runner.temp }}/results/javascript.sarif'
-          retention-days: 7
-      - name: Check config properties appear in SARIF
-        uses: actions/github-script@ed597411d8f924073f98dfc5c65a23a2325f34cd # v8.0.0
-        env:
-          SARIF_PATH: '${{ runner.temp }}/results/javascript.sarif'
-        with:
-          script: |
-            const fs = require('fs');
-
-            const sarif = JSON.parse(fs.readFileSync(process.env['SARIF_PATH'], 'utf8'));
-            const run = sarif.runs[0];
-            const configSummary = run.properties.codeqlConfigSummary;
-
-            if (configSummary === undefined) {
-              core.setFailed('`codeqlConfigSummary` property not found in the SARIF run property bag.');
-            }
-            if (configSummary.disableDefaultQueries !== false) {
-              core.setFailed('`disableDefaultQueries` property incorrect: expected false, got ' +
-                `${JSON.stringify(configSummary.disableDefaultQueries)}.`);
-            }
-            const expectedQueries = [{ type: 'builtinSuite', uses: 'security-extended' }];
-            // Use JSON.stringify to deep-equal the arrays.
-            if (JSON.stringify(configSummary.queries) !== JSON.stringify(expectedQueries)) {
-              core.setFailed(`\`queries\` property incorrect: expected ${JSON.stringify(expectedQueries)}, got ` +
-                `${JSON.stringify(configSummary.queries)}.`);
-            }
-            core.info('Finished config export tests.');
-    env:
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__config-input.yml

@@ -1,94 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: PR Check - Config input
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs: {}
-  workflow_call:
-    inputs: {}
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: config-input-${{github.ref}}
-jobs:
-  config-input:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: linked
-    name: Config input
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Install Node.js
-        uses: actions/setup-node@820762786026740c76f36085b0efc47a31fe5020 # v7.0.0
-        with:
-          node-version: 20.x
-          cache: npm
-      - name: Install newer npm
-        run: npm install -g npm@11.19.1
-      - name: Install dependencies
-        run: npm ci
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Copy queries into workspace
-        run: |
-          cp -a ../action/queries .
-
-      - uses: ./../action/init
-        with:
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-          languages: javascript
-          build-mode: none
-          config: |
-            disable-default-queries: true
-            queries:
-              - name: Run custom query
-                uses: ./queries/default-setup-environment-variables.ql
-            paths-ignore:
-              - tests
-              - lib
-
-      - uses: ./../action/analyze
-        with:
-          output: ${{ runner.temp }}/results
-
-      - name: Check SARIF
-        uses: ./../action/.github/actions/check-sarif
-        with:
-          sarif-file: ${{ runner.temp }}/results/javascript.sarif
-          queries-run: javascript/codeql-action/default-setup-env-vars
-          queries-not-run: javascript/codeql-action/default-setup-context-properties
-    env:
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__cpp-deptrace-disabled.yml

@@ -1,79 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: 'PR Check - C/C++: disabling autoinstalling dependencies (Linux)'
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs: {}
-  workflow_call:
-    inputs: {}
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: cpp-deptrace-disabled-${{github.ref}}
-jobs:
-  cpp-deptrace-disabled:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: linked
-          - os: ubuntu-latest
-            version: default
-          - os: ubuntu-latest
-            version: nightly-latest
-    name: 'C/C++: disabling autoinstalling dependencies (Linux)'
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Test setup
-        run: |
-          cp -a ../action/tests/cpp-autobuild autobuild-dir
-      - uses: ./../action/init
-        with:
-          languages: cpp
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - uses: ./../action/autobuild
-        with:
-          working-directory: autobuild-dir
-        env:
-          CODEQL_EXTRACTOR_CPP_AUTOINSTALL_DEPENDENCIES: false
-      - run: |
-          if ls /usr/bin/errno; then
-            echo "C/C++ autobuild installed errno, but it should not have since auto-install dependencies is disabled."
-            exit 1
-          fi
-    env:
-      DOTNET_GENERATE_ASPNET_CERTIFICATE: 'false'
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__cpp-deptrace-enabled-on-macos.yml

@@ -1,79 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: 'PR Check - C/C++: autoinstalling dependencies is skipped (macOS)'
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs: {}
-  workflow_call:
-    inputs: {}
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: cpp-deptrace-enabled-on-macos-${{github.ref}}
-jobs:
-  cpp-deptrace-enabled-on-macos:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: macos-latest
-            version: linked
-          - os: macos-latest
-            version: nightly-latest
-    name: 'C/C++: autoinstalling dependencies is skipped (macOS)'
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Test setup
-        run: |
-          cp -a ../action/tests/cpp-autobuild autobuild-dir
-      - uses: ./../action/init
-        with:
-          languages: cpp
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - uses: ./../action/autobuild
-        with:
-          working-directory: autobuild-dir
-        env:
-          CODEQL_EXTRACTOR_CPP_AUTOINSTALL_DEPENDENCIES: true
-      - run: |
-          if ! ls /usr/bin/errno; then
-            echo "As expected, CODEQL_EXTRACTOR_CPP_AUTOINSTALL_DEPENDENCIES is a no-op on macOS"
-          else
-            echo "CODEQL_EXTRACTOR_CPP_AUTOINSTALL_DEPENDENCIES should not have had any effect on macOS"
-            exit 1
-          fi
-    env:
-      DOTNET_GENERATE_ASPNET_CERTIFICATE: 'false'
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__cpp-deptrace-enabled.yml

@@ -1,79 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: 'PR Check - C/C++: autoinstalling dependencies (Linux)'
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs: {}
-  workflow_call:
-    inputs: {}
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: cpp-deptrace-enabled-${{github.ref}}
-jobs:
-  cpp-deptrace-enabled:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: linked
-          - os: ubuntu-latest
-            version: default
-          - os: ubuntu-latest
-            version: nightly-latest
-    name: 'C/C++: autoinstalling dependencies (Linux)'
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Test setup
-        run: |
-          cp -a ../action/tests/cpp-autobuild autobuild-dir
-      - uses: ./../action/init
-        with:
-          languages: cpp
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - uses: ./../action/autobuild
-        with:
-          working-directory: autobuild-dir
-        env:
-          CODEQL_EXTRACTOR_CPP_AUTOINSTALL_DEPENDENCIES: true
-      - run: |
-          if ! ls /usr/bin/errno; then
-            echo "Did not autoinstall errno"
-            exit 1
-          fi
-    env:
-      DOTNET_GENERATE_ASPNET_CERTIFICATE: 'false'
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__diagnostics-export.yml

@@ -1,136 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: PR Check - Diagnostic export
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs: {}
-  workflow_call:
-    inputs: {}
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: diagnostics-export-${{github.ref}}
-jobs:
-  diagnostics-export:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: linked
-          - os: ubuntu-latest
-            version: nightly-latest
-    name: Diagnostic export
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - uses: ./../action/init
-        id: init
-        with:
-          languages: javascript
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - name: Add test diagnostics
-        env:
-          CODEQL_PATH: ${{ steps.init.outputs.codeql-path }}
-        run: |
-          "$CODEQL_PATH" database add-diagnostic \
-            "$RUNNER_TEMP/codeql_databases/javascript" \
-            --file-path /path/to/file \
-            --plaintext-message "Plaintext message" \
-            --source-id "lang/diagnostics/example" \
-            --source-name "Diagnostic name" \
-            --ready-for-status-page
-      - uses: ./../action/analyze
-        with:
-          output: '${{ runner.temp }}/results'
-          upload-database: false
-      - name: Upload SARIF
-        uses: actions/upload-artifact@043fb46d1a93c77aae656e7c1c64a875d1fc6a0a # v7.0.1
-        with:
-          name: diagnostics-export-${{ matrix.os }}-${{ matrix.version }}.sarif.json
-          path: '${{ runner.temp }}/results/javascript.sarif'
-          retention-days: 7
-      - name: Check diagnostics appear in SARIF
-        uses: actions/github-script@ed597411d8f924073f98dfc5c65a23a2325f34cd # v8.0.0
-        env:
-          SARIF_PATH: '${{ runner.temp }}/results/javascript.sarif'
-        with:
-          script: |
-            const fs = require('fs');
-
-            function checkStatusPageNotification(n) {
-              const expectedMessage = 'Plaintext message';
-              if (n.message.text !== expectedMessage) {
-                core.setFailed(`Expected the status page diagnostic to have the message '${expectedMessage}', but found '${n.message.text}'.`);
-              }
-              if (n.locations.length !== 1) {
-                core.setFailed(`Expected the status page diagnostic to have exactly 1 location, but found ${n.locations.length}.`);
-              }
-            }
-
-            const sarif = JSON.parse(fs.readFileSync(process.env['SARIF_PATH'], 'utf8'));
-            const run = sarif.runs[0];
-
-            const toolExecutionNotifications = run.invocations[0].toolExecutionNotifications;
-            const statusPageNotifications = toolExecutionNotifications.filter(n =>
-              n.descriptor.id === 'lang/diagnostics/example' && n.properties?.visibility?.statusPage
-            );
-            if (statusPageNotifications.length !== 1) {
-              core.setFailed(
-                'Expected exactly one status page reporting descriptor for this diagnostic in the ' +
-                  `'runs[].invocations[].toolExecutionNotifications[]' SARIF property, but found ` +
-                  `${statusPageNotifications.length}. All notification reporting descriptors: ` +
-                  `${JSON.stringify(toolExecutionNotifications)}.`
-              );
-            }
-            checkStatusPageNotification(statusPageNotifications[0]);
-
-            const notifications = run.tool.driver.notifications;
-            const diagnosticNotification = notifications.filter(n =>
-              n.id === 'lang/diagnostics/example' && n.name === 'lang/diagnostics/example' &&
-                n.fullDescription.text === 'Diagnostic name'
-            );
-            if (diagnosticNotification.length !== 1) {
-              core.setFailed(
-                'Expected exactly one notification for this diagnostic in the ' +
-                  `'runs[].tool.driver.notifications[]' SARIF property, but found ` +
-                  `${diagnosticNotification.length}. All notifications: ` +
-                  `${JSON.stringify(notifications)}.`
-              );
-            }
-
-            core.info('Finished diagnostic export test');
-    env:
-      CODEQL_ACTION_EXPORT_DIAGNOSTICS: true
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__export-file-baseline-information.yml

@@ -1,128 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: PR Check - Export file baseline information
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs:
-      dotnet-version:
-        type: string
-        description: The version of .NET to install
-        required: false
-        default: 9.x
-      go-version:
-        type: string
-        description: The version of Go to install
-        required: false
-        default: '>=1.21.0'
-  workflow_call:
-    inputs:
-      dotnet-version:
-        type: string
-        description: The version of .NET to install
-        required: false
-        default: 9.x
-      go-version:
-        type: string
-        description: The version of Go to install
-        required: false
-        default: '>=1.21.0'
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: export-file-baseline-information-${{github.ref}}-${{inputs.dotnet-version}}-${{inputs.go-version}}
-jobs:
-  export-file-baseline-information:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: nightly-latest
-          - os: macos-latest
-            version: nightly-latest
-          - os: windows-latest
-            version: nightly-latest
-    name: Export file baseline information
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Install .NET
-        uses: actions/setup-dotnet@a98b56852c35b8e3190ac28c8c2271da59106c68 # v6.0.0
-        with:
-          dotnet-version: ${{ inputs.dotnet-version || '9.x' }}
-      - name: Install Go
-        uses: actions/setup-go@b7ad1dad31e06c5925ef5d2fc7ad053ef454303e # v7.0.0
-        with:
-          go-version: ${{ inputs.go-version || '>=1.21.0' }}
-          cache: false
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - uses: ./../action/init
-        id: init
-        with:
-          languages: javascript
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - name: Build code
-        run: ./build.sh
-      - uses: ./../action/analyze
-        with:
-          output: '${{ runner.temp }}/results'
-      - name: Upload SARIF
-        uses: actions/upload-artifact@043fb46d1a93c77aae656e7c1c64a875d1fc6a0a # v7.0.1
-        with:
-          name: with-baseline-information-${{ matrix.os }}-${{ matrix.version }}.sarif.json
-          path: '${{ runner.temp }}/results/javascript.sarif'
-          retention-days: 7
-      - name: Check results
-        run: |
-          cd "$RUNNER_TEMP/results"
-          expected_baseline_languages="c csharp go java kotlin javascript python ruby"
-          if [[ $RUNNER_OS == "macOS" ]]; then
-            expected_baseline_languages+=" swift"
-          fi
-
-          for lang in ${expected_baseline_languages}; do
-            rule_name="cli/expected-extracted-files/${lang}"
-            found_notification=$(jq --arg rule_name "${rule_name}" '[.runs[0].tool.driver.notifications |
-              select(. != null) | flatten | .[].id] | any(. == $rule_name)' javascript.sarif)
-            if [[ "${found_notification}" != "true" ]]; then
-              echo "Expected SARIF output to contain notification '${rule_name}', but found no such notification."
-              exit 1
-            else
-              echo "Found notification '${rule_name}'."
-            fi
-          done
-    env:
-      CODEQL_ACTION_SKIP_FILE_COVERAGE_ON_PRS: false
-      CODEQL_ACTION_SUBLANGUAGE_FILE_COVERAGE: true
-      CODEQL_ACTION_PER_LANGUAGE_BUNDLES: false
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__extractor-ram-threads.yml

@@ -1,80 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: PR Check - Extractor ram and threads options test
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs: {}
-  workflow_call:
-    inputs: {}
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: extractor-ram-threads-${{github.ref}}
-jobs:
-  extractor-ram-threads:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: linked
-    name: Extractor ram and threads options test
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - uses: ./../action/init
-        with:
-          languages: java
-          ram: 230
-          threads: 1
-      - name: Assert Results
-        run: |
-          if [ "${CODEQL_RAM}" != "230" ]; then
-            echo "CODEQL_RAM is '${CODEQL_RAM}' instead of 230"
-            exit 1
-          fi
-          if [ "${CODEQL_EXTRACTOR_JAVA_RAM}" != "230" ]; then
-            echo "CODEQL_EXTRACTOR_JAVA_RAM is '${CODEQL_EXTRACTOR_JAVA_RAM}' instead of 230"
-            exit 1
-          fi
-          if [ "${CODEQL_THREADS}" != "1" ]; then
-            echo "CODEQL_THREADS is '${CODEQL_THREADS}' instead of 1"
-            exit 1
-          fi
-          if [ "${CODEQL_EXTRACTOR_JAVA_THREADS}" != "1" ]; then
-            echo "CODEQL_EXTRACTOR_JAVA_THREADS is '${CODEQL_EXTRACTOR_JAVA_THREADS}' instead of 1"
-            exit 1
-          fi
-    env:
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__global-proxy.yml

@@ -1,101 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: PR Check - Proxy test
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs: {}
-  workflow_call:
-    inputs: {}
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: global-proxy-${{github.ref}}
-jobs:
-  global-proxy:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: linked
-          - os: ubuntu-latest
-            version: nightly-latest
-    name: Proxy test
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'false'
-      - name: Block direct internet access to force proxy usage
-        run: |
-          apt-get update -qq && apt-get install -y -qq iptables >/dev/null 2>&1
-          PROXY_IP=$(getent hosts squid-proxy | awk '{ print $1 }')
-          echo "Squid proxy IP: $PROXY_IP"
-          # Allow all traffic to the proxy container
-          iptables -A OUTPUT -d "$PROXY_IP" -j ACCEPT
-          # Allow DNS resolution
-          iptables -A OUTPUT -p udp --dport 53 -j ACCEPT
-          iptables -A OUTPUT -p tcp --dport 53 -j ACCEPT
-          # Allow loopback
-          iptables -A OUTPUT -o lo -j ACCEPT
-          # Allow already-established connections (from checkout/prepare-test)
-          iptables -A OUTPUT -m conntrack --ctstate ESTABLISHED,RELATED -j ACCEPT
-          # Block all other outbound HTTP and HTTPS, ensuring direct access fails
-          iptables -A OUTPUT -p tcp --dport 80 -j REJECT --reject-with tcp-reset
-          iptables -A OUTPUT -p tcp --dport 443 -j REJECT --reject-with tcp-reset
-          echo "Direct HTTP/HTTPS access is now blocked - all traffic must go through the proxy"
-
-      - name: Set proxy environment variables
-        shell: bash
-        run: |
-          echo "http_proxy=http://squid-proxy:3128" >> $GITHUB_ENV
-          echo "HTTP_PROXY=http://squid-proxy:3128" >> $GITHUB_ENV
-          echo "https_proxy=http://squid-proxy:3128" >> $GITHUB_ENV
-          echo "HTTPS_PROXY=http://squid-proxy:3128" >> $GITHUB_ENV
-
-      - uses: ./../action/init
-        with:
-          languages: javascript
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-
-      - uses: ./../action/analyze
-    env:
-      CODEQL_ACTION_TOLERATE_MISSING_GIT_VERSION: true
-      CODEQL_ACTION_TEST_MODE: true
-    container:
-      image: ubuntu:22.04
-      options: --cap-add=NET_ADMIN
-    services:
-      squid-proxy:
-        image: ubuntu/squid:latest
-        ports:
-          - 3128:3128

.github/workflows/__go-custom-queries.yml

@@ -1,97 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: 'PR Check - Go: Custom queries'
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs:
-      dotnet-version:
-        type: string
-        description: The version of .NET to install
-        required: false
-        default: 9.x
-      go-version:
-        type: string
-        description: The version of Go to install
-        required: false
-        default: '>=1.21.0'
-  workflow_call:
-    inputs:
-      dotnet-version:
-        type: string
-        description: The version of .NET to install
-        required: false
-        default: 9.x
-      go-version:
-        type: string
-        description: The version of Go to install
-        required: false
-        default: '>=1.21.0'
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: go-custom-queries-${{github.ref}}-${{inputs.dotnet-version}}-${{inputs.go-version}}
-jobs:
-  go-custom-queries:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: linked
-          - os: ubuntu-latest
-            version: nightly-latest
-    name: 'Go: Custom queries'
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Install .NET
-        uses: actions/setup-dotnet@a98b56852c35b8e3190ac28c8c2271da59106c68 # v6.0.0
-        with:
-          dotnet-version: ${{ inputs.dotnet-version || '9.x' }}
-      - name: Install Go
-        uses: actions/setup-go@b7ad1dad31e06c5925ef5d2fc7ad053ef454303e # v7.0.0
-        with:
-          go-version: ${{ inputs.go-version || '>=1.21.0' }}
-          cache: false
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - uses: ./../action/init
-        with:
-          languages: go
-          config-file: ./.github/codeql/custom-queries.yml
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - name: Build code
-        run: ./build.sh
-      - uses: ./../action/analyze
-    env:
-      DOTNET_GENERATE_ASPNET_CERTIFICATE: 'false'
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__go-indirect-tracing-workaround-diagnostic.yml

@@ -1,109 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: 'PR Check - Go: diagnostic when Go is changed after init step'
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs:
-      go-version:
-        type: string
-        description: The version of Go to install
-        required: false
-        default: '>=1.21.0'
-  workflow_call:
-    inputs:
-      go-version:
-        type: string
-        description: The version of Go to install
-        required: false
-        default: '>=1.21.0'
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: go-indirect-tracing-workaround-diagnostic-${{github.ref}}-${{inputs.go-version}}
-jobs:
-  go-indirect-tracing-workaround-diagnostic:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: default
-    name: 'Go: diagnostic when Go is changed after init step'
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Install Go
-        uses: actions/setup-go@b7ad1dad31e06c5925ef5d2fc7ad053ef454303e # v7.0.0
-        with:
-          go-version: ${{ inputs.go-version || '>=1.21.0' }}
-          cache: false
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - uses: ./../action/init
-        with:
-          languages: go
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      # Deliberately change Go after the `init` step
-      - uses: actions/setup-go@b7ad1dad31e06c5925ef5d2fc7ad053ef454303e # v7.0.0
-        with:
-          go-version: '1.20'
-      - name: Build code
-        run: go build main.go
-      - uses: ./../action/analyze
-        with:
-          output: '${{ runner.temp }}/results'
-          upload-database: false
-      - name: Check diagnostic appears in SARIF
-        uses: actions/github-script@ed597411d8f924073f98dfc5c65a23a2325f34cd # v8.0.0
-        env:
-          SARIF_PATH: '${{ runner.temp }}/results/go.sarif'
-        with:
-          script: |
-            const fs = require('fs');
-
-            const sarif = JSON.parse(fs.readFileSync(process.env['SARIF_PATH'], 'utf8'));
-            const run = sarif.runs[0];
-
-            const toolExecutionNotifications = run.invocations[0].toolExecutionNotifications;
-            const statusPageNotifications = toolExecutionNotifications.filter(n =>
-              n.descriptor.id === 'go/workflow/go-installed-after-codeql-init' && n.properties?.visibility?.statusPage
-            );
-            if (statusPageNotifications.length !== 1) {
-              core.setFailed(
-                'Expected exactly one status page reporting descriptor for this diagnostic in the ' +
-                  `'runs[].invocations[].toolExecutionNotifications[]' SARIF property, but found ` +
-                  `${statusPageNotifications.length}. All notification reporting descriptors: ` +
-                  `${JSON.stringify(toolExecutionNotifications)}.`
-              );
-            }
-    env:
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__go-indirect-tracing-workaround-no-file-program.yml

@@ -1,110 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: 'PR Check - Go: diagnostic when `file` is not installed'
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs:
-      go-version:
-        type: string
-        description: The version of Go to install
-        required: false
-        default: '>=1.21.0'
-  workflow_call:
-    inputs:
-      go-version:
-        type: string
-        description: The version of Go to install
-        required: false
-        default: '>=1.21.0'
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: go-indirect-tracing-workaround-no-file-program-${{github.ref}}-${{inputs.go-version}}
-jobs:
-  go-indirect-tracing-workaround-no-file-program:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: default
-    name: 'Go: diagnostic when `file` is not installed'
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Install Go
-        uses: actions/setup-go@b7ad1dad31e06c5925ef5d2fc7ad053ef454303e # v7.0.0
-        with:
-          go-version: ${{ inputs.go-version || '>=1.21.0' }}
-          cache: false
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Remove `file` program
-        run: |
-          echo $(which file)
-          sudo rm -rf $(which file)
-          echo $(which file)
-      - uses: ./../action/init
-        with:
-          languages: go
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - name: Build code
-        run: go build main.go
-      - uses: ./../action/analyze
-        with:
-          output: '${{ runner.temp }}/results'
-          upload-database: false
-      - name: Check diagnostic appears in SARIF
-        uses: actions/github-script@ed597411d8f924073f98dfc5c65a23a2325f34cd # v8.0.0
-        env:
-          SARIF_PATH: '${{ runner.temp }}/results/go.sarif'
-        with:
-          script: |
-            const fs = require('fs');
-
-            const sarif = JSON.parse(fs.readFileSync(process.env['SARIF_PATH'], 'utf8'));
-            const run = sarif.runs[0];
-
-            const toolExecutionNotifications = run.invocations[0].toolExecutionNotifications;
-            const statusPageNotifications = toolExecutionNotifications.filter(n =>
-              n.descriptor.id === 'go/workflow/file-program-unavailable' && n.properties?.visibility?.statusPage
-            );
-            if (statusPageNotifications.length !== 1) {
-              core.setFailed(
-                'Expected exactly one status page reporting descriptor for this diagnostic in the ' +
-                  `'runs[].invocations[].toolExecutionNotifications[]' SARIF property, but found ` +
-                  `${statusPageNotifications.length}. All notification reporting descriptors: ` +
-                  `${JSON.stringify(toolExecutionNotifications)}.`
-              );
-            }
-    env:
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__go-indirect-tracing-workaround.yml

@@ -1,104 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: 'PR Check - Go: workaround for indirect tracing'
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs:
-      go-version:
-        type: string
-        description: The version of Go to install
-        required: false
-        default: '>=1.21.0'
-  workflow_call:
-    inputs:
-      go-version:
-        type: string
-        description: The version of Go to install
-        required: false
-        default: '>=1.21.0'
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: go-indirect-tracing-workaround-${{github.ref}}-${{inputs.go-version}}
-jobs:
-  go-indirect-tracing-workaround:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: default
-    name: 'Go: workaround for indirect tracing'
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Install Go
-        uses: actions/setup-go@b7ad1dad31e06c5925ef5d2fc7ad053ef454303e # v7.0.0
-        with:
-          go-version: ${{ inputs.go-version || '>=1.21.0' }}
-          cache: false
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - uses: ./../action/init
-        with:
-          languages: go
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - name: Build code
-        run: go build main.go
-      - uses: ./../action/analyze
-      - run: |
-          if [[ -z "${CODEQL_ACTION_GO_BINARY}" ]]; then
-            echo "Expected the workaround for indirect tracing of static binaries to trigger, but the" \
-              "CODEQL_ACTION_GO_BINARY environment variable is not set."
-            exit 1
-          fi
-          if [[ ! -f "${CODEQL_ACTION_GO_BINARY}" ]]; then
-            echo "CODEQL_ACTION_GO_BINARY is set, but the corresponding script does not exist."
-            exit 1
-          fi
-
-
-          # Once we start running Bash 4.2 in all environments, we can replace the
-          # `! -z` flag with the more elegant `-v` which confirms that the variable
-          # is actually unset and not potentially set to a blank value.
-          if [[ ! -z "${CODEQL_ACTION_DID_AUTOBUILD_GOLANG}" ]]; then
-            echo "Expected the Go autobuilder not to be run, but the" \
-              "CODEQL_ACTION_DID_AUTOBUILD_GOLANG environment variable was set."
-            exit 1
-          fi
-          cd "$RUNNER_TEMP/codeql_databases"
-          if [[ ! -d go ]]; then
-            echo "Did not find a Go database"
-            exit 1
-          fi
-    env:
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__go-tracing-autobuilder.yml

@@ -1,110 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: 'PR Check - Go: tracing with autobuilder step'
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs:
-      go-version:
-        type: string
-        description: The version of Go to install
-        required: false
-        default: '>=1.21.0'
-  workflow_call:
-    inputs:
-      go-version:
-        type: string
-        description: The version of Go to install
-        required: false
-        default: '>=1.21.0'
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: go-tracing-autobuilder-${{github.ref}}-${{inputs.go-version}}
-jobs:
-  go-tracing-autobuilder:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: stable-v2.19.4
-          - os: ubuntu-latest
-            version: stable-v2.20.7
-          - os: ubuntu-latest
-            version: stable-v2.21.4
-          - os: ubuntu-latest
-            version: stable-v2.22.4
-          - os: ubuntu-latest
-            version: stable-v2.23.9
-          - os: ubuntu-latest
-            version: stable-v2.24.3
-          - os: ubuntu-latest
-            version: default
-          - os: ubuntu-latest
-            version: linked
-          - os: macos-latest
-            version: linked
-          - os: ubuntu-latest
-            version: nightly-latest
-          - os: macos-latest
-            version: nightly-latest
-    name: 'Go: tracing with autobuilder step'
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Install Go
-        uses: actions/setup-go@b7ad1dad31e06c5925ef5d2fc7ad053ef454303e # v7.0.0
-        with:
-          go-version: ${{ inputs.go-version || '>=1.21.0' }}
-          cache: false
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - uses: ./../action/init
-        with:
-          languages: go
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - uses: ./../action/autobuild
-      - uses: ./../action/analyze
-      - run: |
-          if [[ "${CODEQL_ACTION_DID_AUTOBUILD_GOLANG}" != true ]]; then
-            echo "Expected the Go autobuilder to be run, but the" \
-              "CODEQL_ACTION_DID_AUTOBUILD_GOLANG environment variable was not true."
-            exit 1
-          fi
-          cd "$RUNNER_TEMP/codeql_databases"
-          if [[ ! -d go ]]; then
-            echo "Did not find a Go database"
-            exit 1
-          fi
-    env:
-      DOTNET_GENERATE_ASPNET_CERTIFICATE: 'false'
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__go-tracing-custom-build-steps.yml

@@ -1,113 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: 'PR Check - Go: tracing with custom build steps'
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs:
-      go-version:
-        type: string
-        description: The version of Go to install
-        required: false
-        default: '>=1.21.0'
-  workflow_call:
-    inputs:
-      go-version:
-        type: string
-        description: The version of Go to install
-        required: false
-        default: '>=1.21.0'
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: go-tracing-custom-build-steps-${{github.ref}}-${{inputs.go-version}}
-jobs:
-  go-tracing-custom-build-steps:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: stable-v2.19.4
-          - os: ubuntu-latest
-            version: stable-v2.20.7
-          - os: ubuntu-latest
-            version: stable-v2.21.4
-          - os: ubuntu-latest
-            version: stable-v2.22.4
-          - os: ubuntu-latest
-            version: stable-v2.23.9
-          - os: ubuntu-latest
-            version: stable-v2.24.3
-          - os: ubuntu-latest
-            version: default
-          - os: ubuntu-latest
-            version: linked
-          - os: macos-latest
-            version: linked
-          - os: ubuntu-latest
-            version: nightly-latest
-          - os: macos-latest
-            version: nightly-latest
-    name: 'Go: tracing with custom build steps'
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Install Go
-        uses: actions/setup-go@b7ad1dad31e06c5925ef5d2fc7ad053ef454303e # v7.0.0
-        with:
-          go-version: ${{ inputs.go-version || '>=1.21.0' }}
-          cache: false
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - uses: ./../action/init
-        with:
-          languages: go
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - name: Build code
-        run: go build main.go
-      - uses: ./../action/analyze
-      - run: |
-          # Once we start running Bash 4.2 in all environments, we can replace the
-          # `! -z` flag with the more elegant `-v` which confirms that the variable
-          # is actually unset and not potentially set to a blank value.
-          if [[ ! -z "${CODEQL_ACTION_DID_AUTOBUILD_GOLANG}" ]]; then
-            echo "Expected the Go autobuilder not to be run, but the" \
-              "CODEQL_ACTION_DID_AUTOBUILD_GOLANG environment variable was set."
-            exit 1
-          fi
-          cd "$RUNNER_TEMP/codeql_databases"
-          if [[ ! -d go ]]; then
-            echo "Did not find a Go database"
-            exit 1
-          fi
-    env:
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__go-tracing-legacy-workflow.yml

@@ -1,104 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: 'PR Check - Go: tracing with legacy workflow'
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs:
-      go-version:
-        type: string
-        description: The version of Go to install
-        required: false
-        default: '>=1.21.0'
-  workflow_call:
-    inputs:
-      go-version:
-        type: string
-        description: The version of Go to install
-        required: false
-        default: '>=1.21.0'
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: go-tracing-legacy-workflow-${{github.ref}}-${{inputs.go-version}}
-jobs:
-  go-tracing-legacy-workflow:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: stable-v2.19.4
-          - os: ubuntu-latest
-            version: stable-v2.20.7
-          - os: ubuntu-latest
-            version: stable-v2.21.4
-          - os: ubuntu-latest
-            version: stable-v2.22.4
-          - os: ubuntu-latest
-            version: stable-v2.23.9
-          - os: ubuntu-latest
-            version: stable-v2.24.3
-          - os: ubuntu-latest
-            version: default
-          - os: ubuntu-latest
-            version: linked
-          - os: macos-latest
-            version: linked
-          - os: ubuntu-latest
-            version: nightly-latest
-          - os: macos-latest
-            version: nightly-latest
-    name: 'Go: tracing with legacy workflow'
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Install Go
-        uses: actions/setup-go@b7ad1dad31e06c5925ef5d2fc7ad053ef454303e # v7.0.0
-        with:
-          go-version: ${{ inputs.go-version || '>=1.21.0' }}
-          cache: false
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - uses: ./../action/init
-        with:
-          languages: go
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - uses: ./../action/analyze
-      - run: |
-          cd "$RUNNER_TEMP/codeql_databases"
-          if [[ ! -d go ]]; then
-            echo "Did not find a Go database"
-            exit 1
-          fi
-    env:
-      DOTNET_GENERATE_ASPNET_CERTIFICATE: 'false'
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__init-with-registries.yml

@@ -1,119 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: 'PR Check - Packaging: Download using registries'
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs: {}
-  workflow_call:
-    inputs: {}
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: init-with-registries-${{github.ref}}
-jobs:
-  init-with-registries:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: default
-          - os: ubuntu-latest
-            version: linked
-          - os: ubuntu-latest
-            version: nightly-latest
-    name: 'Packaging: Download using registries'
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      packages: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Init with registries
-        uses: ./../action/init
-        with:
-          db-location: '${{ runner.temp }}/customDbLocation'
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-          config-file: ./.github/codeql/codeql-config-registries.yml
-          languages: javascript
-          registries: |
-            - url: "https://ghcr.io/v2/"
-              packages: "*/*"
-              token: "${{ secrets.GITHUB_TOKEN }}"
-
-      - name: Verify packages installed
-        run: |
-          PRIVATE_PACK="$HOME/.codeql/packages/codeql-testing/private-pack"
-          CODEQL_PACK1="$HOME/.codeql/packages/codeql-testing/codeql-pack1"
-
-          if [[ -d $PRIVATE_PACK ]]
-          then
-              echo "$PRIVATE_PACK was installed."
-          else
-              echo "::error $PRIVATE_PACK pack was not installed."
-              exit 1
-          fi
-
-          if [[ -d $CODEQL_PACK1 ]]
-          then
-              echo "$CODEQL_PACK1 was installed."
-          else
-              echo "::error $CODEQL_PACK1 pack was not installed."
-              exit 1
-          fi
-
-      - name: Verify qlconfig.yml file was created
-        run: |
-          QLCONFIG_PATH=$RUNNER_TEMP/qlconfig.yml
-          echo "Expected qlconfig.yml file to be created at $QLCONFIG_PATH"
-          if [[ -f $QLCONFIG_PATH ]]
-          then
-              echo "qlconfig.yml file was created."
-          else
-              echo "::error qlconfig.yml file was not created."
-              exit 1
-          fi
-
-      - name: Verify contents of qlconfig.yml
-        run: |
-          QLCONFIG_PATH=$RUNNER_TEMP/qlconfig.yml
-          cat $QLCONFIG_PATH | yq -e '.registries[] | select(.url == "https://ghcr.io/v2/") | select(.packages == "*/*")'
-          if [[ $? -eq 0 ]]
-          then
-              echo "Registry was added to qlconfig.yml file."
-          else
-              echo "::error Registry was not added to qlconfig.yml file."
-              echo "Contents of qlconfig.yml file:"
-              cat $QLCONFIG_PATH
-              exit 1
-          fi
-    env:
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__javascript-source-root.yml

@@ -1,80 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: PR Check - Custom source root
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs: {}
-  workflow_call:
-    inputs: {}
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: javascript-source-root-${{github.ref}}
-jobs:
-  javascript-source-root:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: linked
-          - os: ubuntu-latest
-            version: default
-          - os: ubuntu-latest
-            version: nightly-latest
-    name: Custom source root
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Move codeql-action
-        run: |
-          mkdir ../new-source-root
-          mv * ../new-source-root
-      - uses: ./../action/init
-        with:
-          languages: javascript
-          source-root: ../new-source-root
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - uses: ./../action/analyze
-        with:
-          skip-queries: true
-      - name: Assert database exists
-        run: |
-          cd "$RUNNER_TEMP/codeql_databases"
-          if [[ ! -d javascript ]]; then
-            echo "Did not find a JavaScript database"
-            exit 1
-          fi
-    env:
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__job-run-uuid-sarif.yml

@@ -1,81 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: PR Check - Job run UUID added to SARIF
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs: {}
-  workflow_call:
-    inputs: {}
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: job-run-uuid-sarif-${{github.ref}}
-jobs:
-  job-run-uuid-sarif:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: nightly-latest
-    name: Job run UUID added to SARIF
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - uses: ./../action/init
-        id: init
-        with:
-          languages: javascript
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - uses: ./../action/analyze
-        with:
-          output: '${{ runner.temp }}/results'
-      - name: Upload SARIF
-        uses: actions/upload-artifact@043fb46d1a93c77aae656e7c1c64a875d1fc6a0a # v7.0.1
-        with:
-          name: ${{ matrix.os }}-${{ matrix.version }}.sarif.json
-          path: '${{ runner.temp }}/results/javascript.sarif'
-          retention-days: 7
-      - name: Check results
-        run: |
-          cd "$RUNNER_TEMP/results"
-          actual=$(jq -r '.runs[0].properties.jobRunUuid' javascript.sarif)
-          if [[ "$actual" != "$CODEQL_ACTION_JOB_RUN_UUID" ]]; then
-            echo "Expected SARIF output to contain job run UUID '$CODEQL_ACTION_JOB_RUN_UUID', but found '$actual'."
-            exit 1
-          else
-            echo "Found job run UUID '$actual'."
-          fi
-    env:
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__language-aliases.yml

@@ -1,72 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: PR Check - Language aliases
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs: {}
-  workflow_call:
-    inputs: {}
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: language-aliases-${{github.ref}}
-jobs:
-  language-aliases:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: linked
-    name: Language aliases
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - uses: ./../action/init
-        with:
-          languages: C#,java-kotlin,typescript
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-
-      - name: 'Check languages'
-        run: |
-          expected_languages="csharp,java,javascript"
-          actual_languages=$(jq -r '.languages | join(",")' "$RUNNER_TEMP"/config)
-
-          if [ "$expected_languages" != "$actual_languages" ]; then
-            echo "Resolved languages did not match expected list. " \
-              "Expected languages: $expected_languages. Actual languages: $actual_languages."
-            exit 1
-          fi
-    env:
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__linux-arm64.yml

@@ -1,106 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: PR Check - Linux Arm64
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs:
-      dotnet-version:
-        type: string
-        description: The version of .NET to install
-        required: false
-        default: 9.x
-      go-version:
-        type: string
-        description: The version of Go to install
-        required: false
-        default: '>=1.21.0'
-  workflow_call:
-    inputs:
-      dotnet-version:
-        type: string
-        description: The version of .NET to install
-        required: false
-        default: 9.x
-      go-version:
-        type: string
-        description: The version of Go to install
-        required: false
-        default: '>=1.21.0'
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: linux-arm64-${{github.ref}}-${{inputs.dotnet-version}}-${{inputs.go-version}}
-jobs:
-  linux-arm64:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-24.04-arm
-            version: nightly-latest
-    name: Linux Arm64
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Install .NET
-        uses: actions/setup-dotnet@a98b56852c35b8e3190ac28c8c2271da59106c68 # v6.0.0
-        with:
-          dotnet-version: ${{ inputs.dotnet-version || '9.x' }}
-      - name: Install Go
-        uses: actions/setup-go@b7ad1dad31e06c5925ef5d2fc7ad053ef454303e # v7.0.0
-        with:
-          go-version: ${{ inputs.go-version || '>=1.21.0' }}
-          cache: false
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - uses: ./../action/init
-        with:
-          languages: ${{ env.LANGUAGES }}
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - name: Build code
-        run: ./build.sh
-      - uses: ./../action/analyze
-        with:
-          upload-database: false
-      - name: Assert databases exist
-        run: |
-          cd "$RUNNER_TEMP/codeql_databases"
-          for lang in ${LANGUAGES//,/ }; do
-            if [[ ! -d "$lang" ]]; then
-              echo "Did not find a database for $lang"
-              exit 1
-            fi
-            echo "Found database for $lang"
-          done
-    env:
-      LANGUAGES: cpp,csharp,go,java,javascript,python,ruby
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__local-bundle.yml

@@ -1,98 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: PR Check - Local CodeQL bundle
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs:
-      dotnet-version:
-        type: string
-        description: The version of .NET to install
-        required: false
-        default: 9.x
-      go-version:
-        type: string
-        description: The version of Go to install
-        required: false
-        default: '>=1.21.0'
-  workflow_call:
-    inputs:
-      dotnet-version:
-        type: string
-        description: The version of .NET to install
-        required: false
-        default: 9.x
-      go-version:
-        type: string
-        description: The version of Go to install
-        required: false
-        default: '>=1.21.0'
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: local-bundle-${{github.ref}}-${{inputs.dotnet-version}}-${{inputs.go-version}}
-jobs:
-  local-bundle:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: linked
-    name: Local CodeQL bundle
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Install .NET
-        uses: actions/setup-dotnet@a98b56852c35b8e3190ac28c8c2271da59106c68 # v6.0.0
-        with:
-          dotnet-version: ${{ inputs.dotnet-version || '9.x' }}
-      - name: Install Go
-        uses: actions/setup-go@b7ad1dad31e06c5925ef5d2fc7ad053ef454303e # v7.0.0
-        with:
-          go-version: ${{ inputs.go-version || '>=1.21.0' }}
-          cache: false
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Fetch latest CodeQL bundle
-        run: |
-          wget https://github.com/github/codeql-action/releases/latest/download/codeql-bundle-linux64.tar.zst
-      - id: init
-        uses: ./../action/init
-        with:
-          # Swift is not supported on Ubuntu so we manually exclude it from the list here
-          languages: cpp,csharp,go,java,javascript,python,ruby
-          tools: ./codeql-bundle-linux64.tar.zst
-      - name: Build code
-        run: ./build.sh
-      - uses: ./../action/analyze
-    env:
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__multi-language-autodetect.yml

@@ -1,197 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: PR Check - Multi-language repository
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs:
-      dotnet-version:
-        type: string
-        description: The version of .NET to install
-        required: false
-        default: 9.x
-      go-version:
-        type: string
-        description: The version of Go to install
-        required: false
-        default: '>=1.21.0'
-  workflow_call:
-    inputs:
-      dotnet-version:
-        type: string
-        description: The version of .NET to install
-        required: false
-        default: 9.x
-      go-version:
-        type: string
-        description: The version of Go to install
-        required: false
-        default: '>=1.21.0'
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: multi-language-autodetect-${{github.ref}}-${{inputs.dotnet-version}}-${{inputs.go-version}}
-jobs:
-  multi-language-autodetect:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: stable-v2.19.4
-          - os: macos-15-xlarge
-            version: stable-v2.19.4
-          - os: ubuntu-latest
-            version: stable-v2.20.7
-          - os: macos-15-xlarge
-            version: stable-v2.20.7
-          - os: ubuntu-latest
-            version: stable-v2.21.4
-          - os: macos-15-xlarge
-            version: stable-v2.21.4
-          - os: ubuntu-latest
-            version: stable-v2.22.4
-          - os: macos-15-xlarge
-            version: stable-v2.22.4
-          - os: ubuntu-latest
-            version: stable-v2.23.9
-          - os: macos-latest-xlarge
-            version: stable-v2.23.9
-          - os: ubuntu-latest
-            version: stable-v2.24.3
-          - os: macos-latest-xlarge
-            version: stable-v2.24.3
-          - os: ubuntu-latest
-            version: default
-          - os: macos-latest-xlarge
-            version: default
-          - os: ubuntu-latest
-            version: linked
-          - os: macos-latest-xlarge
-            version: linked
-          - os: ubuntu-latest
-            version: nightly-latest
-          - os: macos-latest-xlarge
-            version: nightly-latest
-    name: Multi-language repository
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Install .NET
-        uses: actions/setup-dotnet@a98b56852c35b8e3190ac28c8c2271da59106c68 # v6.0.0
-        with:
-          dotnet-version: ${{ inputs.dotnet-version || '9.x' }}
-      - name: Install Go
-        uses: actions/setup-go@b7ad1dad31e06c5925ef5d2fc7ad053ef454303e # v7.0.0
-        with:
-          go-version: ${{ inputs.go-version || '>=1.21.0' }}
-          cache: false
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Install Python 3.13.15 for older CLI versions
-        # Older CLI versions don't work with Python 3.13.16 or newer because their Python extractor
-        # imports `importlib._bootstrap._ERR_MSG`, which those Python versions no longer define.
-        # See https://github.com/github/codeql-action/pull/3212
-        if: matrix.version != 'nightly-latest' && matrix.version != 'linked'
-        uses: actions/setup-python@5fda3b95a4ea91299a34e894583c3862153e4b97 # v7.0.0
-        with:
-          python-version: '3.13.15'
-
-      - name: Use Xcode 16
-        # Only the older CodeQL CLI versions need Xcode 16, and these run on macOS 15.
-        if: matrix.os == 'macos-15-xlarge'
-        run: sudo xcode-select -s "/Applications/Xcode_16.app"
-
-      - uses: ./../action/init
-        id: init
-        with:
-          db-location: '${{ runner.temp }}/customDbLocation'
-          languages: ${{ runner.os == 'Linux' && 'cpp,csharp,go,java,javascript,python,ruby' || '' }}
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-
-      - name: Build code
-        run: ./build.sh
-
-      - uses: ./../action/analyze
-        id: analysis
-        with:
-          upload-database: false
-
-      - name: Check language autodetect for all languages excluding Swift
-        run: |
-          CPP_DB=${{ fromJson(steps.analysis.outputs.db-locations).cpp }}
-          if [[ ! -d $CPP_DB ]] || [[ ! $CPP_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
-            echo "Did not create a database for CPP, or created it in the wrong location."
-            exit 1
-          fi
-          CSHARP_DB=${{ fromJson(steps.analysis.outputs.db-locations).csharp }}
-          if [[ ! -d $CSHARP_DB ]] || [[ ! $CSHARP_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
-            echo "Did not create a database for C Sharp, or created it in the wrong location."
-            exit 1
-          fi
-          GO_DB=${{ fromJson(steps.analysis.outputs.db-locations).go }}
-          if [[ ! -d $GO_DB ]] || [[ ! $GO_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
-            echo "Did not create a database for Go, or created it in the wrong location."
-            exit 1
-          fi
-          JAVA_DB=${{ fromJson(steps.analysis.outputs.db-locations).java }}
-          if [[ ! -d $JAVA_DB ]] || [[ ! $JAVA_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
-            echo "Did not create a database for Java, or created it in the wrong location."
-            exit 1
-          fi
-          JAVASCRIPT_DB=${{ fromJson(steps.analysis.outputs.db-locations).javascript }}
-          if [[ ! -d $JAVASCRIPT_DB ]] || [[ ! $JAVASCRIPT_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
-            echo "Did not create a database for Javascript, or created it in the wrong location."
-            exit 1
-          fi
-          PYTHON_DB=${{ fromJson(steps.analysis.outputs.db-locations).python }}
-          if [[ ! -d $PYTHON_DB ]] || [[ ! $PYTHON_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
-            echo "Did not create a database for Python, or created it in the wrong location."
-            exit 1
-          fi
-          RUBY_DB=${{ fromJson(steps.analysis.outputs.db-locations).ruby }}
-          if [[ ! -d $RUBY_DB ]] || [[ ! $RUBY_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
-            echo "Did not create a database for Ruby, or created it in the wrong location."
-            exit 1
-          fi
-
-      - name: Check language autodetect for Swift on macOS
-        if: runner.os == 'macOS'
-        run: |
-          SWIFT_DB=${{ fromJson(steps.analysis.outputs.db-locations).swift }}
-          if [[ ! -d $SWIFT_DB ]] || [[ ! $SWIFT_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
-            echo "Did not create a database for Swift, or created it in the wrong location."
-            exit 1
-          fi
-    env:
-      CODEQL_ACTION_CLEANUP_TOOLCACHE_BUNDLES: true
-      CODEQL_ACTION_RESOLVE_SUPPORTED_LANGUAGES_USING_CLI: true
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__overlay-init-fallback.yml

@@ -1,76 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: PR Check - Overlay database init fallback
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs: {}
-  workflow_call:
-    inputs: {}
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: overlay-init-fallback-${{github.ref}}
-jobs:
-  overlay-init-fallback:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: linked
-          - os: ubuntu-latest
-            version: nightly-latest
-    name: Overlay database init fallback
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - uses: ./../action/init
-        with:
-          languages: actions # Any language without overlay support will do
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-        env:
-          CODEQL_OVERLAY_DATABASE_MODE: overlay-base
-      - uses: ./../action/analyze
-        id: analysis
-        with:
-          upload-database: false
-      - name: Check database
-        run: |
-          cd "$RUNNER_TEMP/codeql_databases/actions"
-          if ! grep -q 'overlayBaseDatabase: false' codeql-database.yml ; then
-            echo "This test needs to be updated to use a non-overlay language."
-            exit 1
-          fi
-    env:
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__packaging-codescanning-config-inputs-js.yml

@@ -1,132 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: 'PR Check - Packaging: Config and input passed to the CLI'
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs:
-      dotnet-version:
-        type: string
-        description: The version of .NET to install
-        required: false
-        default: 9.x
-      go-version:
-        type: string
-        description: The version of Go to install
-        required: false
-        default: '>=1.21.0'
-  workflow_call:
-    inputs:
-      dotnet-version:
-        type: string
-        description: The version of .NET to install
-        required: false
-        default: 9.x
-      go-version:
-        type: string
-        description: The version of Go to install
-        required: false
-        default: '>=1.21.0'
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: packaging-codescanning-config-inputs-js-${{github.ref}}-${{inputs.dotnet-version}}-${{inputs.go-version}}
-jobs:
-  packaging-codescanning-config-inputs-js:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: linked
-          - os: ubuntu-latest
-            version: default
-          - os: ubuntu-latest
-            version: nightly-latest
-    name: 'Packaging: Config and input passed to the CLI'
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Install .NET
-        uses: actions/setup-dotnet@a98b56852c35b8e3190ac28c8c2271da59106c68 # v6.0.0
-        with:
-          dotnet-version: ${{ inputs.dotnet-version || '9.x' }}
-      - name: Install Go
-        uses: actions/setup-go@b7ad1dad31e06c5925ef5d2fc7ad053ef454303e # v7.0.0
-        with:
-          go-version: ${{ inputs.go-version || '>=1.21.0' }}
-          cache: false
-      - name: Install Node.js
-        uses: actions/setup-node@820762786026740c76f36085b0efc47a31fe5020 # v7.0.0
-        with:
-          node-version: 20.x
-          cache: npm
-      - name: Install newer npm
-        run: npm install -g npm@11.19.1
-      - name: Install dependencies
-        run: npm ci
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - uses: ./../action/init
-        with:
-          config-file: '.github/codeql/codeql-config-packaging3.yml'
-          packs: +codeql-testing/codeql-pack1@1.0.0
-          languages: javascript
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - name: Build code
-        run: ./build.sh
-      - uses: ./../action/analyze
-        with:
-          output: '${{ runner.temp }}/results'
-          upload-database: false
-
-      - name: Check results
-        uses: ./../action/.github/actions/check-sarif
-        with:
-          sarif-file: ${{ runner.temp }}/results/javascript.sarif
-          queries-run: javascript/example/empty-or-one-block,javascript/example/empty-or-one-block,javascript/example/other-query-block,javascript/example/two-block
-          queries-not-run: foo,bar
-
-      - name: Assert Results
-        run: |
-          cd "$RUNNER_TEMP/results"
-          # We should have 4 hits from these rules
-          EXPECTED_RULES="javascript/example/empty-or-one-block javascript/example/empty-or-one-block javascript/example/other-query-block javascript/example/two-block"
-
-          # use tr to replace newlines with spaces and xargs to trim leading and trailing whitespace
-          RULES="$(cat javascript.sarif | jq -r '.runs[0].results[].ruleId' | sort | tr "\n\r" " " | xargs)"
-          echo "Found matching rules '$RULES'"
-          if [ "$RULES" != "$EXPECTED_RULES" ]; then
-            echo "Did not match expected rules '$EXPECTED_RULES'."
-            exit 1
-          fi
-    env:
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__packaging-config-inputs-js.yml

@@ -1,132 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: 'PR Check - Packaging: Config and input'
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs:
-      dotnet-version:
-        type: string
-        description: The version of .NET to install
-        required: false
-        default: 9.x
-      go-version:
-        type: string
-        description: The version of Go to install
-        required: false
-        default: '>=1.21.0'
-  workflow_call:
-    inputs:
-      dotnet-version:
-        type: string
-        description: The version of .NET to install
-        required: false
-        default: 9.x
-      go-version:
-        type: string
-        description: The version of Go to install
-        required: false
-        default: '>=1.21.0'
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: packaging-config-inputs-js-${{github.ref}}-${{inputs.dotnet-version}}-${{inputs.go-version}}
-jobs:
-  packaging-config-inputs-js:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: linked
-          - os: ubuntu-latest
-            version: default
-          - os: ubuntu-latest
-            version: nightly-latest
-    name: 'Packaging: Config and input'
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Install .NET
-        uses: actions/setup-dotnet@a98b56852c35b8e3190ac28c8c2271da59106c68 # v6.0.0
-        with:
-          dotnet-version: ${{ inputs.dotnet-version || '9.x' }}
-      - name: Install Go
-        uses: actions/setup-go@b7ad1dad31e06c5925ef5d2fc7ad053ef454303e # v7.0.0
-        with:
-          go-version: ${{ inputs.go-version || '>=1.21.0' }}
-          cache: false
-      - name: Install Node.js
-        uses: actions/setup-node@820762786026740c76f36085b0efc47a31fe5020 # v7.0.0
-        with:
-          node-version: 20.x
-          cache: npm
-      - name: Install newer npm
-        run: npm install -g npm@11.19.1
-      - name: Install dependencies
-        run: npm ci
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - uses: ./../action/init
-        with:
-          config-file: '.github/codeql/codeql-config-packaging3.yml'
-          packs: +codeql-testing/codeql-pack1@1.0.0
-          languages: javascript
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - name: Build code
-        run: ./build.sh
-      - uses: ./../action/analyze
-        with:
-          output: '${{ runner.temp }}/results'
-          upload-database: false
-
-      - name: Check results
-        uses: ./../action/.github/actions/check-sarif
-        with:
-          sarif-file: ${{ runner.temp }}/results/javascript.sarif
-          queries-run: javascript/example/empty-or-one-block,javascript/example/empty-or-one-block,javascript/example/other-query-block,javascript/example/two-block
-          queries-not-run: foo,bar
-
-      - name: Assert Results
-        run: |
-          cd "$RUNNER_TEMP/results"
-          # We should have 4 hits from these rules
-          EXPECTED_RULES="javascript/example/empty-or-one-block javascript/example/empty-or-one-block javascript/example/other-query-block javascript/example/two-block"
-
-          # use tr to replace newlines with spaces and xargs to trim leading and trailing whitespace
-          RULES="$(cat javascript.sarif | jq -r '.runs[0].results[].ruleId' | sort | tr "\n\r" " " | xargs)"
-          echo "Found matching rules '$RULES'"
-          if [ "$RULES" != "$EXPECTED_RULES" ]; then
-            echo "Did not match expected rules '$EXPECTED_RULES'."
-            exit 1
-          fi
-    env:
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__packaging-config-js.yml

@@ -1,131 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: 'PR Check - Packaging: Config file'
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs:
-      dotnet-version:
-        type: string
-        description: The version of .NET to install
-        required: false
-        default: 9.x
-      go-version:
-        type: string
-        description: The version of Go to install
-        required: false
-        default: '>=1.21.0'
-  workflow_call:
-    inputs:
-      dotnet-version:
-        type: string
-        description: The version of .NET to install
-        required: false
-        default: 9.x
-      go-version:
-        type: string
-        description: The version of Go to install
-        required: false
-        default: '>=1.21.0'
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: packaging-config-js-${{github.ref}}-${{inputs.dotnet-version}}-${{inputs.go-version}}
-jobs:
-  packaging-config-js:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: linked
-          - os: ubuntu-latest
-            version: default
-          - os: ubuntu-latest
-            version: nightly-latest
-    name: 'Packaging: Config file'
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Install .NET
-        uses: actions/setup-dotnet@a98b56852c35b8e3190ac28c8c2271da59106c68 # v6.0.0
-        with:
-          dotnet-version: ${{ inputs.dotnet-version || '9.x' }}
-      - name: Install Go
-        uses: actions/setup-go@b7ad1dad31e06c5925ef5d2fc7ad053ef454303e # v7.0.0
-        with:
-          go-version: ${{ inputs.go-version || '>=1.21.0' }}
-          cache: false
-      - name: Install Node.js
-        uses: actions/setup-node@820762786026740c76f36085b0efc47a31fe5020 # v7.0.0
-        with:
-          node-version: 20.x
-          cache: npm
-      - name: Install newer npm
-        run: npm install -g npm@11.19.1
-      - name: Install dependencies
-        run: npm ci
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - uses: ./../action/init
-        with:
-          config-file: '.github/codeql/codeql-config-packaging.yml'
-          languages: javascript
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - name: Build code
-        run: ./build.sh
-      - uses: ./../action/analyze
-        with:
-          output: '${{ runner.temp }}/results'
-          upload-database: false
-
-      - name: Check results
-        uses: ./../action/.github/actions/check-sarif
-        with:
-          sarif-file: ${{ runner.temp }}/results/javascript.sarif
-          queries-run: javascript/example/empty-or-one-block,javascript/example/empty-or-one-block,javascript/example/other-query-block,javascript/example/two-block
-          queries-not-run: foo,bar
-
-      - name: Assert Results
-        run: |
-          cd "$RUNNER_TEMP/results"
-          # We should have 4 hits from these rules
-          EXPECTED_RULES="javascript/example/empty-or-one-block javascript/example/empty-or-one-block javascript/example/other-query-block javascript/example/two-block"
-
-          # use tr to replace newlines with spaces and xargs to trim leading and trailing whitespace
-          RULES="$(cat javascript.sarif | jq -r '.runs[0].results[].ruleId' | sort | tr "\n\r" " " | xargs)"
-          echo "Found matching rules '$RULES'"
-          if [ "$RULES" != "$EXPECTED_RULES" ]; then
-            echo "Did not match expected rules '$EXPECTED_RULES'."
-            exit 1
-          fi
-    env:
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__packaging-inputs-js.yml

@@ -1,131 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: 'PR Check - Packaging: Action input'
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs:
-      dotnet-version:
-        type: string
-        description: The version of .NET to install
-        required: false
-        default: 9.x
-      go-version:
-        type: string
-        description: The version of Go to install
-        required: false
-        default: '>=1.21.0'
-  workflow_call:
-    inputs:
-      dotnet-version:
-        type: string
-        description: The version of .NET to install
-        required: false
-        default: 9.x
-      go-version:
-        type: string
-        description: The version of Go to install
-        required: false
-        default: '>=1.21.0'
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: packaging-inputs-js-${{github.ref}}-${{inputs.dotnet-version}}-${{inputs.go-version}}
-jobs:
-  packaging-inputs-js:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: linked
-          - os: ubuntu-latest
-            version: default
-          - os: ubuntu-latest
-            version: nightly-latest
-    name: 'Packaging: Action input'
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Install .NET
-        uses: actions/setup-dotnet@a98b56852c35b8e3190ac28c8c2271da59106c68 # v6.0.0
-        with:
-          dotnet-version: ${{ inputs.dotnet-version || '9.x' }}
-      - name: Install Go
-        uses: actions/setup-go@b7ad1dad31e06c5925ef5d2fc7ad053ef454303e # v7.0.0
-        with:
-          go-version: ${{ inputs.go-version || '>=1.21.0' }}
-          cache: false
-      - name: Install Node.js
-        uses: actions/setup-node@820762786026740c76f36085b0efc47a31fe5020 # v7.0.0
-        with:
-          node-version: 20.x
-          cache: npm
-      - name: Install newer npm
-        run: npm install -g npm@11.19.1
-      - name: Install dependencies
-        run: npm ci
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - uses: ./../action/init
-        with:
-          config-file: '.github/codeql/codeql-config-packaging2.yml'
-          languages: javascript
-          packs: codeql-testing/codeql-pack1@1.0.0, codeql-testing/codeql-pack2, codeql-testing/codeql-pack3:other-query.ql
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - name: Build code
-        run: ./build.sh
-      - uses: ./../action/analyze
-        with:
-          output: '${{ runner.temp }}/results'
-
-      - name: Check results
-        uses: ./../action/.github/actions/check-sarif
-        with:
-          sarif-file: ${{ runner.temp }}/results/javascript.sarif
-          queries-run: javascript/example/empty-or-one-block,javascript/example/empty-or-one-block,javascript/example/other-query-block,javascript/example/two-block
-          queries-not-run: foo,bar
-
-      - name: Assert Results
-        run: |
-          cd "$RUNNER_TEMP/results"
-          # We should have 4 hits from these rules
-          EXPECTED_RULES="javascript/example/empty-or-one-block javascript/example/empty-or-one-block javascript/example/other-query-block javascript/example/two-block"
-
-          # use tr to replace newlines with spaces and xargs to trim leading and trailing whitespace
-          RULES="$(cat javascript.sarif | jq -r '.runs[0].results[].ruleId' | sort | tr "\n\r" " " | xargs)"
-          echo "Found matching rules '$RULES'"
-          if [ "$RULES" != "$EXPECTED_RULES" ]; then
-            echo "Did not match expected rules '$EXPECTED_RULES'."
-            exit 1
-          fi
-    env:
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__per-language-bundle-validation.yml

@@ -1,164 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: PR Check - Per-language bundles
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs: {}
-  workflow_call:
-    inputs: {}
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: per-language-bundle-validation-${{github.ref}}
-jobs:
-  per-language-bundle-validation:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - language: actions
-            os: ubuntu-latest
-            version: nightly-latest
-            expected-extractors: actions javascript
-          - language: cpp
-            os: ubuntu-latest
-            version: nightly-latest
-            build-mode: manual
-            build-command: gcc -o main main.c
-          - language: csharp
-            os: ubuntu-latest
-            version: nightly-latest
-            build-mode: none
-          - language: go
-            os: ubuntu-latest
-            version: nightly-latest
-            build-mode: autobuild
-          - language: java
-            os: ubuntu-latest
-            version: nightly-latest
-            build-mode: none
-          - language: javascript
-            os: ubuntu-latest
-            version: nightly-latest
-          - language: python
-            os: ubuntu-latest
-            version: nightly-latest
-          - language: ruby
-            os: ubuntu-latest
-            version: nightly-latest
-          - language: rust
-            os: ubuntu-latest
-            version: nightly-latest
-          - language: swift
-            os: macos-latest-xlarge
-            version: nightly-latest
-            build-mode: autobuild
-    name: Per-language bundles
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - uses: ./../action/init
-        id: init
-        with:
-          languages: ${{ matrix.language }}
-          build-mode: ${{ matrix['build-mode'] }}
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - name: Check that the bundle contains only the expected extractors
-        env:
-          CODEQL_PATH: ${{ steps.init.outputs.codeql-path }}
-          LANGUAGE: ${{ matrix.language }}
-          EXPECTED_EXTRACTORS: ${{ matrix['expected-extractors'] || matrix.language }}
-        run: |
-          extractors="$("$CODEQL_PATH" resolve languages --format=json | jq -r 'keys[]')"
-          echo "Extractors in the bundle:"
-          echo "$extractors"
-          echo "Expected: $EXPECTED_EXTRACTORS"
-
-          for expected in $EXPECTED_EXTRACTORS; do
-            if ! echo "$extractors" | grep -qx "$expected"; then
-              echo "::error::The ${LANGUAGE} bundle does not contain the ${expected} extractor."
-              exit 1
-            fi
-          done
-
-          # If the bundle contained extractors beyond those the language needs, then it would not
-          # have been trimmed, and this job would be silently validating the combined bundle.
-          for other in actions cpp csharp go java javascript python ruby rust swift; do
-            if echo "$EXPECTED_EXTRACTORS" | grep -qw "$other"; then
-              continue
-            fi
-            if echo "$extractors" | grep -qx "$other"; then
-              echo "::error::The ${LANGUAGE} bundle also contains the ${other} extractor, so it is not trimmed."
-              exit 1
-            fi
-          done
-      - name: Check that the bundle was not added to the toolcache
-        env:
-          CODEQL_PATH: ${{ steps.init.outputs.codeql-path }}
-        run: |
-          # A bundle that is missing most of its extractors must never be left in the toolcache,
-          # where a later job analyzing a different language could pick it up. The runner image
-          # ships with its own CodeQL in the toolcache, so check where this bundle was extracted to
-          # rather than whether the toolcache contains CodeQL at all.
-          echo "CodeQL is at $CODEQL_PATH"
-          if [[ "$CODEQL_PATH" == "$RUNNER_TOOL_CACHE"/* ]]; then
-            echo "::error::The per-language bundle was added to the toolcache at $CODEQL_PATH."
-            exit 1
-          fi
-          if [[ "$CODEQL_PATH" != "$RUNNER_TEMP"/* ]]; then
-            echo "::error::Expected the per-language bundle to be extracted under $RUNNER_TEMP, but found it at $CODEQL_PATH."
-            exit 1
-          fi
-      - name: Build code
-        if: matrix['build-command']
-        run: ${{ matrix['build-command'] }}
-      - uses: ./../action/analyze
-        id: analysis
-        with:
-          upload-database: false
-      - name: Check that a database was created for the language
-        env:
-          DB_LOCATIONS: ${{ steps.analysis.outputs.db-locations }}
-          LANGUAGE: ${{ matrix.language }}
-        run: |
-          database="$(echo "$DB_LOCATIONS" | jq -r --arg lang "$LANGUAGE" '.[$lang] // empty')"
-          if [ -z "$database" ] || [ ! -d "$database" ]; then
-            echo "::error::No CodeQL database was created for ${LANGUAGE}."
-            echo "Databases: $DB_LOCATIONS"
-            exit 1
-          fi
-          echo "Created a ${LANGUAGE} database at ${database}."
-    env:
-      CODEQL_ACTION_PER_LANGUAGE_BUNDLES: true
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__remote-config.yml

@@ -1,96 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: PR Check - Remote config file
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs:
-      dotnet-version:
-        type: string
-        description: The version of .NET to install
-        required: false
-        default: 9.x
-      go-version:
-        type: string
-        description: The version of Go to install
-        required: false
-        default: '>=1.21.0'
-  workflow_call:
-    inputs:
-      dotnet-version:
-        type: string
-        description: The version of .NET to install
-        required: false
-        default: 9.x
-      go-version:
-        type: string
-        description: The version of Go to install
-        required: false
-        default: '>=1.21.0'
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: remote-config-${{github.ref}}-${{inputs.dotnet-version}}-${{inputs.go-version}}
-jobs:
-  remote-config:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: linked
-          - os: ubuntu-latest
-            version: nightly-latest
-    name: Remote config file
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Install .NET
-        uses: actions/setup-dotnet@a98b56852c35b8e3190ac28c8c2271da59106c68 # v6.0.0
-        with:
-          dotnet-version: ${{ inputs.dotnet-version || '9.x' }}
-      - name: Install Go
-        uses: actions/setup-go@b7ad1dad31e06c5925ef5d2fc7ad053ef454303e # v7.0.0
-        with:
-          go-version: ${{ inputs.go-version || '>=1.21.0' }}
-          cache: false
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - uses: ./../action/init
-        with:
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-          languages: cpp,csharp,java,javascript,python
-          config-file: ${{ github.repository }}/tests/multi-language-repo/.github/codeql/custom-queries.yml@${{ github.sha }}
-      - name: Build code
-        run: ./build.sh
-      - uses: ./../action/analyze
-    env:
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__resolve-environment-action.yml

@@ -1,85 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: PR Check - Resolve environment
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs: {}
-  workflow_call:
-    inputs: {}
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: resolve-environment-action-${{github.ref}}
-jobs:
-  resolve-environment-action:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: linked
-          - os: ubuntu-latest
-            version: default
-          - os: ubuntu-latest
-            version: nightly-latest
-    name: Resolve environment
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - uses: ./../action/init
-        with:
-          languages: go,javascript-typescript
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-
-      - name: Resolve environment for Go
-        uses: ./../action/resolve-environment
-        id: resolve-environment-go
-        with:
-          language: go
-
-      - name: Fail if Go configuration missing
-        if: (!fromJSON(steps.resolve-environment-go.outputs.environment).configuration.go)
-        run: exit 1
-
-      - name: Resolve environment for JavaScript/TypeScript
-        uses: ./../action/resolve-environment
-        id: resolve-environment-js
-        with:
-          language: javascript-typescript
-
-      - name: Fail if JavaScript/TypeScript configuration present
-        if: fromJSON(steps.resolve-environment-js.outputs.environment).configuration.javascript
-        run: exit 1
-    env:
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__rubocop-multi-language.yml

@@ -1,74 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: PR Check - RuboCop multi-language
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs: {}
-  workflow_call:
-    inputs: {}
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: rubocop-multi-language-${{github.ref}}
-jobs:
-  rubocop-multi-language:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: default
-    name: RuboCop multi-language
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Set up Ruby
-        uses: ruby/setup-ruby@14594264cd68ce8a2345dd349bc3d138a4ef85c8 # v1.327.0
-        with:
-          ruby-version: 2.6
-      - name: Install Code Scanning integration
-        run: bundle add code-scanning-rubocop --version 0.3.0 --skip-install
-      - name: Install dependencies
-        run: bundle install
-      - name: RuboCop run
-        run: |
-          bash -c "
-            bundle exec rubocop --require code_scanning --format CodeScanning::SarifFormatter -o rubocop.sarif
-            [[ $? -ne 2 ]]
-          "
-      - uses: ./../action/upload-sarif
-        with:
-          sarif_file: rubocop.sarif
-    env:
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__ruby.yml

@@ -1,82 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: PR Check - Ruby analysis
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs: {}
-  workflow_call:
-    inputs: {}
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: ruby-${{github.ref}}
-jobs:
-  ruby:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: linked
-          - os: macos-latest
-            version: linked
-          - os: ubuntu-latest
-            version: default
-          - os: macos-latest
-            version: default
-          - os: ubuntu-latest
-            version: nightly-latest
-          - os: macos-latest
-            version: nightly-latest
-    name: Ruby analysis
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - uses: ./../action/init
-        with:
-          languages: ruby
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - uses: ./../action/analyze
-        id: analysis
-        with:
-          upload-database: false
-      - name: Check database
-        run: |
-          RUBY_DB="${{ fromJson(steps.analysis.outputs.db-locations).ruby }}"
-          if [[ ! -d "$RUBY_DB" ]]; then
-            echo "Did not create a database for Ruby."
-            exit 1
-          fi
-    env:
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__rust.yml

@@ -1,80 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: PR Check - Rust analysis
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs: {}
-  workflow_call:
-    inputs: {}
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: rust-${{github.ref}}
-jobs:
-  rust:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: stable-v2.19.4
-          - os: ubuntu-latest
-            version: stable-v2.22.1
-          - os: ubuntu-latest
-            version: linked
-          - os: ubuntu-latest
-            version: default
-          - os: ubuntu-latest
-            version: nightly-latest
-    name: Rust analysis
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - uses: ./../action/init
-        with:
-          languages: rust
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - uses: ./../action/analyze
-        id: analysis
-        with:
-          upload-database: false
-      - name: Check database
-        run: |
-          RUST_DB="${{ fromJson(steps.analysis.outputs.db-locations).rust }}"
-          if [[ ! -d "$RUST_DB" ]]; then
-            echo "Did not create a database for Rust."
-            exit 1
-          fi
-    env:
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__split-workflow.yml

@@ -1,133 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: PR Check - Split workflow
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs:
-      dotnet-version:
-        type: string
-        description: The version of .NET to install
-        required: false
-        default: 9.x
-      go-version:
-        type: string
-        description: The version of Go to install
-        required: false
-        default: '>=1.21.0'
-  workflow_call:
-    inputs:
-      dotnet-version:
-        type: string
-        description: The version of .NET to install
-        required: false
-        default: 9.x
-      go-version:
-        type: string
-        description: The version of Go to install
-        required: false
-        default: '>=1.21.0'
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: split-workflow-${{github.ref}}-${{inputs.dotnet-version}}-${{inputs.go-version}}
-jobs:
-  split-workflow:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: linked
-          - os: macos-latest
-            version: linked
-          - os: ubuntu-latest
-            version: default
-          - os: macos-latest
-            version: default
-          - os: ubuntu-latest
-            version: nightly-latest
-          - os: macos-latest
-            version: nightly-latest
-    name: Split workflow
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Install .NET
-        uses: actions/setup-dotnet@a98b56852c35b8e3190ac28c8c2271da59106c68 # v6.0.0
-        with:
-          dotnet-version: ${{ inputs.dotnet-version || '9.x' }}
-      - name: Install Go
-        uses: actions/setup-go@b7ad1dad31e06c5925ef5d2fc7ad053ef454303e # v7.0.0
-        with:
-          go-version: ${{ inputs.go-version || '>=1.21.0' }}
-          cache: false
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - uses: ./../action/init
-        with:
-          config-file: '.github/codeql/codeql-config-packaging3.yml'
-          packs: +codeql-testing/codeql-pack1@1.0.0
-          languages: javascript
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - name: Build code
-        run: ./build.sh
-      - uses: ./../action/analyze
-        with:
-          skip-queries: true
-          output: '${{ runner.temp }}/results'
-          upload-database: false
-
-      - name: Assert No Results
-        run: |
-          if [ "$(ls -A $RUNNER_TEMP/results)" ]; then
-            echo "Expected results directory to be empty after skipping query execution!"
-            exit 1
-          fi
-      - uses: ./../action/analyze
-        with:
-          output: '${{ runner.temp }}/results'
-          upload-database: false
-      - name: Assert Results
-        run: |
-          cd "$RUNNER_TEMP/results"
-          # We should have 4 hits from these rules
-          EXPECTED_RULES="javascript/example/empty-or-one-block javascript/example/empty-or-one-block javascript/example/other-query-block javascript/example/two-block"
-
-          # use tr to replace newlines with spaces and xargs to trim leading and trailing whitespace
-          RULES="$(cat javascript.sarif | jq -r '.runs[0].results[].ruleId' | sort | tr "\n\r" " " | xargs)"
-          echo "Found matching rules '$RULES'"
-          if [ "$RULES" != "$EXPECTED_RULES" ]; then
-            echo "Did not match expected rules '$EXPECTED_RULES'."
-            exit 1
-          fi
-    env:
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__start-proxy.yml

@@ -1,105 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: PR Check - Start proxy
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs: {}
-  workflow_call:
-    inputs: {}
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: start-proxy-${{github.ref}}
-jobs:
-  start-proxy:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: linked
-          - os: macos-latest
-            version: linked
-          - os: windows-latest
-            version: linked
-    name: Start proxy
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Setup proxy for registries
-        id: proxy
-        uses: ./../action/start-proxy
-        with:
-          language: java
-          registry_secrets: |
-            [
-              {
-                "type": "maven_repository",
-                "url": "https://repo.maven.apache.org/maven2/"
-              },
-              {
-                "type": "maven_repository",
-                "url": "https://repo1.maven.org/maven2"
-              }
-            ]
-
-      - name: Print proxy outputs
-        run: |
-          echo "${{ steps.proxy.outputs.proxy_host }}"
-          echo "${{ steps.proxy.outputs.proxy_port }}"
-          echo "${{ steps.proxy.outputs.proxy_urls }}"
-
-      - name: Fail if proxy outputs are not set
-        if: (!steps.proxy.outputs.proxy_host) || (!steps.proxy.outputs.proxy_port) || (!steps.proxy.outputs.proxy_ca_certificate) || (!steps.proxy.outputs.proxy_urls)
-        run: exit 1
-
-      - name: Fail if proxy_urls does not contain all registries
-        if: |
-          join(fromJSON(steps.proxy.outputs.proxy_urls)[*].type, ',') != 'maven_repository,maven_repository'
-          || !contains(steps.proxy.outputs.proxy_urls, 'https://repo.maven.apache.org/maven2/')
-          || !contains(steps.proxy.outputs.proxy_urls, 'https://repo1.maven.org/maven2')
-        run: exit 1
-
-      - uses: ./../action/init
-        env:
-          CODEQL_PROXY_HOST: ${{ steps.proxy.outputs.proxy_host }}
-          CODEQL_PROXY_PORT: ${{ steps.proxy.outputs.proxy_port }}
-          CODEQL_PROXY_CA_CERTIFICATE: ${{ steps.proxy.outputs.proxy_ca_certificate }}
-        with:
-          languages: java
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-          config-file: codeql-action@main:tests/multi-language-repo/.github/codeql/custom-queries.yml
-    env:
-      CODEQL_ACTION_PROXY_API_REQUESTS: 'true'
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__submit-sarif-failure.yml

@@ -1,82 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: PR Check - Submit SARIF after failure
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs: {}
-  workflow_call:
-    inputs: {}
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: submit-sarif-failure-${{github.ref}}
-jobs:
-  submit-sarif-failure:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: linked
-          - os: ubuntu-latest
-            version: default
-          - os: ubuntu-latest
-            version: nightly-latest
-    name: Submit SARIF after failure
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      security-events: write
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - uses: ./init
-        with:
-          languages: javascript
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - name: Fail
-        # We want this job to pass if the Action correctly uploads the SARIF file for
-        # the failed run.
-        # Setting this step to continue on error means that it is marked as completing
-        # successfully, so will not fail the job.
-        continue-on-error: true
-        run: exit 1
-      - uses: ./analyze
-        # In a real workflow, this step wouldn't run. Since we used `continue-on-error`
-        # above, we manually disable it with an `if` condition.
-        if: false
-        with:
-          category: '/test-codeql-version:${{ matrix.version }}'
-    env:
-      CODEQL_ACTION_EXPECT_UPLOAD_FAILED_SARIF: true
-      CODEQL_ACTION_UPLOAD_FAILED_SARIF: true
-      CODEQL_ACTION_TEST_MODE: false
-      CODEQL_ACTION_TESTING_ENVIRONMENT: codeql-action-pr-checks

.github/workflows/__swift-autobuild.yml

@@ -1,78 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: PR Check - Swift analysis using autobuild
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs: {}
-  workflow_call:
-    inputs: {}
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: swift-autobuild-${{github.ref}}
-jobs:
-  swift-autobuild:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: macos-latest-xlarge
-            version: nightly-latest
-    name: Swift analysis using autobuild
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - uses: ./../action/init
-        id: init
-        with:
-          languages: swift
-          build-mode: autobuild
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - name: Check working directory
-        run: pwd
-      - uses: ./../action/autobuild
-        timeout-minutes: 30
-      - uses: ./../action/analyze
-        id: analysis
-        with:
-          upload-database: false
-      - name: Check database
-        run: |
-          SWIFT_DB="${{ fromJson(steps.analysis.outputs.db-locations).swift }}"
-          if [[ ! -d "$SWIFT_DB" ]]; then
-            echo "Did not create a database for Swift."
-            exit 1
-          fi
-    env:
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__swift-custom-build.yml

@@ -1,111 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: PR Check - Swift analysis using a custom build command
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs:
-      dotnet-version:
-        type: string
-        description: The version of .NET to install
-        required: false
-        default: 9.x
-      go-version:
-        type: string
-        description: The version of Go to install
-        required: false
-        default: '>=1.21.0'
-  workflow_call:
-    inputs:
-      dotnet-version:
-        type: string
-        description: The version of .NET to install
-        required: false
-        default: 9.x
-      go-version:
-        type: string
-        description: The version of Go to install
-        required: false
-        default: '>=1.21.0'
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: swift-custom-build-${{github.ref}}-${{inputs.dotnet-version}}-${{inputs.go-version}}
-jobs:
-  swift-custom-build:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: macos-latest-xlarge
-            version: linked
-          - os: macos-latest-xlarge
-            version: default
-          - os: macos-latest-xlarge
-            version: nightly-latest
-    name: Swift analysis using a custom build command
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Install .NET
-        uses: actions/setup-dotnet@a98b56852c35b8e3190ac28c8c2271da59106c68 # v6.0.0
-        with:
-          dotnet-version: ${{ inputs.dotnet-version || '9.x' }}
-      - name: Install Go
-        uses: actions/setup-go@b7ad1dad31e06c5925ef5d2fc7ad053ef454303e # v7.0.0
-        with:
-          go-version: ${{ inputs.go-version || '>=1.21.0' }}
-          cache: false
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - uses: ./../action/init
-        id: init
-        with:
-          languages: swift
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - name: Check working directory
-        run: pwd
-      - name: Build code
-        run: ./build.sh
-      - uses: ./../action/analyze
-        id: analysis
-        with:
-          upload-database: false
-      - name: Check database
-        run: |
-          SWIFT_DB="${{ fromJson(steps.analysis.outputs.db-locations).swift }}"
-          if [[ ! -d "$SWIFT_DB" ]]; then
-            echo "Did not create a database for Swift."
-            exit 1
-          fi
-    env:
-      DOTNET_GENERATE_ASPNET_CERTIFICATE: 'false'
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__unset-environment.yml

@@ -1,138 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: PR Check - Test unsetting environment variables
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs:
-      dotnet-version:
-        type: string
-        description: The version of .NET to install
-        required: false
-        default: 9.x
-      go-version:
-        type: string
-        description: The version of Go to install
-        required: false
-        default: '>=1.21.0'
-  workflow_call:
-    inputs:
-      dotnet-version:
-        type: string
-        description: The version of .NET to install
-        required: false
-        default: 9.x
-      go-version:
-        type: string
-        description: The version of Go to install
-        required: false
-        default: '>=1.21.0'
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: unset-environment-${{github.ref}}-${{inputs.dotnet-version}}-${{inputs.go-version}}
-jobs:
-  unset-environment:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: linked
-          - os: ubuntu-latest
-            version: nightly-latest
-    name: Test unsetting environment variables
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Install .NET
-        uses: actions/setup-dotnet@a98b56852c35b8e3190ac28c8c2271da59106c68 # v6.0.0
-        with:
-          dotnet-version: ${{ inputs.dotnet-version || '9.x' }}
-      - name: Install Go
-        uses: actions/setup-go@b7ad1dad31e06c5925ef5d2fc7ad053ef454303e # v7.0.0
-        with:
-          go-version: ${{ inputs.go-version || '>=1.21.0' }}
-          cache: false
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - uses: ./../action/init
-        id: init
-        with:
-          db-location: ${{ runner.temp }}/customDbLocation
-          # Swift is not supported on Ubuntu so we manually exclude it from the list here
-          languages: cpp,csharp,go,java,javascript,python,ruby
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-      - name: Build code
-        run: env -i PATH="$PATH" HOME="$HOME" ./build.sh
-      - uses: ./../action/analyze
-        id: analysis
-        with:
-          upload-database: false
-      - run: |
-          CPP_DB="${{ fromJson(steps.analysis.outputs.db-locations).cpp }}"
-          if [[ ! -d "$CPP_DB" ]] || [[ ! "$CPP_DB" == "${RUNNER_TEMP}/customDbLocation/cpp" ]]; then
-            echo "::error::Did not create a database for CPP, or created it in the wrong location." \
-              "Expected location was '${RUNNER_TEMP}/customDbLocation/cpp' but actual was '${CPP_DB}'"
-            exit 1
-          fi
-          CSHARP_DB="${{ fromJson(steps.analysis.outputs.db-locations).csharp }}"
-          if [[ ! -d "$CSHARP_DB" ]] || [[ ! "$CSHARP_DB" == "${RUNNER_TEMP}/customDbLocation/csharp" ]]; then
-            echo "::error::Did not create a database for C Sharp, or created it in the wrong location." \
-              "Expected location was '${RUNNER_TEMP}/customDbLocation/csharp' but actual was '${CSHARP_DB}'"
-            exit 1
-          fi
-          GO_DB="${{ fromJson(steps.analysis.outputs.db-locations).go }}"
-          if [[ ! -d "$GO_DB" ]] || [[ ! "$GO_DB" == "${RUNNER_TEMP}/customDbLocation/go" ]]; then
-            echo "::error::Did not create a database for Go, or created it in the wrong location." \
-              "Expected location was '${RUNNER_TEMP}/customDbLocation/go' but actual was '${GO_DB}'"
-            exit 1
-          fi
-          JAVA_DB="${{ fromJson(steps.analysis.outputs.db-locations).java }}"
-          if [[ ! -d "$JAVA_DB" ]] || [[ ! "$JAVA_DB" == "${RUNNER_TEMP}/customDbLocation/java" ]]; then
-            echo "::error::Did not create a database for Java, or created it in the wrong location." \
-              "Expected location was '${RUNNER_TEMP}/customDbLocation/java' but actual was '${JAVA_DB}'"
-            exit 1
-          fi
-          JAVASCRIPT_DB="${{ fromJson(steps.analysis.outputs.db-locations).javascript }}"
-          if [[ ! -d "$JAVASCRIPT_DB" ]] || [[ ! "$JAVASCRIPT_DB" == "${RUNNER_TEMP}/customDbLocation/javascript" ]]; then
-            echo "::error::Did not create a database for Javascript, or created it in the wrong location." \
-              "Expected location was '${RUNNER_TEMP}/customDbLocation/javascript' but actual was '${JAVASCRIPT_DB}'"
-            exit 1
-          fi
-          PYTHON_DB="${{ fromJson(steps.analysis.outputs.db-locations).python }}"
-          if [[ ! -d "$PYTHON_DB" ]] || [[ ! "$PYTHON_DB" == "${RUNNER_TEMP}/customDbLocation/python" ]]; then
-            echo "::error::Did not create a database for Python, or created it in the wrong location." \
-              "Expected location was '${RUNNER_TEMP}/customDbLocation/python' but actual was '${PYTHON_DB}'"
-            exit 1
-          fi
-    env:
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__upload-ref-sha-input.yml

@@ -1,103 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: "PR Check - Upload-sarif: 'ref' and 'sha' from inputs"
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs:
-      dotnet-version:
-        type: string
-        description: The version of .NET to install
-        required: false
-        default: 9.x
-      go-version:
-        type: string
-        description: The version of Go to install
-        required: false
-        default: '>=1.21.0'
-  workflow_call:
-    inputs:
-      dotnet-version:
-        type: string
-        description: The version of .NET to install
-        required: false
-        default: 9.x
-      go-version:
-        type: string
-        description: The version of Go to install
-        required: false
-        default: '>=1.21.0'
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: upload-ref-sha-input-${{github.ref}}-${{inputs.dotnet-version}}-${{inputs.go-version}}
-jobs:
-  upload-ref-sha-input:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: default
-    name: "Upload-sarif: 'ref' and 'sha' from inputs"
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Install .NET
-        uses: actions/setup-dotnet@a98b56852c35b8e3190ac28c8c2271da59106c68 # v6.0.0
-        with:
-          dotnet-version: ${{ inputs.dotnet-version || '9.x' }}
-      - name: Install Go
-        uses: actions/setup-go@b7ad1dad31e06c5925ef5d2fc7ad053ef454303e # v7.0.0
-        with:
-          go-version: ${{ inputs.go-version || '>=1.21.0' }}
-          cache: false
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - uses: ./../action/init
-        with:
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-          languages: cpp,csharp,java,javascript,python
-          config-file: ${{ github.repository }}/tests/multi-language-repo/.github/codeql/custom-queries.yml@${{ github.sha }}
-      - name: Build code
-        run: ./build.sh
-      # Generate some SARIF we can upload with the upload-sarif step
-      - uses: ./../action/analyze
-        with:
-          ref: 'refs/heads/main'
-          sha: '5e235361806c361d4d3f8859e3c897658025a9a2'
-          upload: never
-      - uses: ./../action/upload-sarif
-        with:
-          ref: 'refs/heads/main'
-          sha: '5e235361806c361d4d3f8859e3c897658025a9a2'
-    env:
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__upload-sarif.yml

@@ -1,168 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: PR Check - Test different uses of `upload-sarif`
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs:
-      dotnet-version:
-        type: string
-        description: The version of .NET to install
-        required: false
-        default: 9.x
-      go-version:
-        type: string
-        description: The version of Go to install
-        required: false
-        default: '>=1.21.0'
-  workflow_call:
-    inputs:
-      dotnet-version:
-        type: string
-        description: The version of .NET to install
-        required: false
-        default: 9.x
-      go-version:
-        type: string
-        description: The version of Go to install
-        required: false
-        default: '>=1.21.0'
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: upload-sarif-${{github.ref}}-${{inputs.dotnet-version}}-${{inputs.go-version}}
-jobs:
-  upload-sarif:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: default
-            analysis-kinds: code-scanning
-          - os: ubuntu-latest
-            version: default
-            analysis-kinds: code-quality
-          - os: ubuntu-latest
-            version: default
-            analysis-kinds: code-scanning,code-quality
-    name: Test different uses of `upload-sarif`
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Install .NET
-        uses: actions/setup-dotnet@a98b56852c35b8e3190ac28c8c2271da59106c68 # v6.0.0
-        with:
-          dotnet-version: ${{ inputs.dotnet-version || '9.x' }}
-      - name: Install Go
-        uses: actions/setup-go@b7ad1dad31e06c5925ef5d2fc7ad053ef454303e # v7.0.0
-        with:
-          go-version: ${{ inputs.go-version || '>=1.21.0' }}
-          cache: false
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - uses: ./../action/init
-        with:
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-          languages: csharp,java,javascript,python
-          analysis-kinds: ${{ matrix.analysis-kinds }}
-      - name: Build code
-        run: ./build.sh
-      # Generate some SARIF we can upload with the upload-sarif step
-      - uses: ./../action/analyze
-        with:
-          ref: 'refs/heads/main'
-          sha: '5e235361806c361d4d3f8859e3c897658025a9a2'
-          upload: never
-          output: ${{ runner.temp }}/results
-
-      - name: |
-          Upload all SARIF files for `analysis-kinds: ${{ matrix.analysis-kinds }}`
-        uses: ./../action/upload-sarif
-        id: upload-sarif
-        with:
-          ref: 'refs/heads/main'
-          sha: '5e235361806c361d4d3f8859e3c897658025a9a2'
-          sarif_file: ${{ runner.temp }}/results
-          category: |
-            ${{ github.workflow }}:upload-sarif/analysis-kinds:${{ matrix.analysis-kinds }}/os:${{ matrix.os }}/version:${{ matrix.version }}/test:all-files/
-      - name: 'Fail for missing output from `upload-sarif` step for `code-scanning`'
-        if: contains(matrix.analysis-kinds, 'code-scanning') && !(fromJSON(steps.upload-sarif.outputs.sarif-ids).code-scanning)
-        run: exit 1
-      - name: 'Fail for missing output from `upload-sarif` step for `code-quality`'
-        if: contains(matrix.analysis-kinds, 'code-quality') && !(fromJSON(steps.upload-sarif.outputs.sarif-ids).code-quality)
-        run: exit 1
-
-      - name: Upload single SARIF file for Code Scanning
-        uses: ./../action/upload-sarif
-        id: upload-single-sarif-code-scanning
-        if: contains(matrix.analysis-kinds, 'code-scanning')
-        with:
-          ref: 'refs/heads/main'
-          sha: '5e235361806c361d4d3f8859e3c897658025a9a2'
-          sarif_file: ${{ runner.temp }}/results/javascript.sarif
-          category: |
-            ${{ github.workflow }}:upload-sarif/analysis-kinds:${{ matrix.analysis-kinds }}/os:${{ matrix.os }}/version:${{ matrix.version }}/test:single-code-scanning/
-      - name: 'Fail for missing output from `upload-single-sarif-code-scanning` step'
-        if: contains(matrix.analysis-kinds, 'code-scanning') && !(fromJSON(steps.upload-single-sarif-code-scanning.outputs.sarif-ids).code-scanning)
-        run: exit 1
-      - name: Upload single SARIF file for Code Quality
-        uses: ./../action/upload-sarif
-        id: upload-single-sarif-code-quality
-        if: contains(matrix.analysis-kinds, 'code-quality')
-        with:
-          ref: 'refs/heads/main'
-          sha: '5e235361806c361d4d3f8859e3c897658025a9a2'
-          sarif_file: ${{ runner.temp }}/results/javascript.quality.sarif
-          category: |
-            ${{ github.workflow }}:upload-sarif/analysis-kinds:${{ matrix.analysis-kinds }}/os:${{ matrix.os }}/version:${{ matrix.version }}/test:single-code-quality/
-      - name: 'Fail for missing output from `upload-single-sarif-code-quality` step'
-        if: contains(matrix.analysis-kinds, 'code-quality') && !(fromJSON(steps.upload-single-sarif-code-quality.outputs.sarif-ids).code-quality)
-        run: exit 1
-
-      - name: Change SARIF file extension
-        if: contains(matrix.analysis-kinds, 'code-scanning')
-        run: mv ${{ runner.temp }}/results/javascript.sarif ${{ runner.temp }}/results/javascript.sarif.json
-      - name: Upload single non-`.sarif` file
-        uses: ./../action/upload-sarif
-        id: upload-single-non-sarif
-        if: contains(matrix.analysis-kinds, 'code-scanning')
-        with:
-          ref: 'refs/heads/main'
-          sha: '5e235361806c361d4d3f8859e3c897658025a9a2'
-          sarif_file: ${{ runner.temp }}/results/javascript.sarif.json
-          category: |
-            ${{ github.workflow }}:upload-sarif/analysis-kinds:${{ matrix.analysis-kinds }}/os:${{ matrix.os }}/version:${{ matrix.version }}/test:non-sarif/
-      - name: 'Fail for missing output from `upload-single-non-sarif` step'
-        if: contains(matrix.analysis-kinds, 'code-scanning') && !(fromJSON(steps.upload-single-non-sarif.outputs.sarif-ids).code-scanning)
-        run: exit 1
-    env:
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__with-checkout-path.yml

@@ -1,146 +0,0 @@
-# Warning: This file is generated automatically, and should not be modified.
-# Instead, please modify the template in the pr-checks directory and run:
-#     pr-checks/sync.sh
-# to regenerate this file.
-
-name: PR Check - Use a custom `checkout_path`
-env:
-  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-  GO111MODULE: auto
-on:
-  push:
-    branches:
-      - main
-      - releases/v*
-  pull_request: {}
-  merge_group:
-    types:
-      - checks_requested
-  schedule:
-    - cron: '0 5 * * *'
-  workflow_dispatch:
-    inputs:
-      dotnet-version:
-        type: string
-        description: The version of .NET to install
-        required: false
-        default: 9.x
-      go-version:
-        type: string
-        description: The version of Go to install
-        required: false
-        default: '>=1.21.0'
-  workflow_call:
-    inputs:
-      dotnet-version:
-        type: string
-        description: The version of .NET to install
-        required: false
-        default: 9.x
-      go-version:
-        type: string
-        description: The version of Go to install
-        required: false
-        default: '>=1.21.0'
-defaults:
-  run:
-    shell: bash
-concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
-  group: with-checkout-path-${{github.ref}}-${{inputs.dotnet-version}}-${{inputs.go-version}}
-jobs:
-  with-checkout-path:
-    strategy:
-      fail-fast: false
-      matrix:
-        include:
-          - os: ubuntu-latest
-            version: linked
-    name: Use a custom `checkout_path`
-    if: github.triggering_actor != 'dependabot[bot]'
-    permissions:
-      contents: read
-      security-events: read
-    timeout-minutes: 45
-    runs-on: ${{ matrix.os }}
-    steps:
-      # This ensures we don't accidentally use the original checkout for any part of the test.
-      - name: Check out repository
-        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      - name: Install .NET
-        uses: actions/setup-dotnet@a98b56852c35b8e3190ac28c8c2271da59106c68 # v6.0.0
-        with:
-          dotnet-version: ${{ inputs.dotnet-version || '9.x' }}
-      - name: Install Go
-        uses: actions/setup-go@b7ad1dad31e06c5925ef5d2fc7ad053ef454303e # v7.0.0
-        with:
-          go-version: ${{ inputs.go-version || '>=1.21.0' }}
-          cache: false
-      - name: Prepare test
-        id: prepare-test
-        uses: ./.github/actions/prepare-test
-        with:
-          version: ${{ matrix.version }}
-          use-all-platform-bundle: 'false'
-          setup-kotlin: 'true'
-      - name: Delete original checkout
-        run: |
-          # delete the original checkout so we don't accidentally use it.
-          # Actions does not support deleting the current working directory, so we
-          # delete the contents of the directory instead.
-          rm -rf ./* .github .git
-      # Check out the actions repo again, but at a different location.
-      # choose an arbitrary SHA so that we can later test that the commit_oid is not from main
-      - uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-        with:
-          ref: 474bbf07f9247ffe1856c6a0f94aeeb10e7afee6
-          path: x/y/z/some-path
-
-      - uses: ./../action/init
-        with:
-          tools: ${{ steps.prepare-test.outputs.tools-url }}
-          # it's enough to test one compiled language and one interpreted language
-          languages: csharp,javascript
-          source-root: x/y/z/some-path/tests/multi-language-repo
-
-      - name: Build code
-        working-directory: x/y/z/some-path/tests/multi-language-repo
-        run: |
-          ./build.sh
-
-      - uses: ./../action/analyze
-        with:
-          checkout_path: x/y/z/some-path/tests/multi-language-repo
-          ref: v1.1.0
-          sha: 474bbf07f9247ffe1856c6a0f94aeeb10e7afee6
-
-      - name: Verify SARIF after upload
-        run: |
-          PAYLOAD_FILE="$RUNNER_TEMP/payload-code-scanning.json"
-          EXPECTED_COMMIT_OID="474bbf07f9247ffe1856c6a0f94aeeb10e7afee6"
-          EXPECTED_REF="v1.1.0"
-          EXPECTED_CHECKOUT_URI_SUFFIX="/x/y/z/some-path/tests/multi-language-repo"
-
-          ACTUAL_COMMIT_OID="$(cat "$PAYLOAD_FILE" | jq -r .commit_oid)"
-          ACTUAL_REF="$(cat "$PAYLOAD_FILE" | jq -r .ref)"
-          ACTUAL_CHECKOUT_URI="$(cat "$PAYLOAD_FILE" | jq -r .checkout_uri)"
-
-          if [[ "$EXPECTED_COMMIT_OID" != "$ACTUAL_COMMIT_OID" ]]; then
-            echo "::error Invalid commit oid. Expected: $EXPECTED_COMMIT_OID Actual: $ACTUAL_COMMIT_OID"
-            echo "$PAYLOAD_FILE"
-            exit 1
-          fi
-
-          if [[ "$EXPECTED_REF" != "$ACTUAL_REF" ]]; then
-            echo "::error Invalid ref. Expected: '$EXPECTED_REF' Actual: '$ACTUAL_REF'"
-            echo "$PAYLOAD_FILE"
-            exit 1
-          fi
-
-          if [[ "$ACTUAL_CHECKOUT_URI" != *$EXPECTED_CHECKOUT_URI_SUFFIX ]]; then
-            echo "::error Invalid checkout URI suffix. Expected suffix: $EXPECTED_CHECKOUT_URI_SUFFIX Actual uri: $ACTUAL_CHECKOUT_URI"
-            echo "$PAYLOAD_FILE"
-            exit 1
-          fi
-    env:
-      CODEQL_ACTION_TEST_MODE: true

.github/workflows/pr-checks.yml

@@ -1,14 +1,11 @@
 name: PR Checks
 
 on:
-  push:
-  pull_request:
-  merge_group:
-    types: [checks_requested]
   workflow_dispatch:
+  workflow_call:
 
 concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || github.event_name == 'workflow_call' }}
   group: ${{ github.workflow }}-${{ github.ref }}
 
 defaults:

pr-checks/checks/multi-language-autodetect.yml

@@ -20,14 +20,13 @@ env:
 installGo: true
 installDotNet: true
 steps:
-  - name: Install Python 3.13.15 for older CLI versions
-    # Older CLI versions don't work with Python 3.13.16 or newer because their Python extractor
-    # imports `importlib._bootstrap._ERR_MSG`, which those Python versions no longer define.
+  - name: Install Python 3.13 for older CLI versions
+    # We need Python 3.13 for older CLI versions because they are not compatible with Python 3.14 or newer.
     # See https://github.com/github/codeql-action/pull/3212
     if: matrix.version != 'nightly-latest' && matrix.version != 'linked'
     uses: actions/setup-python@5fda3b95a4ea91299a34e894583c3862153e4b97 # v7.0.0
     with:
-      python-version: "3.13.15"
+      python-version: "3.13"
 
   - name: Use Xcode 16
     # Only the older CodeQL CLI versions need Xcode 16, and these run on macOS 15.

pr-checks/sync.ts

@@ -571,6 +571,7 @@ function generateJob(
   specSteps.items.unshift(...steps);
 
   const checkJob: Record<string, any> = {
+    needs: ["pr-checks"],
     strategy: {
       "fail-fast": false,
       matrix: checkSpecification.matrix ?? {
@@ -698,6 +699,35 @@ function generateValidationJobs(
   };
 }
 
+/**
+ * Constructs the body of a job that calls another workflow.
+ *
+ * @param jobName The friendly name of the job.
+ * @param workflowBaseName The base name of the workflow file to call.
+ * @param options Optional settings and overrides for the workflow call.
+ * @param options.inputs Optionally, the inputs for the workflow.
+ * @param options.permissions Permission overrides for the call.
+ */
+function workflowCall(
+  jobName: string,
+  workflowBaseName: string,
+  options?: {
+    inputs?: Record<string, string>;
+    permissions?: Record<string, "read" | "write">;
+  },
+) {
+  return {
+    name: jobName,
+    permissions: {
+      contents: "read",
+      "security-events": "read",
+      ...options?.permissions,
+    },
+    uses: `./.github/workflows/${workflowBaseName}.yml`,
+    with: options?.inputs,
+  };
+}
+
 /**
  * Main entry point for the sync script.
  */
@@ -714,6 +744,47 @@ function main(): void {
 
   console.log(`Found ${checkFiles.length} check specification(s).`);
 
+  let allInputs: Record<string, WorkflowInput> = {};
+
+  const initialChecksJob = workflowCall("Initial checks", "pr-checks", {
+    permissions: { "security-events": "write", "pull-requests": "write" },
+  });
+
+  const cron = new yaml.Scalar("0 5 * * *");
+  cron.type = yaml.Scalar.QUOTE_SINGLE;
+
+  const checkWorkflow = {
+    name: `PR Checks`,
+    env: {
+      GITHUB_TOKEN: "${{ secrets.GITHUB_TOKEN }}",
+      GO111MODULE: "auto",
+    },
+    on: {
+      push: {
+        branches: ["main", "releases/v*"],
+      },
+      pull_request: {},
+      merge_group: {
+        types: ["checks_requested"],
+      },
+      schedule: [{ cron }],
+      workflow_dispatch: {
+        inputs: {},
+      },
+      workflow_call: {
+        inputs: {},
+      },
+    },
+    defaults: {
+      run: {
+        shell: "bash",
+      },
+    },
+    jobs: {
+      "pr-checks": initialChecksJob,
+    },
+  };
+
   const collections: Record<
     string,
     Array<{
@@ -753,56 +824,31 @@ function main(): void {
       });
     }
 
-    let extraGroupName = "";
-    for (const inputName of Object.keys(combinedInputs)) {
-      extraGroupName += `-\${{inputs.${inputName}}}`;
+    allInputs = { ...allInputs, ...combinedInputs };
+
+    checkWorkflow.jobs[checkName] = checkJob;
+
+    for (const [name, job] of Object.entries(validationJobs)) {
+      checkWorkflow.jobs[name] = job;
     }
-
-    const cron = new yaml.Scalar("0 5 * * *");
-    cron.type = yaml.Scalar.QUOTE_SINGLE;
-
-    const workflow = {
-      name: `PR Check - ${checkSpecification.name}`,
-      env: {
-        GITHUB_TOKEN: "${{ secrets.GITHUB_TOKEN }}",
-        GO111MODULE: "auto",
-      },
-      on: {
-        push: {
-          branches: ["main", "releases/v*"],
-        },
-        pull_request: {},
-        merge_group: {
-          types: ["checks_requested"],
-        },
-        schedule: [{ cron }],
-        workflow_dispatch: {
-          inputs: combinedInputs,
-        },
-        workflow_call: {
-          inputs: combinedInputs,
-        },
-      },
-      defaults: {
-        run: {
-          shell: "bash",
-        },
-      },
-      concurrency: {
-        "cancel-in-progress":
-          "${{ github.event_name == 'pull_request' || false }}",
-        group: `${checkName}-\${{github.ref}}${extraGroupName}`,
-      },
-      jobs: {
-        [checkName]: checkJob,
-        ...validationJobs,
-      },
-    };
-
-    const outputPath = path.join(OUTPUT_DIR, `__${checkName}.yml`);
-    writeYaml(outputPath, workflow);
   }
 
+  let extraGroupName = "";
+  for (const inputName of Object.keys(allInputs)) {
+    extraGroupName += `-\${{inputs.${inputName}}}`;
+  }
+
+  checkWorkflow["concurrency"] = {
+    "cancel-in-progress": "${{ github.event_name == 'pull_request' || false }}",
+    group: `pr-\${{github.ref}}${extraGroupName}`,
+  };
+
+  checkWorkflow.on.workflow_call.inputs = allInputs;
+  checkWorkflow.on.workflow_dispatch.inputs = allInputs;
+
+  const mainOutputPath = path.join(OUTPUT_DIR, `__pr.yml`);
+  writeYaml(mainOutputPath, checkWorkflow);
+
   // Write workflow files for collections.
   for (const collectionName of Object.keys(collections)) {
     const jobs: Record<string, any> = {};
@@ -818,15 +864,9 @@ function main(): void {
         checkWith[inputName] = `\${{ inputs.${inputName} }}`;
       }
 
-      jobs[checkName] = {
-        name: specification.name,
-        permissions: {
-          contents: "read",
-          "security-events": "read",
-        },
-        uses: `./.github/workflows/__${checkName}.yml`,
-        with: checkWith,
-      };
+      jobs[checkName] = workflowCall(specification.name, `__${checkName}`, {
+        inputs: checkWith,
+      });
     }
 
     const collectionWorkflow = {
@@ -848,8 +888,10 @@ function main(): void {
   }
 
   console.log(
-    `\nDone. Wrote ${checkFiles.length} workflow file(s) to ${OUTPUT_DIR}`,
+    `\nDone. Generated ${checkFiles.length} check(s) to ${OUTPUT_DIR}`,
   );
 }
 
-main();
+if (import.meta.main) {
+  main();
+}