Merge pull request #4304 from github/backport-v3.39.3-33d7b85da

Merge releases/v4 into releases/v3

.editorconfig

@@ -8,3 +8,6 @@ trim_trailing_whitespace = true
 [*.ts]
 indent_style = space
 indent_size = 2
+
+[*.{yml,yaml}]
+indent_size = 2

.github/ISSUE_TEMPLATE/config.yml

@@ -2,4 +2,4 @@ blank_issues_enabled: true
 contact_links:
   - name: Contact GitHub Support
     url: https://support.github.com/request
-    about: Contact Support 
+    about: Contact Support

.github/actions/check-codescanning-config/action.yml

@@ -1,7 +1,7 @@
 name: Check Code-Scanning Config
 description: |
-    Checks the code scanning configuration file generated by the
-    action to ensure it contains the expected contents
+  Checks the code scanning configuration file generated by the
+  action to ensure it contains the expected contents
 inputs:
   languages:
     required: false
@@ -52,7 +52,7 @@ runs:
         tools: ${{ inputs.tools }}
         db-location: ${{ runner.temp }}/codescanning-config-cli-test
       env:
-        CODEQL_ACTION_TEST_MODE: 'true'
+        CODEQL_ACTION_TEST_MODE: "true"
 
     - name: Install dependencies
       shell: bash
@@ -62,7 +62,7 @@ runs:
       working-directory: ${{ github.action_path }}
       shell: bash
       env:
-        EXPECTED_CONFIG_FILE_CONTENTS: '${{ inputs.expected-config-file-contents }}'
+        EXPECTED_CONFIG_FILE_CONTENTS: "${{ inputs.expected-config-file-contents }}"
       run: ts-node ./index.ts "$RUNNER_TEMP/user-config.yaml" "$EXPECTED_CONFIG_FILE_CONTENTS"
     - name: Clean up
       shell: bash

.github/actions/check-sarif/action.yml

@@ -16,5 +16,5 @@ inputs:
       Comma separated list of query ids that should NOT be included in this SARIF file.
 
 runs:
-  using: node24
+  using: node20
   main: index.js

.github/actions/prepare-test/action.yml

@@ -6,11 +6,11 @@ inputs:
     required: true
   use-all-platform-bundle:
     description: "If true, we output a tools URL with codeql-bundle.tar.gz file rather than platform-specific URL"
-    default: 'false'
+    default: "false"
     required: false
   setup-kotlin:
     description: "If true, we setup kotlin"
-    default: 'true'
+    default: "true"
     required: true
 outputs:
   tools-url:
@@ -73,7 +73,10 @@ runs:
           exit 1
         fi
 
-    - uses: fwilhe2/setup-kotlin@9c245a6425255f5e98ba1ce6c15d31fce7eca9da
+    - uses: fwilhe2/setup-kotlin@b325539ca8f6e1d9ee04efed06f49bdbf5426dbb # v2.1
       if: ${{ inputs.setup-kotlin == 'true' }}
       with:
-        version: 1.8.21
+        # Kotlin is installed on the runners by default, but the version that is pre-installed is too new
+        # to be supported by CodeQL. This Kotlin version is selected to be compatible with both the default Java
+        # version on the `ubuntu-latest` runners and CodeQL.
+        version: 2.1.20

.github/actions/query-filter-test/action.yml

@@ -54,7 +54,7 @@ runs:
     - name: Check SARIF
       uses: ./../action/.github/actions/check-sarif
       with:
-        sarif-file:  ${{ inputs.sarif-file }}
+        sarif-file: ${{ inputs.sarif-file }}
         queries-run: ${{ inputs.queries-run}}
         queries-not-run: ${{ inputs.queries-not-run}}
     - name: Cleanup after test

.github/actions/release-branches/action.yml

@@ -1,11 +1,11 @@
-name: 'Release branches'
-description: 'Determine branches for release & backport'
+name: "Release branches"
+description: "Determine branches for release & backport"
 inputs:
   major_version:
-    description: 'The version as extracted from the package.json file'
+    description: "The version as extracted from the package.json file"
     required: true
   latest_tag:
-    description: 'The most recent tag published to the repository'
+    description: "The most recent tag published to the repository"
     required: true
 outputs:
   backport_source_branch:

.github/actions/release-initialise/action.yml

@@ -1,25 +1,24 @@
-name: 'Prepare release job'
-description: 'Prepare for updating a release branch'
+name: "Prepare release job"
+description: "Prepare for updating a release branch"
 
 runs:
   using: "composite"
   steps:
-
     - name: Dump environment
       run: env
       shell: bash
 
     - name: Dump GitHub context
       env:
-        GITHUB_CONTEXT: '${{ toJson(github) }}'
+        GITHUB_CONTEXT: "${{ toJson(github) }}"
       run: echo "$GITHUB_CONTEXT"
       shell: bash
 
     - name: Set up Node
-      uses: actions/setup-node@48b55a011bda9f5d6aeb4c2d9c7362e8dae4041e # v6.4.0
+      uses: actions/setup-node@949feb2413d6458794dcd2491c4babbbce0c15c1 # v7.1.0
       with:
         node-version: 24
-        cache: 'npm'
+        cache: "npm"
 
     - name: Install JavaScript dependencies
       shell: bash

.github/actions/verify-debug-artifact-scan-completed/action.yml

@@ -1,6 +1,6 @@
 name: Verify that the best-effort debug artifact scan completed
 description: Verifies that the best-effort debug artifact scan completed successfully during tests
 runs:
-  using: node24
+  using: node20
   main: index.js
   post: post.js

.github/copilot-instructions.md

@@ -11,9 +11,12 @@ The CodeQL Action is used in GitHub Actions workflows to run CodeQL scans using
 
 ## Review instructions
 
-- When wording review comments, be helpful and friendly. Assume that the PR author has written the code with the best of intentions. Word your comments constructively as suggestions for improvements. Do not word suggestions as commands.
+- Prioritise identifying critical issues, such as logic bugs, over comments on documentation or typos.
+- When wording review comments, be helpful and friendly. Assume that the PR author has written the code with the best of intentions. Never word suggestions as commands or using the imperative. Examples of what you should never write: "Preserve that non-fatal behaviour here" or "Please preserve that non-fatal behaviour here".
+- When writing feedback, assume that the PR author is competent and is able to understand whether the point you are making is valid or not, why you are raising it, and how to best address it. While you can suggest how to address a point you are making, don't phrase it as a requirement or assume that it is the only solution.
+- Always word your comments constructively as suggestions for improvements, for example: "It would make sense to ..." or "Could you add ...?" or "Would it make sense to ...?"
 - If you want to comment on a change that you believe will fail a CI check, do not present the CI failure you expect as a fact. Instead, write that you think a change "may" lead to a failure in CI. Suggest that, if such a failure manifests, the changes you are commenting on may be the place responsible for the failure and are worth looking at.
-- If a suggestion you make is suitable for a follow-up, such as a refactoring that doesn't change the behaviour or fixing a typo in a comment, mention that it can be addressed in a later PR rather than blocking this one.
+- If a suggestion you make is suitable for a follow-up, such as a refactoring that doesn't change the behaviour or fixing a typo in a comment, mention that it can be addressed in a later PR rather than blocking this one or prefix your comment with "Minor: ".
 - If a change is a net improvement, for example because it improves on an existing limitation of existing code, do not complain about pre-existing problems that remain. You may comment on them, but you should make it clear that the thing you are commenting on is not new by writing e.g. "Not new in this PR, but [..]" followed by your description of the issue and a suggestion that it could be improved at the same time with e.g. "Consider whether this is worth addressing as part of this PR as well."
 
 ## Generated code
@@ -22,6 +25,16 @@ The main codebase of the CodeQL Action is written in TypeScript and compiled to
 
 GitHub Actions workflows in the `.github/workflows` directory whose filenames start with two underscores (e.g. `__all-platform-bundle.yml`) are automatically generated using the `pr-checks/sync.sh` script from template files in the `pr-checks/checks` directory. Therefore, you do not need to review files in the `.github/workflows` directory that start with two underscores. However, you should review changes to the `pr-checks` directory as well as workflows in the `.github/workflows` directory that do not start with underscores.
 
+## Feature flags
+
+Some functionality in the code may be gated behind feature flags, which are controlled server-side. If the functionality that is gated behind them is user-facing, then this should be documented in a change note at the time that the gated functionality is added. See `CHANGELOG.md` for existing notes that mention "experimental" for examples. These typically include information about when users may expect to see the feature rolled out.
+
+When a feature flag that gates some functionality is removed, this does not need to be documented in a change note since the feature is already rolled out and the notes for the release which introduced the feature already describe it. The only exception is functionality which will start having an effect on GHES as a result of the feature flag removal:
+
+- Most functionality gated behind feature flags does not affect GHES.
+- We can make functionality available on GHES by setting `defaultValue` to `true` first and waiting for this to have had an effect on GHES. No change note is needed if a feature flag is removed where `defaultValue` was `true`.
+- When removing a feature flag where `defaultValue` was `false` and the functionality starts to affect GHES, a change note may be appropriate.
+
 ## Release process
 
 Changes that are merged to the `main` branch are not used in production straight away. Instead, changes from `main` must first be released using the release process, which has to be manually triggered by a staff member. Therefore, it is possible for further changes to be made to the code after some changes have been merged to `main` but before they are released. Once the release process automation is started, a series of PRs are automatically generated:

.github/dependabot.yml

@@ -16,6 +16,14 @@ updates:
       # This might be fixed when we move to eslint v9.
       - dependency-name: "eslint-plugin-import"
         versions: [">=2.30.0"]
+
+      # Some of our dependencies are lagging behind with support for new versions of
+      # `undici` which is why we have to override it in `package.json`. Dependabot
+      # workflows fail when they try to update a dependency that is explicitly
+      # overriden. Since this happens somewhat routinely at the moment, we are
+      # excluding `undici` here and have to manually update it when needed.
+      - dependency-name: "undici"
+        versions: [">=7.30.1"]
     groups:
       npm-minor:
         patterns:
@@ -26,7 +34,7 @@ updates:
   - package-ecosystem: github-actions
     directories:
       - "/.github/workflows"
-      - "/.github/actions"
+      - "/.github/actions/*/"
     schedule:
       interval: weekly
     cooldown:

.github/workflows/__all-platform-bundle.yml

@@ -0,0 +1,99 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: PR Check - All-platform bundle
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs:
+      dotnet-version:
+        type: string
+        description: The version of .NET to install
+        required: false
+        default: 9.x
+      go-version:
+        type: string
+        description: The version of Go to install
+        required: false
+        default: ">=1.21.0"
+  workflow_call:
+    inputs:
+      dotnet-version:
+        type: string
+        description: The version of .NET to install
+        required: false
+        default: 9.x
+      go-version:
+        type: string
+        description: The version of Go to install
+        required: false
+        default: ">=1.21.0"
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: all-platform-bundle-${{github.ref}}-${{inputs.dotnet-version}}-${{inputs.go-version}}
+jobs:
+  all-platform-bundle:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-26.04
+            version: nightly-latest
+          - os: macos-26-xlarge
+            version: nightly-latest
+          - os: windows-2025
+            version: nightly-latest
+    name: All-platform bundle
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Install .NET
+        uses: actions/setup-dotnet@a98b56852c35b8e3190ac28c8c2271da59106c68 # v6.0.0
+        with:
+          dotnet-version: ${{ inputs.dotnet-version || '9.x' }}
+      - name: Install Go
+        uses: actions/setup-go@b7ad1dad31e06c5925ef5d2fc7ad053ef454303e # v7.0.0
+        with:
+          go-version: ${{ inputs.go-version || '>=1.21.0' }}
+          cache: false
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "true"
+          setup-kotlin: "true"
+      - id: init
+        uses: ./../action/init
+        with:
+          # Swift is not supported on Ubuntu so we manually exclude it from the list here
+          languages: cpp,csharp,go,java,javascript,python,ruby
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - name: Build code
+        run: ./build.sh
+      - uses: ./../action/analyze
+    env:
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__analysis-kinds.yml

@@ -0,0 +1,147 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: PR Check - Analysis kinds
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs: {}
+  workflow_call:
+    inputs: {}
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: analysis-kinds-${{github.ref}}
+jobs:
+  analysis-kinds:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-26.04
+            version: linked
+            analysis-kinds: code-scanning
+          - os: ubuntu-26.04
+            version: linked
+            analysis-kinds: code-quality
+          - os: ubuntu-26.04
+            version: linked
+            analysis-kinds: code-scanning,code-quality
+          - os: ubuntu-26.04
+            version: linked
+            analysis-kinds: risk-assessment
+          - os: ubuntu-26.04
+            version: nightly-latest
+            analysis-kinds: code-scanning
+          - os: ubuntu-26.04
+            version: nightly-latest
+            analysis-kinds: code-quality
+          - os: ubuntu-26.04
+            version: nightly-latest
+            analysis-kinds: code-scanning,code-quality
+          - os: ubuntu-26.04
+            version: nightly-latest
+            analysis-kinds: risk-assessment
+    name: Analysis kinds
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "true"
+      - uses: ./../action/init
+        with:
+          languages: javascript
+          analysis-kinds: ${{ matrix.analysis-kinds }}
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - uses: ./../action/analyze
+        with:
+          output: "${{ runner.temp }}/results"
+          upload-database: false
+          post-processed-sarif-path: "${{ runner.temp }}/post-processed"
+
+      - name: Upload SARIF files
+        uses: actions/upload-artifact@cf430e030ddbb5b0abf93d22962f4752f3646cd9 # v7.0.2
+        with:
+          name: |
+            analysis-kinds-${{ matrix.os }}-${{ matrix.version }}-${{ matrix.analysis-kinds }}
+          path: "${{ runner.temp }}/results/*.sarif"
+          retention-days: 7
+
+      - name: Upload post-processed SARIF
+        uses: actions/upload-artifact@cf430e030ddbb5b0abf93d22962f4752f3646cd9 # v7.0.2
+        with:
+          name: |
+            post-processed-${{ matrix.os }}-${{ matrix.version }}-${{ matrix.analysis-kinds }}
+          path: "${{ runner.temp }}/post-processed"
+          retention-days: 7
+          if-no-files-found: error
+
+      - name: Check quality query does not appear in security SARIF
+        if: contains(matrix.analysis-kinds, 'code-scanning')
+        uses: actions/github-script@ed597411d8f924073f98dfc5c65a23a2325f34cd # v8.0.0
+        env:
+          SARIF_PATH: "${{ runner.temp }}/results/javascript.sarif"
+          EXPECT_PRESENT: "false"
+        with:
+          script: ${{ env.CHECK_SCRIPT }}
+      - name: Check quality query appears in quality SARIF
+        if: contains(matrix.analysis-kinds, 'code-quality')
+        uses: actions/github-script@ed597411d8f924073f98dfc5c65a23a2325f34cd # v8.0.0
+        env:
+          SARIF_PATH: "${{ runner.temp }}/results/javascript.quality.sarif"
+          EXPECT_PRESENT: "true"
+        with:
+          script: ${{ env.CHECK_SCRIPT }}
+    env:
+      CODEQL_ACTION_RISK_ASSESSMENT_ID: 1
+      CHECK_SCRIPT: |
+        const fs = require('fs');
+
+        const sarif = JSON.parse(fs.readFileSync(process.env['SARIF_PATH'], 'utf8'));
+        const expectPresent = JSON.parse(process.env['EXPECT_PRESENT']);
+        const run = sarif.runs[0];
+        const extensions = run.tool.extensions;
+
+        if (extensions === undefined) {
+          core.setFailed('`extensions` property not found in the SARIF run property bag.');
+        }
+
+        // ID of a query we want to check the presence for
+        const targetId = 'js/regex/always-matches';
+        const found = extensions.find(extension => extension.rules && extension.rules.find(rule => rule.id === targetId));
+
+        if (found && expectPresent) {
+          console.log(`Found rule with id '${targetId}'.`);
+        } else if (!found && !expectPresent) {
+          console.log(`Rule with id '${targetId}' was not found.`);
+        } else {
+          core.setFailed(`${ found ? "Found" : "Didn't find" } rule ${targetId}`);
+        }
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__analyze-ref-input.yml

@@ -0,0 +1,97 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: "PR Check - Analyze: 'ref' and 'sha' from inputs"
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs:
+      dotnet-version:
+        type: string
+        description: The version of .NET to install
+        required: false
+        default: 9.x
+      go-version:
+        type: string
+        description: The version of Go to install
+        required: false
+        default: ">=1.21.0"
+  workflow_call:
+    inputs:
+      dotnet-version:
+        type: string
+        description: The version of .NET to install
+        required: false
+        default: 9.x
+      go-version:
+        type: string
+        description: The version of Go to install
+        required: false
+        default: ">=1.21.0"
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: analyze-ref-input-${{github.ref}}-${{inputs.dotnet-version}}-${{inputs.go-version}}
+jobs:
+  analyze-ref-input:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-26.04
+            version: default
+    name: "Analyze: 'ref' and 'sha' from inputs"
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Install .NET
+        uses: actions/setup-dotnet@a98b56852c35b8e3190ac28c8c2271da59106c68 # v6.0.0
+        with:
+          dotnet-version: ${{ inputs.dotnet-version || '9.x' }}
+      - name: Install Go
+        uses: actions/setup-go@b7ad1dad31e06c5925ef5d2fc7ad053ef454303e # v7.0.0
+        with:
+          go-version: ${{ inputs.go-version || '>=1.21.0' }}
+          cache: false
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "true"
+      - uses: ./../action/init
+        with:
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+          languages: cpp,csharp,java,javascript,python
+          config-file: ${{ github.repository }}/tests/multi-language-repo/.github/codeql/custom-queries.yml@${{ github.sha }}
+      - name: Build code
+        run: ./build.sh
+      - uses: ./../action/analyze
+        with:
+          ref: "refs/heads/main"
+          sha: "5e235361806c361d4d3f8859e3c897658025a9a2"
+    env:
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__autobuild-action.yml

@@ -0,0 +1,96 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: PR Check - autobuild-action
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs:
+      dotnet-version:
+        type: string
+        description: The version of .NET to install
+        required: false
+        default: 9.x
+  workflow_call:
+    inputs:
+      dotnet-version:
+        type: string
+        description: The version of .NET to install
+        required: false
+        default: 9.x
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: autobuild-action-${{github.ref}}-${{inputs.dotnet-version}}
+jobs:
+  autobuild-action:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-26.04
+            version: linked
+          - os: macos-26
+            version: linked
+          - os: windows-2025
+            version: linked
+    name: autobuild-action
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Install .NET
+        uses: actions/setup-dotnet@a98b56852c35b8e3190ac28c8c2271da59106c68 # v6.0.0
+        with:
+          dotnet-version: ${{ inputs.dotnet-version || '9.x' }}
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "true"
+      - uses: ./../action/init
+        with:
+          languages: csharp
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - uses: ./../action/autobuild
+        env:
+          # Explicitly disable the CLR tracer.
+          COR_ENABLE_PROFILING: ""
+          COR_PROFILER: ""
+          COR_PROFILER_PATH_64: ""
+          CORECLR_ENABLE_PROFILING: ""
+          CORECLR_PROFILER: ""
+          CORECLR_PROFILER_PATH_64: ""
+      - uses: ./../action/analyze
+      - name: Check database
+        run: |
+          cd "$RUNNER_TEMP/codeql_databases"
+          if [[ ! -d csharp ]]; then
+            echo "Did not find a C# database"
+            exit 1
+          fi
+    env:
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__autobuild-direct-tracing-with-working-dir.yml

@@ -0,0 +1,101 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: PR Check - Autobuild direct tracing (custom working directory)
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs:
+      java-version:
+        type: string
+        description: The version of Java to install
+        required: false
+        default: "17"
+  workflow_call:
+    inputs:
+      java-version:
+        type: string
+        description: The version of Java to install
+        required: false
+        default: "17"
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: autobuild-direct-tracing-with-working-dir-${{github.ref}}-${{inputs.java-version}}
+jobs:
+  autobuild-direct-tracing-with-working-dir:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-26.04
+            version: linked
+          - os: windows-2025
+            version: linked
+          - os: ubuntu-26.04
+            version: nightly-latest
+          - os: windows-2025
+            version: nightly-latest
+    name: Autobuild direct tracing (custom working directory)
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Install Java
+        uses: actions/setup-java@b843ebf9b913146b38da2eaa7aeddf76074ae1ad # v6.1.0
+        with:
+          java-version: ${{ inputs.java-version || '17' }}
+          distribution: temurin
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "true"
+      - name: Test setup
+        run: |
+          # Make sure that Gradle build succeeds in autobuild-dir ...
+          cp -a ../action/tests/java-repo autobuild-dir
+          # ... and fails if attempted in the current directory
+          echo > build.gradle
+      - uses: ./../action/init
+        with:
+          build-mode: autobuild
+          languages: java
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - name: Check that indirect tracing is disabled
+        run: |
+          if [[ ! -z "${CODEQL_RUNNER}" ]]; then
+            echo "Expected indirect tracing to be disabled, but the" \
+              "CODEQL_RUNNER environment variable is set."
+            exit 1
+          fi
+      - uses: ./../action/autobuild
+        with:
+          working-directory: autobuild-dir
+      - uses: ./../action/analyze
+    env:
+      CODEQL_ACTION_AUTOBUILD_BUILD_MODE_DIRECT_TRACING: true
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__autobuild-working-dir.yml

@@ -0,0 +1,78 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: PR Check - Autobuild working directory
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs: {}
+  workflow_call:
+    inputs: {}
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: autobuild-working-dir-${{github.ref}}
+jobs:
+  autobuild-working-dir:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-26.04
+            version: linked
+    name: Autobuild working directory
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "true"
+      - name: Test setup
+        run: |
+          # Make sure that Gradle build succeeds in autobuild-dir ...
+          cp -a ../action/tests/java-repo autobuild-dir
+          # ... and fails if attempted in the current directory
+          echo > build.gradle
+      - uses: ./../action/init
+        with:
+          languages: java
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - uses: ./../action/autobuild
+        with:
+          working-directory: autobuild-dir
+      - uses: ./../action/analyze
+      - name: Check database
+        run: |
+          cd "$RUNNER_TEMP/codeql_databases"
+          if [[ ! -d java ]]; then
+            echo "Did not find a Java database"
+            exit 1
+          fi
+    env:
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__build-mode-autobuild.yml

@@ -0,0 +1,118 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: PR Check - Build mode autobuild
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs:
+      java-version:
+        type: string
+        description: The version of Java to install
+        required: false
+        default: "17"
+  workflow_call:
+    inputs:
+      java-version:
+        type: string
+        description: The version of Java to install
+        required: false
+        default: "17"
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: build-mode-autobuild-${{github.ref}}-${{inputs.java-version}}
+jobs:
+  build-mode-autobuild:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-26.04
+            version: linked
+          - os: windows-2025
+            version: linked
+          - os: ubuntu-26.04
+            version: nightly-latest
+          - os: windows-2025
+            version: nightly-latest
+    name: Build mode autobuild
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Install Java
+        uses: actions/setup-java@b843ebf9b913146b38da2eaa7aeddf76074ae1ad # v6.1.0
+        with:
+          java-version: ${{ inputs.java-version || '17' }}
+          distribution: temurin
+      - name: Install yq
+        if: runner.os == 'Windows'
+        env:
+          YQ_PATH: ${{ runner.temp }}/yq
+          YQ_VERSION: v4.50.1
+        run: |-
+          gh release download --repo mikefarah/yq --pattern "yq_windows_amd64.exe" "$YQ_VERSION" -O "$YQ_PATH/yq.exe"
+          echo "$YQ_PATH" >> "$GITHUB_PATH"
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "true"
+      - name: Set up Java test repo configuration
+        run: |
+          mv * .github ../action/tests/multi-language-repo/
+          mv ../action/tests/multi-language-repo/.github/workflows .github
+          mv ../action/tests/java-repo/* .
+
+      - uses: ./../action/init
+        id: init
+        with:
+          build-mode: autobuild
+          db-location: "${{ runner.temp }}/customDbLocation"
+          languages: java
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+
+      - name: Validate database build mode
+        run: |
+          metadata_path="$RUNNER_TEMP/customDbLocation/java/codeql-database.yml"
+          build_mode=$(yq eval '.buildMode' "$metadata_path")
+          if [[ "$build_mode" != "autobuild" ]]; then
+            echo "Expected build mode to be 'autobuild' but was $build_mode"
+            exit 1
+          fi
+
+      - name: Check that indirect tracing is disabled
+        run: |
+          if [[ ! -z "${CODEQL_RUNNER}" ]]; then
+            echo "Expected indirect tracing to be disabled, but the" \
+              "CODEQL_RUNNER environment variable is set."
+            exit 1
+          fi
+
+      - uses: ./../action/analyze
+    env:
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__build-mode-manual.yml

@@ -0,0 +1,107 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: PR Check - Build mode manual
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs:
+      dotnet-version:
+        type: string
+        description: The version of .NET to install
+        required: false
+        default: 9.x
+      go-version:
+        type: string
+        description: The version of Go to install
+        required: false
+        default: ">=1.21.0"
+  workflow_call:
+    inputs:
+      dotnet-version:
+        type: string
+        description: The version of .NET to install
+        required: false
+        default: 9.x
+      go-version:
+        type: string
+        description: The version of Go to install
+        required: false
+        default: ">=1.21.0"
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: build-mode-manual-${{github.ref}}-${{inputs.dotnet-version}}-${{inputs.go-version}}
+jobs:
+  build-mode-manual:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-26.04
+            version: nightly-latest
+    name: Build mode manual
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Install .NET
+        uses: actions/setup-dotnet@a98b56852c35b8e3190ac28c8c2271da59106c68 # v6.0.0
+        with:
+          dotnet-version: ${{ inputs.dotnet-version || '9.x' }}
+      - name: Install Go
+        uses: actions/setup-go@b7ad1dad31e06c5925ef5d2fc7ad053ef454303e # v7.0.0
+        with:
+          go-version: ${{ inputs.go-version || '>=1.21.0' }}
+          cache: false
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "true"
+      - uses: ./../action/init
+        id: init
+        with:
+          build-mode: manual
+          db-location: "${{ runner.temp }}/customDbLocation"
+          languages: java
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+
+      - name: Validate database build mode
+        run: |
+          metadata_path="$RUNNER_TEMP/customDbLocation/java/codeql-database.yml"
+          build_mode=$(yq eval '.buildMode' "$metadata_path")
+          if [[ "$build_mode" != "manual" ]]; then
+            echo "Expected build mode to be 'manual' but was $build_mode"
+            exit 1
+          fi
+
+      - name: Build code
+        run: ./build.sh
+
+      - uses: ./../action/analyze
+    env:
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__build-mode-none.yml

@@ -0,0 +1,81 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: PR Check - Build mode none
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs: {}
+  workflow_call:
+    inputs: {}
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: build-mode-none-${{github.ref}}
+jobs:
+  build-mode-none:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-26.04
+            version: linked
+          - os: ubuntu-26.04
+            version: nightly-latest
+    name: Build mode none
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "true"
+      - uses: ./../action/init
+        id: init
+        with:
+          build-mode: none
+          db-location: "${{ runner.temp }}/customDbLocation"
+          languages: java
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+
+      - name: Validate database build mode
+        run: |
+          metadata_path="$RUNNER_TEMP/customDbLocation/java/codeql-database.yml"
+          build_mode=$(yq eval '.buildMode' "$metadata_path")
+          if [[ "$build_mode" != "none" ]]; then
+            echo "Expected build mode to be 'none' but was $build_mode"
+            exit 1
+          fi
+
+      # The latest nightly supports omitting the autobuild Action when the build mode is specified.
+      - uses: ./../action/autobuild
+        if: matrix.version != 'nightly-latest'
+
+      - uses: ./../action/analyze
+    env:
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__build-mode-rollback.yml

@@ -0,0 +1,82 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: PR Check - Build mode rollback
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs: {}
+  workflow_call:
+    inputs: {}
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: build-mode-rollback-${{github.ref}}
+jobs:
+  build-mode-rollback:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-26.04
+            version: nightly-latest
+    name: Build mode rollback
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "true"
+      - name: Set up Java test repo configuration
+        run: |
+          mv * .github ../action/tests/multi-language-repo/
+          mv ../action/tests/multi-language-repo/.github/workflows .github
+          mv ../action/tests/java-repo/* .
+
+      - uses: ./../action/init
+        id: init
+        with:
+          build-mode: none
+          db-location: "${{ runner.temp }}/customDbLocation"
+          languages: java
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+
+      - name: Validate database build mode
+        run: |
+          metadata_path="$RUNNER_TEMP/customDbLocation/java/codeql-database.yml"
+          build_mode=$(yq eval '.buildMode' "$metadata_path")
+          if [[ "$build_mode" != "autobuild" ]]; then
+            echo "Expected build mode to be 'autobuild' but was $build_mode"
+            exit 1
+          fi
+
+      - uses: ./../action/analyze
+    env:
+      CODEQL_ACTION_DISABLE_JAVA_BUILDLESS: true
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__bundle-from-nightly.yml

@@ -0,0 +1,67 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: "PR Check - Bundle: From nightly"
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs: {}
+  workflow_call:
+    inputs: {}
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: bundle-from-nightly-${{github.ref}}
+jobs:
+  bundle-from-nightly:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-26.04
+            version: linked
+    name: "Bundle: From nightly"
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "true"
+      - id: init
+        uses: ./../action/init
+        env:
+          CODEQL_ACTION_FORCE_NIGHTLY: true
+        with:
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+          languages: javascript
+      - name: Fail if the CodeQL version is not a nightly
+        if: ${{ !contains(steps.init.outputs.codeql-version, '+') }}
+        run: exit 1
+    env:
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__bundle-from-toolcache.yml

@@ -0,0 +1,81 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: "PR Check - Bundle: From toolcache"
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs: {}
+  workflow_call:
+    inputs: {}
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: bundle-from-toolcache-${{github.ref}}
+jobs:
+  bundle-from-toolcache:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-26.04
+            version: toolcache
+    name: "Bundle: From toolcache"
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Install Node.js
+        uses: actions/setup-node@949feb2413d6458794dcd2491c4babbbce0c15c1 # v7.1.0
+        with:
+          node-version: 20.x
+          cache: npm
+      - name: Install newer npm
+        run: npm install -g npm@11.19.1
+      - name: Install dependencies
+        run: npm ci
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "true"
+      - name: Check toolcache contains CodeQL
+        continue-on-error: true
+        run: |
+          cd ./../action
+          npx tsx ./pr-checks/toolcache.ts installed
+
+      - id: setup-codeql
+        uses: ./../action/setup-codeql
+        with:
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+
+      - name: Check CodeQL is installed within the toolcache
+        run: |
+          cd ./../action
+          npx tsx ./pr-checks/toolcache.ts installed
+    env:
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__bundle-toolcache.yml

@@ -0,0 +1,96 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: "PR Check - Bundle: Caching checks"
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs: {}
+  workflow_call:
+    inputs: {}
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: bundle-toolcache-${{github.ref}}
+jobs:
+  bundle-toolcache:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-26.04
+            version: linked
+          - os: macos-26
+            version: linked
+          - os: windows-2025
+            version: linked
+    name: "Bundle: Caching checks"
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Install Node.js
+        uses: actions/setup-node@949feb2413d6458794dcd2491c4babbbce0c15c1 # v7.1.0
+        with:
+          node-version: 20.x
+          cache: npm
+      - name: Install newer npm
+        run: npm install -g npm@11.19.1
+      - name: Install dependencies
+        run: npm ci
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "true"
+      - name: Remove CodeQL from toolcache
+        run: |
+          cd ./../action
+          npx tsx ./pr-checks/toolcache.ts clear
+
+      - name: Check toolcache does not contain CodeQL
+        run: |
+          cd ./../action
+          npx tsx ./pr-checks/toolcache.ts absent
+
+      - id: init
+        uses: ./../action/init
+        with:
+          # Request multiple languages so this check uses the combined bundle.
+          languages: javascript,python
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+
+      - uses: ./../action/analyze
+        with:
+          output: ${{ runner.temp }}/results
+          upload-database: false
+
+      - name: Check CodeQL is installed within the toolcache
+        run: |
+          cd ./../action
+          npx tsx ./pr-checks/toolcache.ts installed -n 1
+    env:
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__cleanup-db-cluster-dir.yml

@@ -0,0 +1,77 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: PR Check - Clean up database cluster directory
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs: {}
+  workflow_call:
+    inputs: {}
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: cleanup-db-cluster-dir-${{github.ref}}
+jobs:
+  cleanup-db-cluster-dir:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-26.04
+            version: linked
+    name: Clean up database cluster directory
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "true"
+      - name: Add a file to the database cluster directory
+        run: |
+          mkdir -p "${{ runner.temp }}/customDbLocation/javascript"
+          touch "${{ runner.temp }}/customDbLocation/javascript/a-file-to-clean-up.txt"
+
+      - uses: ./../action/init
+        id: init
+        with:
+          build-mode: none
+          db-location: "${{ runner.temp }}/customDbLocation"
+          languages: javascript
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+
+      - name: Validate file cleaned up
+        run: |
+          if [[ -f "${{ runner.temp }}/customDbLocation/javascript/a-file-to-clean-up.txt" ]]; then
+            echo "File was not cleaned up"
+            exit 1
+          fi
+          echo "File was cleaned up"
+    env:
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__config-export.yml

@@ -0,0 +1,100 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: PR Check - Config export
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs: {}
+  workflow_call:
+    inputs: {}
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: config-export-${{github.ref}}
+jobs:
+  config-export:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-26.04
+            version: linked
+          - os: ubuntu-26.04
+            version: nightly-latest
+    name: Config export
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "true"
+      - uses: ./../action/init
+        with:
+          languages: javascript
+          queries: security-extended
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - uses: ./../action/analyze
+        with:
+          output: "${{ runner.temp }}/results"
+          upload-database: false
+      - name: Upload SARIF
+        uses: actions/upload-artifact@cf430e030ddbb5b0abf93d22962f4752f3646cd9 # v7.0.2
+        with:
+          name: config-export-${{ matrix.os }}-${{ matrix.version }}.sarif.json
+          path: "${{ runner.temp }}/results/javascript.sarif"
+          retention-days: 7
+      - name: Check config properties appear in SARIF
+        uses: actions/github-script@ed597411d8f924073f98dfc5c65a23a2325f34cd # v8.0.0
+        env:
+          SARIF_PATH: "${{ runner.temp }}/results/javascript.sarif"
+        with:
+          script: |
+            const fs = require('fs');
+
+            const sarif = JSON.parse(fs.readFileSync(process.env['SARIF_PATH'], 'utf8'));
+            const run = sarif.runs[0];
+            const configSummary = run.properties.codeqlConfigSummary;
+
+            if (configSummary === undefined) {
+              core.setFailed('`codeqlConfigSummary` property not found in the SARIF run property bag.');
+            }
+            if (configSummary.disableDefaultQueries !== false) {
+              core.setFailed('`disableDefaultQueries` property incorrect: expected false, got ' +
+                `${JSON.stringify(configSummary.disableDefaultQueries)}.`);
+            }
+            const expectedQueries = [{ type: 'builtinSuite', uses: 'security-extended' }];
+            // Use JSON.stringify to deep-equal the arrays.
+            if (JSON.stringify(configSummary.queries) !== JSON.stringify(expectedQueries)) {
+              core.setFailed(`\`queries\` property incorrect: expected ${JSON.stringify(expectedQueries)}, got ` +
+                `${JSON.stringify(configSummary.queries)}.`);
+            }
+            core.info('Finished config export tests.');
+    env:
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__config-input.yml

@@ -0,0 +1,94 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: PR Check - Config input
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs: {}
+  workflow_call:
+    inputs: {}
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: config-input-${{github.ref}}
+jobs:
+  config-input:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-26.04
+            version: linked
+    name: Config input
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Install Node.js
+        uses: actions/setup-node@949feb2413d6458794dcd2491c4babbbce0c15c1 # v7.1.0
+        with:
+          node-version: 20.x
+          cache: npm
+      - name: Install newer npm
+        run: npm install -g npm@11.19.1
+      - name: Install dependencies
+        run: npm ci
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "true"
+      - name: Copy queries into workspace
+        run: |
+          cp -a ../action/queries .
+
+      - uses: ./../action/init
+        with:
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+          languages: javascript
+          build-mode: none
+          config: |
+            disable-default-queries: true
+            queries:
+              - name: Run custom query
+                uses: ./queries/default-setup-environment-variables.ql
+            paths-ignore:
+              - tests
+              - lib
+
+      - uses: ./../action/analyze
+        with:
+          output: ${{ runner.temp }}/results
+
+      - name: Check SARIF
+        uses: ./../action/.github/actions/check-sarif
+        with:
+          sarif-file: ${{ runner.temp }}/results/javascript.sarif
+          queries-run: javascript/codeql-action/default-setup-env-vars
+          queries-not-run: javascript/codeql-action/default-setup-context-properties
+    env:
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__cpp-deptrace-disabled.yml

@@ -0,0 +1,79 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: "PR Check - C/C++: disabling autoinstalling dependencies (Linux)"
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs: {}
+  workflow_call:
+    inputs: {}
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: cpp-deptrace-disabled-${{github.ref}}
+jobs:
+  cpp-deptrace-disabled:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-26.04
+            version: linked
+          - os: ubuntu-26.04
+            version: default
+          - os: ubuntu-26.04
+            version: nightly-latest
+    name: "C/C++: disabling autoinstalling dependencies (Linux)"
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "true"
+      - name: Test setup
+        run: |
+          cp -a ../action/tests/cpp-autobuild autobuild-dir
+      - uses: ./../action/init
+        with:
+          languages: cpp
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - uses: ./../action/autobuild
+        with:
+          working-directory: autobuild-dir
+        env:
+          CODEQL_EXTRACTOR_CPP_AUTOINSTALL_DEPENDENCIES: false
+      - run: |
+          if ls /usr/bin/errno; then
+            echo "C/C++ autobuild installed errno, but it should not have since auto-install dependencies is disabled."
+            exit 1
+          fi
+    env:
+      DOTNET_GENERATE_ASPNET_CERTIFICATE: "false"
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__cpp-deptrace-enabled-on-macos.yml

@@ -0,0 +1,79 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: "PR Check - C/C++: autoinstalling dependencies is skipped (macOS)"
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs: {}
+  workflow_call:
+    inputs: {}
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: cpp-deptrace-enabled-on-macos-${{github.ref}}
+jobs:
+  cpp-deptrace-enabled-on-macos:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: macos-26
+            version: linked
+          - os: macos-26
+            version: nightly-latest
+    name: "C/C++: autoinstalling dependencies is skipped (macOS)"
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "true"
+      - name: Test setup
+        run: |
+          cp -a ../action/tests/cpp-autobuild autobuild-dir
+      - uses: ./../action/init
+        with:
+          languages: cpp
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - uses: ./../action/autobuild
+        with:
+          working-directory: autobuild-dir
+        env:
+          CODEQL_EXTRACTOR_CPP_AUTOINSTALL_DEPENDENCIES: true
+      - run: |
+          if ! ls /usr/bin/errno; then
+            echo "As expected, CODEQL_EXTRACTOR_CPP_AUTOINSTALL_DEPENDENCIES is a no-op on macOS"
+          else
+            echo "CODEQL_EXTRACTOR_CPP_AUTOINSTALL_DEPENDENCIES should not have had any effect on macOS"
+            exit 1
+          fi
+    env:
+      DOTNET_GENERATE_ASPNET_CERTIFICATE: "false"
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__cpp-deptrace-enabled.yml

@@ -0,0 +1,79 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: "PR Check - C/C++: autoinstalling dependencies (Linux)"
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs: {}
+  workflow_call:
+    inputs: {}
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: cpp-deptrace-enabled-${{github.ref}}
+jobs:
+  cpp-deptrace-enabled:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-26.04
+            version: linked
+          - os: ubuntu-26.04
+            version: default
+          - os: ubuntu-26.04
+            version: nightly-latest
+    name: "C/C++: autoinstalling dependencies (Linux)"
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "true"
+      - name: Test setup
+        run: |
+          cp -a ../action/tests/cpp-autobuild autobuild-dir
+      - uses: ./../action/init
+        with:
+          languages: cpp
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - uses: ./../action/autobuild
+        with:
+          working-directory: autobuild-dir
+        env:
+          CODEQL_EXTRACTOR_CPP_AUTOINSTALL_DEPENDENCIES: true
+      - run: |
+          if ! ls /usr/bin/errno; then
+            echo "Did not autoinstall errno"
+            exit 1
+          fi
+    env:
+      DOTNET_GENERATE_ASPNET_CERTIFICATE: "false"
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__diagnostics-export.yml

@@ -0,0 +1,102 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: PR Check - Diagnostic export
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs: {}
+  workflow_call:
+    inputs: {}
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: diagnostics-export-${{github.ref}}
+jobs:
+  diagnostics-export:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-26.04
+            version: linked
+          - os: ubuntu-26.04
+            version: nightly-latest
+    name: Diagnostic export
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Install Node.js
+        uses: actions/setup-node@949feb2413d6458794dcd2491c4babbbce0c15c1 # v7.1.0
+        with:
+          node-version: 20.x
+          cache: npm
+      - name: Install newer npm
+        run: npm install -g npm@11.19.1
+      - name: Install dependencies
+        run: npm ci
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "true"
+      - uses: ./../action/init
+        id: init
+        with:
+          languages: javascript
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - name: Add test diagnostics
+        env:
+          CODEQL_PATH: ${{ steps.init.outputs.codeql-path }}
+        run: |
+          "$CODEQL_PATH" database add-diagnostic \
+            "$RUNNER_TEMP/codeql_databases/javascript" \
+            --file-path /path/to/file \
+            --plaintext-message "Plaintext message" \
+            --source-id "lang/diagnostics/example" \
+            --source-name "Diagnostic name" \
+            --ready-for-status-page
+      - uses: ./../action/analyze
+        with:
+          output: "${{ runner.temp }}/results"
+          upload-database: false
+      - name: Upload SARIF
+        uses: actions/upload-artifact@cf430e030ddbb5b0abf93d22962f4752f3646cd9 # v7.0.2
+        with:
+          name: diagnostics-export-${{ matrix.os }}-${{ matrix.version }}.sarif.json
+          path: "${{ runner.temp }}/results/javascript.sarif"
+          retention-days: 7
+
+      - name: Check diagnostics appear in SARIF
+        env:
+          SARIF_PATH: "${{ runner.temp }}/results/javascript.sarif"
+        run: |
+          cd ../action
+          npx tsx ./pr-checks/check-diagnostics.ts
+    env:
+      CODEQL_ACTION_EXPORT_DIAGNOSTICS: true
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__diagnostics-without-db.yml

@@ -0,0 +1,143 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: PR Check - Diagnostic export without database
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs: {}
+  workflow_call:
+    inputs: {}
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: diagnostics-without-db-${{github.ref}}
+jobs:
+  diagnostics-without-db:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-26.04
+            version: linked
+    name: Diagnostic export without database
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      # We deliberately need to make this step fail before the database is initialised, but after
+      # some diagnostic has been produced. The simplest way to do that right now is to:
+      #
+      # - Produce a diagnostic before the db is initialised by forcing the use of a nightly release
+      #   with the `CODEQL_ACTION_FORCE_NIGHTLY` feature flag.
+      # - Cause `init` to abort because we are attempting to analyse Swift on a non-macOS runner.
+      #
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Install Node.js
+        uses: actions/setup-node@949feb2413d6458794dcd2491c4babbbce0c15c1 # v7.1.0
+        with:
+          node-version: 20.x
+          cache: npm
+      - name: Install newer npm
+        run: npm install -g npm@11.19.1
+      - name: Install dependencies
+        run: npm ci
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "true"
+      - name: Initialise failing analysis
+        id: init
+        uses: ./../action/init
+        continue-on-error: true
+        env:
+          CODEQL_ACTION_FORCE_NIGHTLY: true
+        with:
+          languages: swift
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+
+      - name: Analyze
+        uses: ./analyze
+        # In a real workflow, this step wouldn't run. Since we used `continue-on-error`
+        # above, we manually disable it with an `if` condition. Having this step is required
+        # for the init post-action because it checks the workflow definition for e.g. the
+        # `category` input. Without this step, that part of the init post-action would fail.
+        if: false
+        with:
+          category: "/test-codeql-version:${{ matrix.version }}"
+
+      - name: Check diagnostics appear on disk
+        env:
+          DIAGNOSTICS_DIR: "${{ runner.temp }}/codeql-action-temp-diagnostics/"
+        run: |
+          cd ../action
+          npx tsx ./pr-checks/diagnostics-without-db.ts
+    env:
+      CODEQL_ACTION_SKIP_GENERATE_FAILED_SARIF: false
+      CODEQL_ACTION_SKIP_SARIF_UPLOAD: true
+      CODEQL_ACTION_TESTING_ENVIRONMENT: codeql-action-pr-checks
+      CODEQL_ACTION_TEST_MODE: true
+  diagnostics-without-db-validation:
+    if: github.triggering_actor != 'dependabot[bot]'
+    needs:
+      - diagnostics-without-db
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 5
+    runs-on: ubuntu-26.04
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Install Node.js
+        uses: actions/setup-node@949feb2413d6458794dcd2491c4babbbce0c15c1 # v7.1.0
+        with:
+          node-version: 20.x
+          cache: npm
+      - name: Install newer npm
+        run: npm install -g npm@11.19.1
+      - name: Install dependencies
+        run: npm ci
+      - name: Download workflow artifact
+        uses: actions/download-artifact@9000827ccba6bdab643e8b6fd33ac0654aef8333 # v8.0.2
+        with:
+          pattern: test-mode-sarif-*
+          path: sarif
+
+      - name: List artifact contents
+        run: ls -laR ./sarif
+
+      - name: Check diagnostics appear in SARIF
+        env:
+          SARIF_PATH: "./sarif/codeql-failed-run.sarif"
+          DIAGNOSTIC_ID: "codeql-action/forced-nightly-cli"
+          DIAGNOSTIC_NAME: "A nightly release of CodeQL was used"
+          EXPECTED_LOCATIONS: "0"
+          EXPECTED_MESSAGE: |
+            GitHub configured this analysis to use a nightly release of CodeQL to allow you to preview changes from an upcoming release.
+        run: npx tsx ./pr-checks/check-diagnostics.ts
+    env:
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__export-file-baseline-information.yml

@@ -0,0 +1,132 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: PR Check - Export file baseline information
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs:
+      dotnet-version:
+        type: string
+        description: The version of .NET to install
+        required: false
+        default: 9.x
+      go-version:
+        type: string
+        description: The version of Go to install
+        required: false
+        default: ">=1.21.0"
+  workflow_call:
+    inputs:
+      dotnet-version:
+        type: string
+        description: The version of .NET to install
+        required: false
+        default: 9.x
+      go-version:
+        type: string
+        description: The version of Go to install
+        required: false
+        default: ">=1.21.0"
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: export-file-baseline-information-${{github.ref}}-${{inputs.dotnet-version}}-${{inputs.go-version}}
+jobs:
+  export-file-baseline-information:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-26.04
+            version: nightly-latest
+          - os: macos-26
+            version: nightly-latest
+          - os: windows-2025
+            version: nightly-latest
+    name: Export file baseline information
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Install .NET
+        uses: actions/setup-dotnet@a98b56852c35b8e3190ac28c8c2271da59106c68 # v6.0.0
+        with:
+          dotnet-version: ${{ inputs.dotnet-version || '9.x' }}
+      - name: Install Go
+        uses: actions/setup-go@b7ad1dad31e06c5925ef5d2fc7ad053ef454303e # v7.0.0
+        with:
+          go-version: ${{ inputs.go-version || '>=1.21.0' }}
+          cache: false
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "true"
+      - uses: ./../action/init
+        id: init
+        with:
+          languages: javascript
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+          # To balance speed and coverage, analyze only JavaScript but use the combined bundle so
+          # baseline information is reported for every language in the multi-language repository. A
+          # custom configuration prevents per-language bundles from being used.
+          config: |
+            paths-ignore: []
+      - name: Build code
+        run: ./build.sh
+      - uses: ./../action/analyze
+        with:
+          output: "${{ runner.temp }}/results"
+      - name: Upload SARIF
+        uses: actions/upload-artifact@cf430e030ddbb5b0abf93d22962f4752f3646cd9 # v7.0.2
+        with:
+          name: with-baseline-information-${{ matrix.os }}-${{ matrix.version }}.sarif.json
+          path: "${{ runner.temp }}/results/javascript.sarif"
+          retention-days: 7
+      - name: Check results
+        run: |
+          cd "$RUNNER_TEMP/results"
+          expected_baseline_languages="c csharp go java kotlin javascript python ruby"
+          if [[ $RUNNER_OS == "macOS" ]]; then
+            expected_baseline_languages+=" swift"
+          fi
+
+          for lang in ${expected_baseline_languages}; do
+            rule_name="cli/expected-extracted-files/${lang}"
+            found_notification=$(jq --arg rule_name "${rule_name}" '[.runs[0].tool.driver.notifications |
+              select(. != null) | flatten | .[].id] | any(. == $rule_name)' javascript.sarif)
+            if [[ "${found_notification}" != "true" ]]; then
+              echo "Expected SARIF output to contain notification '${rule_name}', but found no such notification."
+              exit 1
+            else
+              echo "Found notification '${rule_name}'."
+            fi
+          done
+    env:
+      CODEQL_ACTION_SKIP_FILE_COVERAGE_ON_PRS: false
+      CODEQL_ACTION_SUBLANGUAGE_FILE_COVERAGE: true
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__extractor-ram-threads.yml

@@ -0,0 +1,80 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: PR Check - Extractor ram and threads options test
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs: {}
+  workflow_call:
+    inputs: {}
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: extractor-ram-threads-${{github.ref}}
+jobs:
+  extractor-ram-threads:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-26.04
+            version: linked
+    name: Extractor ram and threads options test
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "true"
+      - uses: ./../action/init
+        with:
+          languages: java
+          ram: 230
+          threads: 1
+      - name: Assert Results
+        run: |
+          if [ "${CODEQL_RAM}" != "230" ]; then
+            echo "CODEQL_RAM is '${CODEQL_RAM}' instead of 230"
+            exit 1
+          fi
+          if [ "${CODEQL_EXTRACTOR_JAVA_RAM}" != "230" ]; then
+            echo "CODEQL_EXTRACTOR_JAVA_RAM is '${CODEQL_EXTRACTOR_JAVA_RAM}' instead of 230"
+            exit 1
+          fi
+          if [ "${CODEQL_THREADS}" != "1" ]; then
+            echo "CODEQL_THREADS is '${CODEQL_THREADS}' instead of 1"
+            exit 1
+          fi
+          if [ "${CODEQL_EXTRACTOR_JAVA_THREADS}" != "1" ]; then
+            echo "CODEQL_EXTRACTOR_JAVA_THREADS is '${CODEQL_EXTRACTOR_JAVA_THREADS}' instead of 1"
+            exit 1
+          fi
+    env:
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__global-proxy.yml

@@ -0,0 +1,101 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: PR Check - Proxy test
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs: {}
+  workflow_call:
+    inputs: {}
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: global-proxy-${{github.ref}}
+jobs:
+  global-proxy:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-26.04
+            version: linked
+          - os: ubuntu-26.04
+            version: nightly-latest
+    name: Proxy test
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "false"
+      - name: Block direct internet access to force proxy usage
+        run: |
+          apt-get update -qq && apt-get install -y -qq iptables >/dev/null 2>&1
+          PROXY_IP=$(getent hosts squid-proxy | awk '{ print $1 }')
+          echo "Squid proxy IP: $PROXY_IP"
+          # Allow all traffic to the proxy container
+          iptables -A OUTPUT -d "$PROXY_IP" -j ACCEPT
+          # Allow DNS resolution
+          iptables -A OUTPUT -p udp --dport 53 -j ACCEPT
+          iptables -A OUTPUT -p tcp --dport 53 -j ACCEPT
+          # Allow loopback
+          iptables -A OUTPUT -o lo -j ACCEPT
+          # Allow already-established connections (from checkout/prepare-test)
+          iptables -A OUTPUT -m conntrack --ctstate ESTABLISHED,RELATED -j ACCEPT
+          # Block all other outbound HTTP and HTTPS, ensuring direct access fails
+          iptables -A OUTPUT -p tcp --dport 80 -j REJECT --reject-with tcp-reset
+          iptables -A OUTPUT -p tcp --dport 443 -j REJECT --reject-with tcp-reset
+          echo "Direct HTTP/HTTPS access is now blocked - all traffic must go through the proxy"
+
+      - name: Set proxy environment variables
+        shell: bash
+        run: |
+          echo "http_proxy=http://squid-proxy:3128" >> $GITHUB_ENV
+          echo "HTTP_PROXY=http://squid-proxy:3128" >> $GITHUB_ENV
+          echo "https_proxy=http://squid-proxy:3128" >> $GITHUB_ENV
+          echo "HTTPS_PROXY=http://squid-proxy:3128" >> $GITHUB_ENV
+
+      - uses: ./../action/init
+        with:
+          languages: javascript
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+
+      - uses: ./../action/analyze
+    env:
+      CODEQL_ACTION_TOLERATE_MISSING_GIT_VERSION: true
+      CODEQL_ACTION_TEST_MODE: true
+    container:
+      image: ubuntu:22.04
+      options: --cap-add=NET_ADMIN
+    services:
+      squid-proxy:
+        image: ubuntu/squid:latest
+        ports:
+          - 3128:3128

.github/workflows/__go-custom-queries.yml

@@ -0,0 +1,97 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: "PR Check - Go: Custom queries"
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs:
+      dotnet-version:
+        type: string
+        description: The version of .NET to install
+        required: false
+        default: 9.x
+      go-version:
+        type: string
+        description: The version of Go to install
+        required: false
+        default: ">=1.21.0"
+  workflow_call:
+    inputs:
+      dotnet-version:
+        type: string
+        description: The version of .NET to install
+        required: false
+        default: 9.x
+      go-version:
+        type: string
+        description: The version of Go to install
+        required: false
+        default: ">=1.21.0"
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: go-custom-queries-${{github.ref}}-${{inputs.dotnet-version}}-${{inputs.go-version}}
+jobs:
+  go-custom-queries:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-26.04
+            version: linked
+          - os: ubuntu-26.04
+            version: nightly-latest
+    name: "Go: Custom queries"
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Install .NET
+        uses: actions/setup-dotnet@a98b56852c35b8e3190ac28c8c2271da59106c68 # v6.0.0
+        with:
+          dotnet-version: ${{ inputs.dotnet-version || '9.x' }}
+      - name: Install Go
+        uses: actions/setup-go@b7ad1dad31e06c5925ef5d2fc7ad053ef454303e # v7.0.0
+        with:
+          go-version: ${{ inputs.go-version || '>=1.21.0' }}
+          cache: false
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "true"
+      - uses: ./../action/init
+        with:
+          languages: go
+          config-file: ./.github/codeql/custom-queries.yml
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - name: Build code
+        run: ./build.sh
+      - uses: ./../action/analyze
+    env:
+      DOTNET_GENERATE_ASPNET_CERTIFICATE: "false"
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__go-indirect-tracing-workaround-diagnostic.yml

@@ -0,0 +1,109 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: "PR Check - Go: diagnostic when Go is changed after init step"
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs:
+      go-version:
+        type: string
+        description: The version of Go to install
+        required: false
+        default: ">=1.21.0"
+  workflow_call:
+    inputs:
+      go-version:
+        type: string
+        description: The version of Go to install
+        required: false
+        default: ">=1.21.0"
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: go-indirect-tracing-workaround-diagnostic-${{github.ref}}-${{inputs.go-version}}
+jobs:
+  go-indirect-tracing-workaround-diagnostic:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-26.04
+            version: default
+    name: "Go: diagnostic when Go is changed after init step"
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Install Go
+        uses: actions/setup-go@b7ad1dad31e06c5925ef5d2fc7ad053ef454303e # v7.0.0
+        with:
+          go-version: ${{ inputs.go-version || '>=1.21.0' }}
+          cache: false
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "true"
+      - uses: ./../action/init
+        with:
+          languages: go
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      # Deliberately change Go after the `init` step
+      - uses: actions/setup-go@b7ad1dad31e06c5925ef5d2fc7ad053ef454303e # v7.0.0
+        with:
+          go-version: "1.20"
+      - name: Build code
+        run: go build main.go
+      - uses: ./../action/analyze
+        with:
+          output: "${{ runner.temp }}/results"
+          upload-database: false
+      - name: Check diagnostic appears in SARIF
+        uses: actions/github-script@ed597411d8f924073f98dfc5c65a23a2325f34cd # v8.0.0
+        env:
+          SARIF_PATH: "${{ runner.temp }}/results/go.sarif"
+        with:
+          script: |
+            const fs = require('fs');
+
+            const sarif = JSON.parse(fs.readFileSync(process.env['SARIF_PATH'], 'utf8'));
+            const run = sarif.runs[0];
+
+            const toolExecutionNotifications = run.invocations[0].toolExecutionNotifications;
+            const statusPageNotifications = toolExecutionNotifications.filter(n =>
+              n.descriptor.id === 'go/workflow/go-installed-after-codeql-init' && n.properties?.visibility?.statusPage
+            );
+            if (statusPageNotifications.length !== 1) {
+              core.setFailed(
+                'Expected exactly one status page reporting descriptor for this diagnostic in the ' +
+                  `'runs[].invocations[].toolExecutionNotifications[]' SARIF property, but found ` +
+                  `${statusPageNotifications.length}. All notification reporting descriptors: ` +
+                  `${JSON.stringify(toolExecutionNotifications)}.`
+              );
+            }
+    env:
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__go-indirect-tracing-workaround-no-file-program.yml

@@ -0,0 +1,110 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: "PR Check - Go: diagnostic when `file` is not installed"
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs:
+      go-version:
+        type: string
+        description: The version of Go to install
+        required: false
+        default: ">=1.21.0"
+  workflow_call:
+    inputs:
+      go-version:
+        type: string
+        description: The version of Go to install
+        required: false
+        default: ">=1.21.0"
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: go-indirect-tracing-workaround-no-file-program-${{github.ref}}-${{inputs.go-version}}
+jobs:
+  go-indirect-tracing-workaround-no-file-program:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-26.04
+            version: default
+    name: "Go: diagnostic when `file` is not installed"
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Install Go
+        uses: actions/setup-go@b7ad1dad31e06c5925ef5d2fc7ad053ef454303e # v7.0.0
+        with:
+          go-version: ${{ inputs.go-version || '>=1.21.0' }}
+          cache: false
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "true"
+      - name: Remove `file` program
+        run: |
+          echo $(which file)
+          sudo rm -rf $(which file)
+          echo $(which file)
+      - uses: ./../action/init
+        with:
+          languages: go
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - name: Build code
+        run: go build main.go
+      - uses: ./../action/analyze
+        with:
+          output: "${{ runner.temp }}/results"
+          upload-database: false
+      - name: Check diagnostic appears in SARIF
+        uses: actions/github-script@ed597411d8f924073f98dfc5c65a23a2325f34cd # v8.0.0
+        env:
+          SARIF_PATH: "${{ runner.temp }}/results/go.sarif"
+        with:
+          script: |
+            const fs = require('fs');
+
+            const sarif = JSON.parse(fs.readFileSync(process.env['SARIF_PATH'], 'utf8'));
+            const run = sarif.runs[0];
+
+            const toolExecutionNotifications = run.invocations[0].toolExecutionNotifications;
+            const statusPageNotifications = toolExecutionNotifications.filter(n =>
+              n.descriptor.id === 'go/workflow/file-program-unavailable' && n.properties?.visibility?.statusPage
+            );
+            if (statusPageNotifications.length !== 1) {
+              core.setFailed(
+                'Expected exactly one status page reporting descriptor for this diagnostic in the ' +
+                  `'runs[].invocations[].toolExecutionNotifications[]' SARIF property, but found ` +
+                  `${statusPageNotifications.length}. All notification reporting descriptors: ` +
+                  `${JSON.stringify(toolExecutionNotifications)}.`
+              );
+            }
+    env:
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__go-indirect-tracing-workaround.yml

@@ -0,0 +1,104 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: "PR Check - Go: workaround for indirect tracing"
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs:
+      go-version:
+        type: string
+        description: The version of Go to install
+        required: false
+        default: ">=1.21.0"
+  workflow_call:
+    inputs:
+      go-version:
+        type: string
+        description: The version of Go to install
+        required: false
+        default: ">=1.21.0"
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: go-indirect-tracing-workaround-${{github.ref}}-${{inputs.go-version}}
+jobs:
+  go-indirect-tracing-workaround:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-26.04
+            version: default
+    name: "Go: workaround for indirect tracing"
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Install Go
+        uses: actions/setup-go@b7ad1dad31e06c5925ef5d2fc7ad053ef454303e # v7.0.0
+        with:
+          go-version: ${{ inputs.go-version || '>=1.21.0' }}
+          cache: false
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "true"
+      - uses: ./../action/init
+        with:
+          languages: go
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - name: Build code
+        run: go build main.go
+      - uses: ./../action/analyze
+      - run: |
+          if [[ -z "${CODEQL_ACTION_GO_BINARY}" ]]; then
+            echo "Expected the workaround for indirect tracing of static binaries to trigger, but the" \
+              "CODEQL_ACTION_GO_BINARY environment variable is not set."
+            exit 1
+          fi
+          if [[ ! -f "${CODEQL_ACTION_GO_BINARY}" ]]; then
+            echo "CODEQL_ACTION_GO_BINARY is set, but the corresponding script does not exist."
+            exit 1
+          fi
+
+
+          # Once we start running Bash 4.2 in all environments, we can replace the
+          # `! -z` flag with the more elegant `-v` which confirms that the variable
+          # is actually unset and not potentially set to a blank value.
+          if [[ ! -z "${CODEQL_ACTION_DID_AUTOBUILD_GOLANG}" ]]; then
+            echo "Expected the Go autobuilder not to be run, but the" \
+              "CODEQL_ACTION_DID_AUTOBUILD_GOLANG environment variable was set."
+            exit 1
+          fi
+          cd "$RUNNER_TEMP/codeql_databases"
+          if [[ ! -d go ]]; then
+            echo "Did not find a Go database"
+            exit 1
+          fi
+    env:
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__go-tracing-autobuilder.yml

@@ -0,0 +1,110 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: "PR Check - Go: tracing with autobuilder step"
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs:
+      go-version:
+        type: string
+        description: The version of Go to install
+        required: false
+        default: ">=1.21.0"
+  workflow_call:
+    inputs:
+      go-version:
+        type: string
+        description: The version of Go to install
+        required: false
+        default: ">=1.21.0"
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: go-tracing-autobuilder-${{github.ref}}-${{inputs.go-version}}
+jobs:
+  go-tracing-autobuilder:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-24.04
+            version: stable-v2.20.7
+          - os: ubuntu-26.04
+            version: stable-v2.21.4
+          - os: ubuntu-26.04
+            version: stable-v2.22.4
+          - os: ubuntu-26.04
+            version: stable-v2.23.9
+          - os: ubuntu-26.04
+            version: stable-v2.24.3
+          - os: ubuntu-26.04
+            version: stable-v2.25.6
+          - os: ubuntu-26.04
+            version: default
+          - os: ubuntu-26.04
+            version: linked
+          - os: macos-26
+            version: linked
+          - os: ubuntu-26.04
+            version: nightly-latest
+          - os: macos-26
+            version: nightly-latest
+    name: "Go: tracing with autobuilder step"
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Install Go
+        uses: actions/setup-go@b7ad1dad31e06c5925ef5d2fc7ad053ef454303e # v7.0.0
+        with:
+          go-version: ${{ inputs.go-version || '>=1.21.0' }}
+          cache: false
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "true"
+      - uses: ./../action/init
+        with:
+          languages: go
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - uses: ./../action/autobuild
+      - uses: ./../action/analyze
+      - run: |
+          if [[ "${CODEQL_ACTION_DID_AUTOBUILD_GOLANG}" != true ]]; then
+            echo "Expected the Go autobuilder to be run, but the" \
+              "CODEQL_ACTION_DID_AUTOBUILD_GOLANG environment variable was not true."
+            exit 1
+          fi
+          cd "$RUNNER_TEMP/codeql_databases"
+          if [[ ! -d go ]]; then
+            echo "Did not find a Go database"
+            exit 1
+          fi
+    env:
+      DOTNET_GENERATE_ASPNET_CERTIFICATE: "false"
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__go-tracing-custom-build-steps.yml

@@ -0,0 +1,113 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: "PR Check - Go: tracing with custom build steps"
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs:
+      go-version:
+        type: string
+        description: The version of Go to install
+        required: false
+        default: ">=1.21.0"
+  workflow_call:
+    inputs:
+      go-version:
+        type: string
+        description: The version of Go to install
+        required: false
+        default: ">=1.21.0"
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: go-tracing-custom-build-steps-${{github.ref}}-${{inputs.go-version}}
+jobs:
+  go-tracing-custom-build-steps:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-24.04
+            version: stable-v2.20.7
+          - os: ubuntu-26.04
+            version: stable-v2.21.4
+          - os: ubuntu-26.04
+            version: stable-v2.22.4
+          - os: ubuntu-26.04
+            version: stable-v2.23.9
+          - os: ubuntu-26.04
+            version: stable-v2.24.3
+          - os: ubuntu-26.04
+            version: stable-v2.25.6
+          - os: ubuntu-26.04
+            version: default
+          - os: ubuntu-26.04
+            version: linked
+          - os: macos-26
+            version: linked
+          - os: ubuntu-26.04
+            version: nightly-latest
+          - os: macos-26
+            version: nightly-latest
+    name: "Go: tracing with custom build steps"
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Install Go
+        uses: actions/setup-go@b7ad1dad31e06c5925ef5d2fc7ad053ef454303e # v7.0.0
+        with:
+          go-version: ${{ inputs.go-version || '>=1.21.0' }}
+          cache: false
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "true"
+      - uses: ./../action/init
+        with:
+          languages: go
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - name: Build code
+        run: go build main.go
+      - uses: ./../action/analyze
+      - run: |
+          # Once we start running Bash 4.2 in all environments, we can replace the
+          # `! -z` flag with the more elegant `-v` which confirms that the variable
+          # is actually unset and not potentially set to a blank value.
+          if [[ ! -z "${CODEQL_ACTION_DID_AUTOBUILD_GOLANG}" ]]; then
+            echo "Expected the Go autobuilder not to be run, but the" \
+              "CODEQL_ACTION_DID_AUTOBUILD_GOLANG environment variable was set."
+            exit 1
+          fi
+          cd "$RUNNER_TEMP/codeql_databases"
+          if [[ ! -d go ]]; then
+            echo "Did not find a Go database"
+            exit 1
+          fi
+    env:
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__go-tracing-legacy-workflow.yml

@@ -0,0 +1,104 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: "PR Check - Go: tracing with legacy workflow"
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs:
+      go-version:
+        type: string
+        description: The version of Go to install
+        required: false
+        default: ">=1.21.0"
+  workflow_call:
+    inputs:
+      go-version:
+        type: string
+        description: The version of Go to install
+        required: false
+        default: ">=1.21.0"
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: go-tracing-legacy-workflow-${{github.ref}}-${{inputs.go-version}}
+jobs:
+  go-tracing-legacy-workflow:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-24.04
+            version: stable-v2.20.7
+          - os: ubuntu-26.04
+            version: stable-v2.21.4
+          - os: ubuntu-26.04
+            version: stable-v2.22.4
+          - os: ubuntu-26.04
+            version: stable-v2.23.9
+          - os: ubuntu-26.04
+            version: stable-v2.24.3
+          - os: ubuntu-26.04
+            version: stable-v2.25.6
+          - os: ubuntu-26.04
+            version: default
+          - os: ubuntu-26.04
+            version: linked
+          - os: macos-26
+            version: linked
+          - os: ubuntu-26.04
+            version: nightly-latest
+          - os: macos-26
+            version: nightly-latest
+    name: "Go: tracing with legacy workflow"
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Install Go
+        uses: actions/setup-go@b7ad1dad31e06c5925ef5d2fc7ad053ef454303e # v7.0.0
+        with:
+          go-version: ${{ inputs.go-version || '>=1.21.0' }}
+          cache: false
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "true"
+      - uses: ./../action/init
+        with:
+          languages: go
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - uses: ./../action/analyze
+      - run: |
+          cd "$RUNNER_TEMP/codeql_databases"
+          if [[ ! -d go ]]; then
+            echo "Did not find a Go database"
+            exit 1
+          fi
+    env:
+      DOTNET_GENERATE_ASPNET_CERTIFICATE: "false"
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__go.yml

@@ -19,10 +19,10 @@ on:
         type: string
         description: The version of Go to install
         required: false
-        default: '>=1.21.0'
+        default: ">=1.21.0"
 jobs:
   go-custom-queries:
-    name: 'Go: Custom queries'
+    name: "Go: Custom queries"
     permissions:
       contents: read
       security-events: read
@@ -31,7 +31,7 @@ jobs:
       dotnet-version: ${{ inputs.dotnet-version }}
       go-version: ${{ inputs.go-version }}
   go-indirect-tracing-workaround-diagnostic:
-    name: 'Go: diagnostic when Go is changed after init step'
+    name: "Go: diagnostic when Go is changed after init step"
     permissions:
       contents: read
       security-events: read
@@ -39,7 +39,7 @@ jobs:
     with:
       go-version: ${{ inputs.go-version }}
   go-indirect-tracing-workaround-no-file-program:
-    name: 'Go: diagnostic when `file` is not installed'
+    name: "Go: diagnostic when `file` is not installed"
     permissions:
       contents: read
       security-events: read
@@ -47,7 +47,7 @@ jobs:
     with:
       go-version: ${{ inputs.go-version }}
   go-indirect-tracing-workaround:
-    name: 'Go: workaround for indirect tracing'
+    name: "Go: workaround for indirect tracing"
     permissions:
       contents: read
       security-events: read
@@ -55,7 +55,7 @@ jobs:
     with:
       go-version: ${{ inputs.go-version }}
   go-tracing-autobuilder:
-    name: 'Go: tracing with autobuilder step'
+    name: "Go: tracing with autobuilder step"
     permissions:
       contents: read
       security-events: read
@@ -63,7 +63,7 @@ jobs:
     with:
       go-version: ${{ inputs.go-version }}
   go-tracing-custom-build-steps:
-    name: 'Go: tracing with custom build steps'
+    name: "Go: tracing with custom build steps"
     permissions:
       contents: read
       security-events: read
@@ -71,7 +71,7 @@ jobs:
     with:
       go-version: ${{ inputs.go-version }}
   go-tracing-legacy-workflow:
-    name: 'Go: tracing with legacy workflow'
+    name: "Go: tracing with legacy workflow"
     permissions:
       contents: read
       security-events: read

.github/workflows/__init-with-registries.yml

@@ -0,0 +1,119 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: "PR Check - Packaging: Download using registries"
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs: {}
+  workflow_call:
+    inputs: {}
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: init-with-registries-${{github.ref}}
+jobs:
+  init-with-registries:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-26.04
+            version: default
+          - os: ubuntu-26.04
+            version: linked
+          - os: ubuntu-26.04
+            version: nightly-latest
+    name: "Packaging: Download using registries"
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      packages: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "true"
+      - name: Init with registries
+        uses: ./../action/init
+        with:
+          db-location: "${{ runner.temp }}/customDbLocation"
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+          config-file: ./.github/codeql/codeql-config-registries.yml
+          languages: javascript
+          registries: |
+            - url: "https://ghcr.io/v2/"
+              packages: "*/*"
+              token: "${{ secrets.GITHUB_TOKEN }}"
+
+      - name: Verify packages installed
+        run: |
+          PRIVATE_PACK="$HOME/.codeql/packages/codeql-testing/private-pack"
+          CODEQL_PACK1="$HOME/.codeql/packages/codeql-testing/codeql-pack1"
+
+          if [[ -d $PRIVATE_PACK ]]
+          then
+              echo "$PRIVATE_PACK was installed."
+          else
+              echo "::error $PRIVATE_PACK pack was not installed."
+              exit 1
+          fi
+
+          if [[ -d $CODEQL_PACK1 ]]
+          then
+              echo "$CODEQL_PACK1 was installed."
+          else
+              echo "::error $CODEQL_PACK1 pack was not installed."
+              exit 1
+          fi
+
+      - name: Verify qlconfig.yml file was created
+        run: |
+          QLCONFIG_PATH=$RUNNER_TEMP/qlconfig.yml
+          echo "Expected qlconfig.yml file to be created at $QLCONFIG_PATH"
+          if [[ -f $QLCONFIG_PATH ]]
+          then
+              echo "qlconfig.yml file was created."
+          else
+              echo "::error qlconfig.yml file was not created."
+              exit 1
+          fi
+
+      - name: Verify contents of qlconfig.yml
+        run: |
+          QLCONFIG_PATH=$RUNNER_TEMP/qlconfig.yml
+          cat $QLCONFIG_PATH | yq -e '.registries[] | select(.url == "https://ghcr.io/v2/") | select(.packages == "*/*")'
+          if [[ $? -eq 0 ]]
+          then
+              echo "Registry was added to qlconfig.yml file."
+          else
+              echo "::error Registry was not added to qlconfig.yml file."
+              echo "Contents of qlconfig.yml file:"
+              cat $QLCONFIG_PATH
+              exit 1
+          fi
+    env:
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__javascript-source-root.yml

@@ -0,0 +1,80 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: PR Check - Custom source root
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs: {}
+  workflow_call:
+    inputs: {}
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: javascript-source-root-${{github.ref}}
+jobs:
+  javascript-source-root:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-26.04
+            version: linked
+          - os: ubuntu-26.04
+            version: default
+          - os: ubuntu-26.04
+            version: nightly-latest
+    name: Custom source root
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "true"
+      - name: Move codeql-action
+        run: |
+          mkdir ../new-source-root
+          mv * ../new-source-root
+      - uses: ./../action/init
+        with:
+          languages: javascript
+          source-root: ../new-source-root
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - uses: ./../action/analyze
+        with:
+          skip-queries: true
+      - name: Assert database exists
+        run: |
+          cd "$RUNNER_TEMP/codeql_databases"
+          if [[ ! -d javascript ]]; then
+            echo "Did not find a JavaScript database"
+            exit 1
+          fi
+    env:
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__job-run-uuid-sarif.yml

@@ -0,0 +1,81 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: PR Check - Job run UUID added to SARIF
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs: {}
+  workflow_call:
+    inputs: {}
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: job-run-uuid-sarif-${{github.ref}}
+jobs:
+  job-run-uuid-sarif:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-26.04
+            version: nightly-latest
+    name: Job run UUID added to SARIF
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "true"
+      - uses: ./../action/init
+        id: init
+        with:
+          languages: javascript
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - uses: ./../action/analyze
+        with:
+          output: "${{ runner.temp }}/results"
+      - name: Upload SARIF
+        uses: actions/upload-artifact@cf430e030ddbb5b0abf93d22962f4752f3646cd9 # v7.0.2
+        with:
+          name: ${{ matrix.os }}-${{ matrix.version }}.sarif.json
+          path: "${{ runner.temp }}/results/javascript.sarif"
+          retention-days: 7
+      - name: Check results
+        run: |
+          cd "$RUNNER_TEMP/results"
+          actual=$(jq -r '.runs[0].properties.jobRunUuid' javascript.sarif)
+          if [[ "$actual" != "$CODEQL_ACTION_JOB_RUN_UUID" ]]; then
+            echo "Expected SARIF output to contain job run UUID '$CODEQL_ACTION_JOB_RUN_UUID', but found '$actual'."
+            exit 1
+          else
+            echo "Found job run UUID '$actual'."
+          fi
+    env:
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__language-aliases.yml

@@ -0,0 +1,72 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: PR Check - Language aliases
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs: {}
+  workflow_call:
+    inputs: {}
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: language-aliases-${{github.ref}}
+jobs:
+  language-aliases:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-26.04
+            version: linked
+    name: Language aliases
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "true"
+      - uses: ./../action/init
+        with:
+          languages: C#,java-kotlin,typescript
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+
+      - name: "Check languages"
+        run: |
+          expected_languages="csharp,java,javascript"
+          actual_languages=$(jq -r '.languages | join(",")' "$RUNNER_TEMP"/config)
+
+          if [ "$expected_languages" != "$actual_languages" ]; then
+            echo "Resolved languages did not match expected list. " \
+              "Expected languages: $expected_languages. Actual languages: $actual_languages."
+            exit 1
+          fi
+    env:
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__linux-arm64.yml

@@ -0,0 +1,106 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: PR Check - Linux Arm64
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs:
+      dotnet-version:
+        type: string
+        description: The version of .NET to install
+        required: false
+        default: 9.x
+      go-version:
+        type: string
+        description: The version of Go to install
+        required: false
+        default: ">=1.21.0"
+  workflow_call:
+    inputs:
+      dotnet-version:
+        type: string
+        description: The version of .NET to install
+        required: false
+        default: 9.x
+      go-version:
+        type: string
+        description: The version of Go to install
+        required: false
+        default: ">=1.21.0"
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: linux-arm64-${{github.ref}}-${{inputs.dotnet-version}}-${{inputs.go-version}}
+jobs:
+  linux-arm64:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-24.04-arm
+            version: nightly-latest
+    name: Linux Arm64
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Install .NET
+        uses: actions/setup-dotnet@a98b56852c35b8e3190ac28c8c2271da59106c68 # v6.0.0
+        with:
+          dotnet-version: ${{ inputs.dotnet-version || '9.x' }}
+      - name: Install Go
+        uses: actions/setup-go@b7ad1dad31e06c5925ef5d2fc7ad053ef454303e # v7.0.0
+        with:
+          go-version: ${{ inputs.go-version || '>=1.21.0' }}
+          cache: false
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "true"
+      - uses: ./../action/init
+        with:
+          languages: ${{ env.LANGUAGES }}
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - name: Build code
+        run: ./build.sh
+      - uses: ./../action/analyze
+        with:
+          upload-database: false
+      - name: Assert databases exist
+        run: |
+          cd "$RUNNER_TEMP/codeql_databases"
+          for lang in ${LANGUAGES//,/ }; do
+            if [[ ! -d "$lang" ]]; then
+              echo "Did not find a database for $lang"
+              exit 1
+            fi
+            echo "Found database for $lang"
+          done
+    env:
+      LANGUAGES: cpp,csharp,go,java,javascript,python,ruby
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__local-bundle.yml

@@ -0,0 +1,98 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: PR Check - Local CodeQL bundle
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs:
+      dotnet-version:
+        type: string
+        description: The version of .NET to install
+        required: false
+        default: 9.x
+      go-version:
+        type: string
+        description: The version of Go to install
+        required: false
+        default: ">=1.21.0"
+  workflow_call:
+    inputs:
+      dotnet-version:
+        type: string
+        description: The version of .NET to install
+        required: false
+        default: 9.x
+      go-version:
+        type: string
+        description: The version of Go to install
+        required: false
+        default: ">=1.21.0"
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: local-bundle-${{github.ref}}-${{inputs.dotnet-version}}-${{inputs.go-version}}
+jobs:
+  local-bundle:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-26.04
+            version: linked
+    name: Local CodeQL bundle
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Install .NET
+        uses: actions/setup-dotnet@a98b56852c35b8e3190ac28c8c2271da59106c68 # v6.0.0
+        with:
+          dotnet-version: ${{ inputs.dotnet-version || '9.x' }}
+      - name: Install Go
+        uses: actions/setup-go@b7ad1dad31e06c5925ef5d2fc7ad053ef454303e # v7.0.0
+        with:
+          go-version: ${{ inputs.go-version || '>=1.21.0' }}
+          cache: false
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "true"
+      - name: Fetch latest CodeQL bundle
+        run: |
+          wget https://github.com/github/codeql-action/releases/latest/download/codeql-bundle-linux64.tar.zst
+      - id: init
+        uses: ./../action/init
+        with:
+          # Swift is not supported on Ubuntu so we manually exclude it from the list here
+          languages: cpp,csharp,go,java,javascript,python,ruby
+          tools: ./codeql-bundle-linux64.tar.zst
+      - name: Build code
+        run: ./build.sh
+      - uses: ./../action/analyze
+    env:
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__multi-language-autodetect.yml

@@ -0,0 +1,196 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: PR Check - Multi-language repository
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs:
+      dotnet-version:
+        type: string
+        description: The version of .NET to install
+        required: false
+        default: 9.x
+      go-version:
+        type: string
+        description: The version of Go to install
+        required: false
+        default: ">=1.21.0"
+  workflow_call:
+    inputs:
+      dotnet-version:
+        type: string
+        description: The version of .NET to install
+        required: false
+        default: 9.x
+      go-version:
+        type: string
+        description: The version of Go to install
+        required: false
+        default: ">=1.21.0"
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: multi-language-autodetect-${{github.ref}}-${{inputs.dotnet-version}}-${{inputs.go-version}}
+jobs:
+  multi-language-autodetect:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-24.04
+            version: stable-v2.20.7
+          - os: macos-15-xlarge
+            version: stable-v2.20.7
+          - os: ubuntu-26.04
+            version: stable-v2.21.4
+          - os: macos-15-xlarge
+            version: stable-v2.21.4
+          - os: ubuntu-26.04
+            version: stable-v2.22.4
+          - os: macos-15-xlarge
+            version: stable-v2.22.4
+          - os: ubuntu-26.04
+            version: stable-v2.23.9
+          - os: macos-26-xlarge
+            version: stable-v2.23.9
+          - os: ubuntu-26.04
+            version: stable-v2.24.3
+          - os: macos-26-xlarge
+            version: stable-v2.24.3
+          - os: ubuntu-26.04
+            version: stable-v2.25.6
+          - os: macos-26-xlarge
+            version: stable-v2.25.6
+          - os: ubuntu-26.04
+            version: default
+          - os: macos-26-xlarge
+            version: default
+          - os: ubuntu-26.04
+            version: linked
+          - os: macos-26-xlarge
+            version: linked
+          - os: ubuntu-26.04
+            version: nightly-latest
+          - os: macos-26-xlarge
+            version: nightly-latest
+    name: Multi-language repository
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Install .NET
+        uses: actions/setup-dotnet@a98b56852c35b8e3190ac28c8c2271da59106c68 # v6.0.0
+        with:
+          dotnet-version: ${{ inputs.dotnet-version || '9.x' }}
+      - name: Install Go
+        uses: actions/setup-go@b7ad1dad31e06c5925ef5d2fc7ad053ef454303e # v7.0.0
+        with:
+          go-version: ${{ inputs.go-version || '>=1.21.0' }}
+          cache: false
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "true"
+      - name: Install Python 3.13.15 for older CLI versions
+        # Older CLI versions don't work with Python 3.13.16 or newer because their Python extractor
+        # imports `importlib._bootstrap._ERR_MSG`, which those Python versions no longer define.
+        # See https://github.com/github/codeql-action/pull/3212
+        if: matrix.version != 'nightly-latest' && matrix.version != 'linked'
+        uses: actions/setup-python@6d4fd22b20465ccc0f7354476588e8df7c9ca0e0 # v7.1.0
+        with:
+          python-version: "3.13.15"
+
+      - name: Use Xcode 16
+        # Only the older CodeQL CLI versions need Xcode 16, and these run on macOS 15.
+        if: matrix.os == 'macos-15-xlarge'
+        run: sudo xcode-select -s "/Applications/Xcode_16.app"
+
+      - uses: ./../action/init
+        id: init
+        with:
+          db-location: "${{ runner.temp }}/customDbLocation"
+          languages: ${{ runner.os == 'Linux' && 'cpp,csharp,go,java,javascript,python,ruby' || '' }}
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+
+      - name: Build code
+        run: ./build.sh
+
+      - uses: ./../action/analyze
+        id: analysis
+        with:
+          upload-database: false
+
+      - name: Check language autodetect for all languages excluding Swift
+        run: |
+          CPP_DB=${{ fromJson(steps.analysis.outputs.db-locations).cpp }}
+          if [[ ! -d $CPP_DB ]] || [[ ! $CPP_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
+            echo "Did not create a database for CPP, or created it in the wrong location."
+            exit 1
+          fi
+          CSHARP_DB=${{ fromJson(steps.analysis.outputs.db-locations).csharp }}
+          if [[ ! -d $CSHARP_DB ]] || [[ ! $CSHARP_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
+            echo "Did not create a database for C Sharp, or created it in the wrong location."
+            exit 1
+          fi
+          GO_DB=${{ fromJson(steps.analysis.outputs.db-locations).go }}
+          if [[ ! -d $GO_DB ]] || [[ ! $GO_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
+            echo "Did not create a database for Go, or created it in the wrong location."
+            exit 1
+          fi
+          JAVA_DB=${{ fromJson(steps.analysis.outputs.db-locations).java }}
+          if [[ ! -d $JAVA_DB ]] || [[ ! $JAVA_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
+            echo "Did not create a database for Java, or created it in the wrong location."
+            exit 1
+          fi
+          JAVASCRIPT_DB=${{ fromJson(steps.analysis.outputs.db-locations).javascript }}
+          if [[ ! -d $JAVASCRIPT_DB ]] || [[ ! $JAVASCRIPT_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
+            echo "Did not create a database for Javascript, or created it in the wrong location."
+            exit 1
+          fi
+          PYTHON_DB=${{ fromJson(steps.analysis.outputs.db-locations).python }}
+          if [[ ! -d $PYTHON_DB ]] || [[ ! $PYTHON_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
+            echo "Did not create a database for Python, or created it in the wrong location."
+            exit 1
+          fi
+          RUBY_DB=${{ fromJson(steps.analysis.outputs.db-locations).ruby }}
+          if [[ ! -d $RUBY_DB ]] || [[ ! $RUBY_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
+            echo "Did not create a database for Ruby, or created it in the wrong location."
+            exit 1
+          fi
+
+      - name: Check language autodetect for Swift on macOS
+        if: runner.os == 'macOS'
+        run: |
+          SWIFT_DB=${{ fromJson(steps.analysis.outputs.db-locations).swift }}
+          if [[ ! -d $SWIFT_DB ]] || [[ ! $SWIFT_DB == ${{ runner.temp }}/customDbLocation/* ]]; then
+            echo "Did not create a database for Swift, or created it in the wrong location."
+            exit 1
+          fi
+    env:
+      CODEQL_ACTION_RESOLVE_SUPPORTED_LANGUAGES_USING_CLI: true
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__overlay-init-fallback.yml

@@ -0,0 +1,76 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: PR Check - Overlay database init fallback
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs: {}
+  workflow_call:
+    inputs: {}
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: overlay-init-fallback-${{github.ref}}
+jobs:
+  overlay-init-fallback:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-26.04
+            version: linked
+          - os: ubuntu-26.04
+            version: nightly-latest
+    name: Overlay database init fallback
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "true"
+      - uses: ./../action/init
+        with:
+          languages: actions # Any language without overlay support will do
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+        env:
+          CODEQL_OVERLAY_DATABASE_MODE: overlay-base
+      - uses: ./../action/analyze
+        id: analysis
+        with:
+          upload-database: false
+      - name: Check database
+        run: |
+          cd "$RUNNER_TEMP/codeql_databases/actions"
+          if ! grep -q 'overlayBaseDatabase: false' codeql-database.yml ; then
+            echo "This test needs to be updated to use a non-overlay language."
+            exit 1
+          fi
+    env:
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__packaging-codescanning-config-inputs-js.yml

@@ -0,0 +1,132 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: "PR Check - Packaging: Config and input passed to the CLI"
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs:
+      dotnet-version:
+        type: string
+        description: The version of .NET to install
+        required: false
+        default: 9.x
+      go-version:
+        type: string
+        description: The version of Go to install
+        required: false
+        default: ">=1.21.0"
+  workflow_call:
+    inputs:
+      dotnet-version:
+        type: string
+        description: The version of .NET to install
+        required: false
+        default: 9.x
+      go-version:
+        type: string
+        description: The version of Go to install
+        required: false
+        default: ">=1.21.0"
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: packaging-codescanning-config-inputs-js-${{github.ref}}-${{inputs.dotnet-version}}-${{inputs.go-version}}
+jobs:
+  packaging-codescanning-config-inputs-js:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-26.04
+            version: linked
+          - os: ubuntu-26.04
+            version: default
+          - os: ubuntu-26.04
+            version: nightly-latest
+    name: "Packaging: Config and input passed to the CLI"
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Install .NET
+        uses: actions/setup-dotnet@a98b56852c35b8e3190ac28c8c2271da59106c68 # v6.0.0
+        with:
+          dotnet-version: ${{ inputs.dotnet-version || '9.x' }}
+      - name: Install Go
+        uses: actions/setup-go@b7ad1dad31e06c5925ef5d2fc7ad053ef454303e # v7.0.0
+        with:
+          go-version: ${{ inputs.go-version || '>=1.21.0' }}
+          cache: false
+      - name: Install Node.js
+        uses: actions/setup-node@949feb2413d6458794dcd2491c4babbbce0c15c1 # v7.1.0
+        with:
+          node-version: 20.x
+          cache: npm
+      - name: Install newer npm
+        run: npm install -g npm@11.19.1
+      - name: Install dependencies
+        run: npm ci
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "true"
+      - uses: ./../action/init
+        with:
+          config-file: ".github/codeql/codeql-config-packaging3.yml"
+          packs: +codeql-testing/codeql-pack1@1.0.0
+          languages: javascript
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - name: Build code
+        run: ./build.sh
+      - uses: ./../action/analyze
+        with:
+          output: "${{ runner.temp }}/results"
+          upload-database: false
+
+      - name: Check results
+        uses: ./../action/.github/actions/check-sarif
+        with:
+          sarif-file: ${{ runner.temp }}/results/javascript.sarif
+          queries-run: javascript/example/empty-or-one-block,javascript/example/empty-or-one-block,javascript/example/other-query-block,javascript/example/two-block
+          queries-not-run: foo,bar
+
+      - name: Assert Results
+        run: |
+          cd "$RUNNER_TEMP/results"
+          # We should have 4 hits from these rules
+          EXPECTED_RULES="javascript/example/empty-or-one-block javascript/example/empty-or-one-block javascript/example/other-query-block javascript/example/two-block"
+
+          # use tr to replace newlines with spaces and xargs to trim leading and trailing whitespace
+          RULES="$(cat javascript.sarif | jq -r '.runs[0].results[].ruleId' | sort | tr "\n\r" " " | xargs)"
+          echo "Found matching rules '$RULES'"
+          if [ "$RULES" != "$EXPECTED_RULES" ]; then
+            echo "Did not match expected rules '$EXPECTED_RULES'."
+            exit 1
+          fi
+    env:
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__packaging-config-inputs-js.yml

@@ -0,0 +1,132 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: "PR Check - Packaging: Config and input"
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs:
+      dotnet-version:
+        type: string
+        description: The version of .NET to install
+        required: false
+        default: 9.x
+      go-version:
+        type: string
+        description: The version of Go to install
+        required: false
+        default: ">=1.21.0"
+  workflow_call:
+    inputs:
+      dotnet-version:
+        type: string
+        description: The version of .NET to install
+        required: false
+        default: 9.x
+      go-version:
+        type: string
+        description: The version of Go to install
+        required: false
+        default: ">=1.21.0"
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: packaging-config-inputs-js-${{github.ref}}-${{inputs.dotnet-version}}-${{inputs.go-version}}
+jobs:
+  packaging-config-inputs-js:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-26.04
+            version: linked
+          - os: ubuntu-26.04
+            version: default
+          - os: ubuntu-26.04
+            version: nightly-latest
+    name: "Packaging: Config and input"
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Install .NET
+        uses: actions/setup-dotnet@a98b56852c35b8e3190ac28c8c2271da59106c68 # v6.0.0
+        with:
+          dotnet-version: ${{ inputs.dotnet-version || '9.x' }}
+      - name: Install Go
+        uses: actions/setup-go@b7ad1dad31e06c5925ef5d2fc7ad053ef454303e # v7.0.0
+        with:
+          go-version: ${{ inputs.go-version || '>=1.21.0' }}
+          cache: false
+      - name: Install Node.js
+        uses: actions/setup-node@949feb2413d6458794dcd2491c4babbbce0c15c1 # v7.1.0
+        with:
+          node-version: 20.x
+          cache: npm
+      - name: Install newer npm
+        run: npm install -g npm@11.19.1
+      - name: Install dependencies
+        run: npm ci
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "true"
+      - uses: ./../action/init
+        with:
+          config-file: ".github/codeql/codeql-config-packaging3.yml"
+          packs: +codeql-testing/codeql-pack1@1.0.0
+          languages: javascript
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - name: Build code
+        run: ./build.sh
+      - uses: ./../action/analyze
+        with:
+          output: "${{ runner.temp }}/results"
+          upload-database: false
+
+      - name: Check results
+        uses: ./../action/.github/actions/check-sarif
+        with:
+          sarif-file: ${{ runner.temp }}/results/javascript.sarif
+          queries-run: javascript/example/empty-or-one-block,javascript/example/empty-or-one-block,javascript/example/other-query-block,javascript/example/two-block
+          queries-not-run: foo,bar
+
+      - name: Assert Results
+        run: |
+          cd "$RUNNER_TEMP/results"
+          # We should have 4 hits from these rules
+          EXPECTED_RULES="javascript/example/empty-or-one-block javascript/example/empty-or-one-block javascript/example/other-query-block javascript/example/two-block"
+
+          # use tr to replace newlines with spaces and xargs to trim leading and trailing whitespace
+          RULES="$(cat javascript.sarif | jq -r '.runs[0].results[].ruleId' | sort | tr "\n\r" " " | xargs)"
+          echo "Found matching rules '$RULES'"
+          if [ "$RULES" != "$EXPECTED_RULES" ]; then
+            echo "Did not match expected rules '$EXPECTED_RULES'."
+            exit 1
+          fi
+    env:
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__packaging-config-js.yml

@@ -0,0 +1,131 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: "PR Check - Packaging: Config file"
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs:
+      dotnet-version:
+        type: string
+        description: The version of .NET to install
+        required: false
+        default: 9.x
+      go-version:
+        type: string
+        description: The version of Go to install
+        required: false
+        default: ">=1.21.0"
+  workflow_call:
+    inputs:
+      dotnet-version:
+        type: string
+        description: The version of .NET to install
+        required: false
+        default: 9.x
+      go-version:
+        type: string
+        description: The version of Go to install
+        required: false
+        default: ">=1.21.0"
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: packaging-config-js-${{github.ref}}-${{inputs.dotnet-version}}-${{inputs.go-version}}
+jobs:
+  packaging-config-js:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-26.04
+            version: linked
+          - os: ubuntu-26.04
+            version: default
+          - os: ubuntu-26.04
+            version: nightly-latest
+    name: "Packaging: Config file"
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Install .NET
+        uses: actions/setup-dotnet@a98b56852c35b8e3190ac28c8c2271da59106c68 # v6.0.0
+        with:
+          dotnet-version: ${{ inputs.dotnet-version || '9.x' }}
+      - name: Install Go
+        uses: actions/setup-go@b7ad1dad31e06c5925ef5d2fc7ad053ef454303e # v7.0.0
+        with:
+          go-version: ${{ inputs.go-version || '>=1.21.0' }}
+          cache: false
+      - name: Install Node.js
+        uses: actions/setup-node@949feb2413d6458794dcd2491c4babbbce0c15c1 # v7.1.0
+        with:
+          node-version: 20.x
+          cache: npm
+      - name: Install newer npm
+        run: npm install -g npm@11.19.1
+      - name: Install dependencies
+        run: npm ci
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "true"
+      - uses: ./../action/init
+        with:
+          config-file: ".github/codeql/codeql-config-packaging.yml"
+          languages: javascript
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - name: Build code
+        run: ./build.sh
+      - uses: ./../action/analyze
+        with:
+          output: "${{ runner.temp }}/results"
+          upload-database: false
+
+      - name: Check results
+        uses: ./../action/.github/actions/check-sarif
+        with:
+          sarif-file: ${{ runner.temp }}/results/javascript.sarif
+          queries-run: javascript/example/empty-or-one-block,javascript/example/empty-or-one-block,javascript/example/other-query-block,javascript/example/two-block
+          queries-not-run: foo,bar
+
+      - name: Assert Results
+        run: |
+          cd "$RUNNER_TEMP/results"
+          # We should have 4 hits from these rules
+          EXPECTED_RULES="javascript/example/empty-or-one-block javascript/example/empty-or-one-block javascript/example/other-query-block javascript/example/two-block"
+
+          # use tr to replace newlines with spaces and xargs to trim leading and trailing whitespace
+          RULES="$(cat javascript.sarif | jq -r '.runs[0].results[].ruleId' | sort | tr "\n\r" " " | xargs)"
+          echo "Found matching rules '$RULES'"
+          if [ "$RULES" != "$EXPECTED_RULES" ]; then
+            echo "Did not match expected rules '$EXPECTED_RULES'."
+            exit 1
+          fi
+    env:
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__packaging-inputs-js.yml

@@ -0,0 +1,131 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: "PR Check - Packaging: Action input"
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs:
+      dotnet-version:
+        type: string
+        description: The version of .NET to install
+        required: false
+        default: 9.x
+      go-version:
+        type: string
+        description: The version of Go to install
+        required: false
+        default: ">=1.21.0"
+  workflow_call:
+    inputs:
+      dotnet-version:
+        type: string
+        description: The version of .NET to install
+        required: false
+        default: 9.x
+      go-version:
+        type: string
+        description: The version of Go to install
+        required: false
+        default: ">=1.21.0"
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: packaging-inputs-js-${{github.ref}}-${{inputs.dotnet-version}}-${{inputs.go-version}}
+jobs:
+  packaging-inputs-js:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-26.04
+            version: linked
+          - os: ubuntu-26.04
+            version: default
+          - os: ubuntu-26.04
+            version: nightly-latest
+    name: "Packaging: Action input"
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Install .NET
+        uses: actions/setup-dotnet@a98b56852c35b8e3190ac28c8c2271da59106c68 # v6.0.0
+        with:
+          dotnet-version: ${{ inputs.dotnet-version || '9.x' }}
+      - name: Install Go
+        uses: actions/setup-go@b7ad1dad31e06c5925ef5d2fc7ad053ef454303e # v7.0.0
+        with:
+          go-version: ${{ inputs.go-version || '>=1.21.0' }}
+          cache: false
+      - name: Install Node.js
+        uses: actions/setup-node@949feb2413d6458794dcd2491c4babbbce0c15c1 # v7.1.0
+        with:
+          node-version: 20.x
+          cache: npm
+      - name: Install newer npm
+        run: npm install -g npm@11.19.1
+      - name: Install dependencies
+        run: npm ci
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "true"
+      - uses: ./../action/init
+        with:
+          config-file: ".github/codeql/codeql-config-packaging2.yml"
+          languages: javascript
+          packs: codeql-testing/codeql-pack1@1.0.0, codeql-testing/codeql-pack2, codeql-testing/codeql-pack3:other-query.ql
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - name: Build code
+        run: ./build.sh
+      - uses: ./../action/analyze
+        with:
+          output: "${{ runner.temp }}/results"
+
+      - name: Check results
+        uses: ./../action/.github/actions/check-sarif
+        with:
+          sarif-file: ${{ runner.temp }}/results/javascript.sarif
+          queries-run: javascript/example/empty-or-one-block,javascript/example/empty-or-one-block,javascript/example/other-query-block,javascript/example/two-block
+          queries-not-run: foo,bar
+
+      - name: Assert Results
+        run: |
+          cd "$RUNNER_TEMP/results"
+          # We should have 4 hits from these rules
+          EXPECTED_RULES="javascript/example/empty-or-one-block javascript/example/empty-or-one-block javascript/example/other-query-block javascript/example/two-block"
+
+          # use tr to replace newlines with spaces and xargs to trim leading and trailing whitespace
+          RULES="$(cat javascript.sarif | jq -r '.runs[0].results[].ruleId' | sort | tr "\n\r" " " | xargs)"
+          echo "Found matching rules '$RULES'"
+          if [ "$RULES" != "$EXPECTED_RULES" ]; then
+            echo "Did not match expected rules '$EXPECTED_RULES'."
+            exit 1
+          fi
+    env:
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__per-language-bundle-validation.yml

@@ -0,0 +1,175 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: PR Check - Per-language bundles
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs: {}
+  workflow_call:
+    inputs: {}
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: per-language-bundle-validation-${{github.ref}}
+jobs:
+  per-language-bundle-validation:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - language: actions
+            os: ubuntu-26.04
+            version: linked
+            expected-extractors: actions javascript
+          - language: cpp
+            os: ubuntu-26.04
+            version: linked
+            build-mode: manual
+            build-command: gcc -o main main.c
+          - language: csharp
+            os: ubuntu-26.04
+            version: linked
+            build-mode: none
+          - language: go
+            os: ubuntu-26.04
+            version: linked
+            build-mode: autobuild
+          - language: java
+            os: ubuntu-26.04
+            version: linked
+            build-mode: none
+          - language: javascript
+            os: ubuntu-26.04
+            version: linked
+          - language: python
+            os: ubuntu-26.04
+            version: linked
+          - language: ruby
+            os: ubuntu-26.04
+            version: linked
+          - language: rust
+            os: ubuntu-26.04
+            version: linked
+          - language: swift
+            os: macos-26-xlarge
+            version: linked
+            build-mode: autobuild
+    name: Per-language bundles
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Install Node.js
+        uses: actions/setup-node@949feb2413d6458794dcd2491c4babbbce0c15c1 # v7.1.0
+        with:
+          node-version: 20.x
+          cache: npm
+      - name: Install newer npm
+        run: npm install -g npm@11.19.1
+      - name: Install dependencies
+        run: npm ci
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "true"
+      - name: Remove CodeQL from toolcache
+        run: |
+          cd ./../action
+          npx tsx ./pr-checks/toolcache.ts clear
+      - uses: ./../action/init
+        id: init
+        with:
+          languages: ${{ matrix.language }}
+          build-mode: ${{ matrix['build-mode'] }}
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - name: Check that the bundle contains only the expected extractors
+        env:
+          CODEQL_PATH: ${{ steps.init.outputs.codeql-path }}
+          LANGUAGE: ${{ matrix.language }}
+          EXPECTED_EXTRACTORS: ${{ matrix['expected-extractors'] || matrix.language }}
+        run: |
+          extractors="$("$CODEQL_PATH" resolve languages --format=json | jq -r 'keys[]')"
+          echo "Extractors in the bundle:"
+          echo "$extractors"
+          echo "Expected: $EXPECTED_EXTRACTORS"
+
+          for expected in $EXPECTED_EXTRACTORS; do
+            if ! echo "$extractors" | grep -qx "$expected"; then
+              echo "::error::The ${LANGUAGE} bundle does not contain the ${expected} extractor."
+              exit 1
+            fi
+          done
+
+          # If the bundle contained extractors beyond those the language needs, then it would not
+          # have been trimmed, and this job would be silently validating the combined bundle.
+          for other in actions cpp csharp go java javascript python ruby rust swift; do
+            if echo "$EXPECTED_EXTRACTORS" | grep -qw "$other"; then
+              continue
+            fi
+            if echo "$extractors" | grep -qx "$other"; then
+              echo "::error::The ${LANGUAGE} bundle also contains the ${other} extractor, so it is not trimmed."
+              exit 1
+            fi
+          done
+      - name: Check that the bundle was not added to the toolcache
+        env:
+          CODEQL_PATH: ${{ steps.init.outputs.codeql-path }}
+        run: |
+          # A bundle that is missing most of its extractors must never be left in the toolcache,
+          # where a later job analyzing a different language could pick it up. Per-language bundles
+          # must instead be extracted under the runner's temporary directory.
+          echo "CodeQL is at $CODEQL_PATH"
+          if [[ "$CODEQL_PATH" == "$RUNNER_TOOL_CACHE"/* ]]; then
+            echo "::error::The per-language bundle was added to the toolcache at $CODEQL_PATH."
+            exit 1
+          fi
+          if [[ "$CODEQL_PATH" != "$RUNNER_TEMP"/* ]]; then
+            echo "::error::Expected the per-language bundle to be extracted under $RUNNER_TEMP, but found it at $CODEQL_PATH."
+            exit 1
+          fi
+      - name: Build code
+        if: matrix['build-command']
+        run: ${{ matrix['build-command'] }}
+      - uses: ./../action/analyze
+        id: analysis
+        with:
+          upload-database: false
+      - name: Check that a database was created for the language
+        env:
+          DB_LOCATIONS: ${{ steps.analysis.outputs.db-locations }}
+          LANGUAGE: ${{ matrix.language }}
+        run: |
+          database="$(echo "$DB_LOCATIONS" | jq -r --arg lang "$LANGUAGE" '.[$lang] // empty')"
+          if [ -z "$database" ] || [ ! -d "$database" ]; then
+            echo "::error::No CodeQL database was created for ${LANGUAGE}."
+            echo "Databases: $DB_LOCATIONS"
+            exit 1
+          fi
+          echo "Created a ${LANGUAGE} database at ${database}."
+    env:
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__remote-config.yml

@@ -0,0 +1,96 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: PR Check - Remote config file
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs:
+      dotnet-version:
+        type: string
+        description: The version of .NET to install
+        required: false
+        default: 9.x
+      go-version:
+        type: string
+        description: The version of Go to install
+        required: false
+        default: ">=1.21.0"
+  workflow_call:
+    inputs:
+      dotnet-version:
+        type: string
+        description: The version of .NET to install
+        required: false
+        default: 9.x
+      go-version:
+        type: string
+        description: The version of Go to install
+        required: false
+        default: ">=1.21.0"
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: remote-config-${{github.ref}}-${{inputs.dotnet-version}}-${{inputs.go-version}}
+jobs:
+  remote-config:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-26.04
+            version: linked
+          - os: ubuntu-26.04
+            version: nightly-latest
+    name: Remote config file
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Install .NET
+        uses: actions/setup-dotnet@a98b56852c35b8e3190ac28c8c2271da59106c68 # v6.0.0
+        with:
+          dotnet-version: ${{ inputs.dotnet-version || '9.x' }}
+      - name: Install Go
+        uses: actions/setup-go@b7ad1dad31e06c5925ef5d2fc7ad053ef454303e # v7.0.0
+        with:
+          go-version: ${{ inputs.go-version || '>=1.21.0' }}
+          cache: false
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "true"
+      - uses: ./../action/init
+        with:
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+          languages: cpp,csharp,java,javascript,python
+          config-file: ${{ github.repository }}/tests/multi-language-repo/.github/codeql/custom-queries.yml@${{ github.sha }}
+      - name: Build code
+        run: ./build.sh
+      - uses: ./../action/analyze
+    env:
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__resolve-environment-action.yml

@@ -0,0 +1,85 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: PR Check - Resolve environment
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs: {}
+  workflow_call:
+    inputs: {}
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: resolve-environment-action-${{github.ref}}
+jobs:
+  resolve-environment-action:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-26.04
+            version: linked
+          - os: ubuntu-26.04
+            version: default
+          - os: ubuntu-26.04
+            version: nightly-latest
+    name: Resolve environment
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "true"
+      - uses: ./../action/init
+        with:
+          languages: go,javascript-typescript
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+
+      - name: Resolve environment for Go
+        uses: ./../action/resolve-environment
+        id: resolve-environment-go
+        with:
+          language: go
+
+      - name: Fail if Go configuration missing
+        if: (!fromJSON(steps.resolve-environment-go.outputs.environment).configuration.go)
+        run: exit 1
+
+      - name: Resolve environment for JavaScript/TypeScript
+        uses: ./../action/resolve-environment
+        id: resolve-environment-js
+        with:
+          language: javascript-typescript
+
+      - name: Fail if JavaScript/TypeScript configuration present
+        if: fromJSON(steps.resolve-environment-js.outputs.environment).configuration.javascript
+        run: exit 1
+    env:
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__ruby.yml

@@ -0,0 +1,82 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: PR Check - Ruby analysis
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs: {}
+  workflow_call:
+    inputs: {}
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: ruby-${{github.ref}}
+jobs:
+  ruby:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-26.04
+            version: linked
+          - os: macos-26
+            version: linked
+          - os: ubuntu-26.04
+            version: default
+          - os: macos-26
+            version: default
+          - os: ubuntu-26.04
+            version: nightly-latest
+          - os: macos-26
+            version: nightly-latest
+    name: Ruby analysis
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "true"
+      - uses: ./../action/init
+        with:
+          languages: ruby
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - uses: ./../action/analyze
+        id: analysis
+        with:
+          upload-database: false
+      - name: Check database
+        run: |
+          RUBY_DB="${{ fromJson(steps.analysis.outputs.db-locations).ruby }}"
+          if [[ ! -d "$RUBY_DB" ]]; then
+            echo "Did not create a database for Ruby."
+            exit 1
+          fi
+    env:
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__rust.yml

@@ -0,0 +1,80 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: PR Check - Rust analysis
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs: {}
+  workflow_call:
+    inputs: {}
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: rust-${{github.ref}}
+jobs:
+  rust:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-24.04
+            version: stable-v2.20.7
+          - os: ubuntu-26.04
+            version: stable-v2.22.1
+          - os: ubuntu-26.04
+            version: linked
+          - os: ubuntu-26.04
+            version: default
+          - os: ubuntu-26.04
+            version: nightly-latest
+    name: Rust analysis
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "true"
+      - uses: ./../action/init
+        with:
+          languages: rust
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - uses: ./../action/analyze
+        id: analysis
+        with:
+          upload-database: false
+      - name: Check database
+        run: |
+          RUST_DB="${{ fromJson(steps.analysis.outputs.db-locations).rust }}"
+          if [[ ! -d "$RUST_DB" ]]; then
+            echo "Did not create a database for Rust."
+            exit 1
+          fi
+    env:
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__split-workflow.yml

@@ -0,0 +1,133 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: PR Check - Split workflow
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs:
+      dotnet-version:
+        type: string
+        description: The version of .NET to install
+        required: false
+        default: 9.x
+      go-version:
+        type: string
+        description: The version of Go to install
+        required: false
+        default: ">=1.21.0"
+  workflow_call:
+    inputs:
+      dotnet-version:
+        type: string
+        description: The version of .NET to install
+        required: false
+        default: 9.x
+      go-version:
+        type: string
+        description: The version of Go to install
+        required: false
+        default: ">=1.21.0"
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: split-workflow-${{github.ref}}-${{inputs.dotnet-version}}-${{inputs.go-version}}
+jobs:
+  split-workflow:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-26.04
+            version: linked
+          - os: macos-26
+            version: linked
+          - os: ubuntu-26.04
+            version: default
+          - os: macos-26
+            version: default
+          - os: ubuntu-26.04
+            version: nightly-latest
+          - os: macos-26
+            version: nightly-latest
+    name: Split workflow
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Install .NET
+        uses: actions/setup-dotnet@a98b56852c35b8e3190ac28c8c2271da59106c68 # v6.0.0
+        with:
+          dotnet-version: ${{ inputs.dotnet-version || '9.x' }}
+      - name: Install Go
+        uses: actions/setup-go@b7ad1dad31e06c5925ef5d2fc7ad053ef454303e # v7.0.0
+        with:
+          go-version: ${{ inputs.go-version || '>=1.21.0' }}
+          cache: false
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "true"
+      - uses: ./../action/init
+        with:
+          config-file: ".github/codeql/codeql-config-packaging3.yml"
+          packs: +codeql-testing/codeql-pack1@1.0.0
+          languages: javascript
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - name: Build code
+        run: ./build.sh
+      - uses: ./../action/analyze
+        with:
+          skip-queries: true
+          output: "${{ runner.temp }}/results"
+          upload-database: false
+
+      - name: Assert No Results
+        run: |
+          if [ "$(ls -A $RUNNER_TEMP/results)" ]; then
+            echo "Expected results directory to be empty after skipping query execution!"
+            exit 1
+          fi
+      - uses: ./../action/analyze
+        with:
+          output: "${{ runner.temp }}/results"
+          upload-database: false
+      - name: Assert Results
+        run: |
+          cd "$RUNNER_TEMP/results"
+          # We should have 4 hits from these rules
+          EXPECTED_RULES="javascript/example/empty-or-one-block javascript/example/empty-or-one-block javascript/example/other-query-block javascript/example/two-block"
+
+          # use tr to replace newlines with spaces and xargs to trim leading and trailing whitespace
+          RULES="$(cat javascript.sarif | jq -r '.runs[0].results[].ruleId' | sort | tr "\n\r" " " | xargs)"
+          echo "Found matching rules '$RULES'"
+          if [ "$RULES" != "$EXPECTED_RULES" ]; then
+            echo "Did not match expected rules '$EXPECTED_RULES'."
+            exit 1
+          fi
+    env:
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__start-proxy.yml

@@ -0,0 +1,105 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: PR Check - Start proxy
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs: {}
+  workflow_call:
+    inputs: {}
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: start-proxy-${{github.ref}}
+jobs:
+  start-proxy:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-26.04
+            version: linked
+          - os: macos-26
+            version: linked
+          - os: windows-2025
+            version: linked
+    name: Start proxy
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "true"
+      - name: Setup proxy for registries
+        id: proxy
+        uses: ./../action/start-proxy
+        with:
+          language: java
+          registry_secrets: |
+            [
+              {
+                "type": "maven_repository",
+                "url": "https://repo.maven.apache.org/maven2/"
+              },
+              {
+                "type": "maven_repository",
+                "url": "https://repo1.maven.org/maven2"
+              }
+            ]
+
+      - name: Print proxy outputs
+        run: |
+          echo "${{ steps.proxy.outputs.proxy_host }}"
+          echo "${{ steps.proxy.outputs.proxy_port }}"
+          echo "${{ steps.proxy.outputs.proxy_urls }}"
+
+      - name: Fail if proxy outputs are not set
+        if: (!steps.proxy.outputs.proxy_host) || (!steps.proxy.outputs.proxy_port) || (!steps.proxy.outputs.proxy_ca_certificate) || (!steps.proxy.outputs.proxy_urls)
+        run: exit 1
+
+      - name: Fail if proxy_urls does not contain all registries
+        if: |
+          join(fromJSON(steps.proxy.outputs.proxy_urls)[*].type, ',') != 'maven_repository,maven_repository'
+          || !contains(steps.proxy.outputs.proxy_urls, 'https://repo.maven.apache.org/maven2/')
+          || !contains(steps.proxy.outputs.proxy_urls, 'https://repo1.maven.org/maven2')
+        run: exit 1
+
+      - uses: ./../action/init
+        env:
+          CODEQL_PROXY_HOST: ${{ steps.proxy.outputs.proxy_host }}
+          CODEQL_PROXY_PORT: ${{ steps.proxy.outputs.proxy_port }}
+          CODEQL_PROXY_CA_CERTIFICATE: ${{ steps.proxy.outputs.proxy_ca_certificate }}
+        with:
+          languages: java
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+          config-file: codeql-action@main:tests/multi-language-repo/.github/codeql/custom-queries.yml
+    env:
+      CODEQL_ACTION_PROXY_API_REQUESTS: "true"
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__submit-sarif-failure.yml

@@ -0,0 +1,84 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: PR Check - Submit SARIF after failure
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs: {}
+  workflow_call:
+    inputs: {}
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: submit-sarif-failure-${{github.ref}}
+jobs:
+  submit-sarif-failure:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-26.04
+            version: linked
+          - os: ubuntu-26.04
+            version: default
+          - os: ubuntu-26.04
+            version: nightly-latest
+    name: Submit SARIF after failure
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: write
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "true"
+      - uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - uses: ./init
+        with:
+          languages: javascript
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - name: Fail
+        # We want this job to pass if the Action correctly uploads the SARIF file for
+        # the failed run.
+        # Setting this step to continue on error means that it is marked as completing
+        # successfully, so will not fail the job.
+        continue-on-error: true
+        run: exit 1
+      - uses: ./analyze
+        # In a real workflow, this step wouldn't run. Since we used `continue-on-error`
+        # above, we manually disable it with an `if` condition. Having this step is required
+        # for the init post-action because it checks the workflow definition for e.g. the
+        # `category` input. Without this step, that part of the init post-action would fail.
+        if: false
+        with:
+          category: "/test-codeql-version:${{ matrix.version }}"
+    env:
+      CODEQL_ACTION_EXPECT_UPLOAD_FAILED_SARIF: true
+      CODEQL_ACTION_UPLOAD_FAILED_SARIF: true
+      CODEQL_ACTION_TEST_MODE: false
+      CODEQL_ACTION_TESTING_ENVIRONMENT: codeql-action-pr-checks

.github/workflows/__swift-autobuild.yml

@@ -0,0 +1,78 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: PR Check - Swift analysis using autobuild
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs: {}
+  workflow_call:
+    inputs: {}
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: swift-autobuild-${{github.ref}}
+jobs:
+  swift-autobuild:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: macos-26-xlarge
+            version: nightly-latest
+    name: Swift analysis using autobuild
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "true"
+      - uses: ./../action/init
+        id: init
+        with:
+          languages: swift
+          build-mode: autobuild
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - name: Check working directory
+        run: pwd
+      - uses: ./../action/autobuild
+        timeout-minutes: 30
+      - uses: ./../action/analyze
+        id: analysis
+        with:
+          upload-database: false
+      - name: Check database
+        run: |
+          SWIFT_DB="${{ fromJson(steps.analysis.outputs.db-locations).swift }}"
+          if [[ ! -d "$SWIFT_DB" ]]; then
+            echo "Did not create a database for Swift."
+            exit 1
+          fi
+    env:
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__swift-custom-build.yml

@@ -0,0 +1,111 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: PR Check - Swift analysis using a custom build command
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs:
+      dotnet-version:
+        type: string
+        description: The version of .NET to install
+        required: false
+        default: 9.x
+      go-version:
+        type: string
+        description: The version of Go to install
+        required: false
+        default: ">=1.21.0"
+  workflow_call:
+    inputs:
+      dotnet-version:
+        type: string
+        description: The version of .NET to install
+        required: false
+        default: 9.x
+      go-version:
+        type: string
+        description: The version of Go to install
+        required: false
+        default: ">=1.21.0"
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: swift-custom-build-${{github.ref}}-${{inputs.dotnet-version}}-${{inputs.go-version}}
+jobs:
+  swift-custom-build:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: macos-26-xlarge
+            version: linked
+          - os: macos-26-xlarge
+            version: default
+          - os: macos-26-xlarge
+            version: nightly-latest
+    name: Swift analysis using a custom build command
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Install .NET
+        uses: actions/setup-dotnet@a98b56852c35b8e3190ac28c8c2271da59106c68 # v6.0.0
+        with:
+          dotnet-version: ${{ inputs.dotnet-version || '9.x' }}
+      - name: Install Go
+        uses: actions/setup-go@b7ad1dad31e06c5925ef5d2fc7ad053ef454303e # v7.0.0
+        with:
+          go-version: ${{ inputs.go-version || '>=1.21.0' }}
+          cache: false
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "true"
+      - uses: ./../action/init
+        id: init
+        with:
+          languages: swift
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - name: Check working directory
+        run: pwd
+      - name: Build code
+        run: ./build.sh
+      - uses: ./../action/analyze
+        id: analysis
+        with:
+          upload-database: false
+      - name: Check database
+        run: |
+          SWIFT_DB="${{ fromJson(steps.analysis.outputs.db-locations).swift }}"
+          if [[ ! -d "$SWIFT_DB" ]]; then
+            echo "Did not create a database for Swift."
+            exit 1
+          fi
+    env:
+      DOTNET_GENERATE_ASPNET_CERTIFICATE: "false"
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__unset-environment.yml

@@ -0,0 +1,138 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: PR Check - Test unsetting environment variables
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs:
+      dotnet-version:
+        type: string
+        description: The version of .NET to install
+        required: false
+        default: 9.x
+      go-version:
+        type: string
+        description: The version of Go to install
+        required: false
+        default: ">=1.21.0"
+  workflow_call:
+    inputs:
+      dotnet-version:
+        type: string
+        description: The version of .NET to install
+        required: false
+        default: 9.x
+      go-version:
+        type: string
+        description: The version of Go to install
+        required: false
+        default: ">=1.21.0"
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: unset-environment-${{github.ref}}-${{inputs.dotnet-version}}-${{inputs.go-version}}
+jobs:
+  unset-environment:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-26.04
+            version: linked
+          - os: ubuntu-26.04
+            version: nightly-latest
+    name: Test unsetting environment variables
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Install .NET
+        uses: actions/setup-dotnet@a98b56852c35b8e3190ac28c8c2271da59106c68 # v6.0.0
+        with:
+          dotnet-version: ${{ inputs.dotnet-version || '9.x' }}
+      - name: Install Go
+        uses: actions/setup-go@b7ad1dad31e06c5925ef5d2fc7ad053ef454303e # v7.0.0
+        with:
+          go-version: ${{ inputs.go-version || '>=1.21.0' }}
+          cache: false
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "true"
+      - uses: ./../action/init
+        id: init
+        with:
+          db-location: ${{ runner.temp }}/customDbLocation
+          # Swift is not supported on Ubuntu so we manually exclude it from the list here
+          languages: cpp,csharp,go,java,javascript,python,ruby
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - name: Build code
+        run: env -i PATH="$PATH" HOME="$HOME" ./build.sh
+      - uses: ./../action/analyze
+        id: analysis
+        with:
+          upload-database: false
+      - run: |
+          CPP_DB="${{ fromJson(steps.analysis.outputs.db-locations).cpp }}"
+          if [[ ! -d "$CPP_DB" ]] || [[ ! "$CPP_DB" == "${RUNNER_TEMP}/customDbLocation/cpp" ]]; then
+            echo "::error::Did not create a database for CPP, or created it in the wrong location." \
+              "Expected location was '${RUNNER_TEMP}/customDbLocation/cpp' but actual was '${CPP_DB}'"
+            exit 1
+          fi
+          CSHARP_DB="${{ fromJson(steps.analysis.outputs.db-locations).csharp }}"
+          if [[ ! -d "$CSHARP_DB" ]] || [[ ! "$CSHARP_DB" == "${RUNNER_TEMP}/customDbLocation/csharp" ]]; then
+            echo "::error::Did not create a database for C Sharp, or created it in the wrong location." \
+              "Expected location was '${RUNNER_TEMP}/customDbLocation/csharp' but actual was '${CSHARP_DB}'"
+            exit 1
+          fi
+          GO_DB="${{ fromJson(steps.analysis.outputs.db-locations).go }}"
+          if [[ ! -d "$GO_DB" ]] || [[ ! "$GO_DB" == "${RUNNER_TEMP}/customDbLocation/go" ]]; then
+            echo "::error::Did not create a database for Go, or created it in the wrong location." \
+              "Expected location was '${RUNNER_TEMP}/customDbLocation/go' but actual was '${GO_DB}'"
+            exit 1
+          fi
+          JAVA_DB="${{ fromJson(steps.analysis.outputs.db-locations).java }}"
+          if [[ ! -d "$JAVA_DB" ]] || [[ ! "$JAVA_DB" == "${RUNNER_TEMP}/customDbLocation/java" ]]; then
+            echo "::error::Did not create a database for Java, or created it in the wrong location." \
+              "Expected location was '${RUNNER_TEMP}/customDbLocation/java' but actual was '${JAVA_DB}'"
+            exit 1
+          fi
+          JAVASCRIPT_DB="${{ fromJson(steps.analysis.outputs.db-locations).javascript }}"
+          if [[ ! -d "$JAVASCRIPT_DB" ]] || [[ ! "$JAVASCRIPT_DB" == "${RUNNER_TEMP}/customDbLocation/javascript" ]]; then
+            echo "::error::Did not create a database for Javascript, or created it in the wrong location." \
+              "Expected location was '${RUNNER_TEMP}/customDbLocation/javascript' but actual was '${JAVASCRIPT_DB}'"
+            exit 1
+          fi
+          PYTHON_DB="${{ fromJson(steps.analysis.outputs.db-locations).python }}"
+          if [[ ! -d "$PYTHON_DB" ]] || [[ ! "$PYTHON_DB" == "${RUNNER_TEMP}/customDbLocation/python" ]]; then
+            echo "::error::Did not create a database for Python, or created it in the wrong location." \
+              "Expected location was '${RUNNER_TEMP}/customDbLocation/python' but actual was '${PYTHON_DB}'"
+            exit 1
+          fi
+    env:
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__unsupported-macos.yml

@@ -0,0 +1,135 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: PR Check - Unsupported macOS
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs: {}
+  workflow_call:
+    inputs: {}
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: unsupported-macos-${{github.ref}}
+jobs:
+  unsupported-macos:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: xcode-27
+            version: linked
+          - os: xcode-27
+            version: nightly-latest
+    name: Unsupported macOS
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Install Node.js
+        uses: actions/setup-node@949feb2413d6458794dcd2491c4babbbce0c15c1 # v7.1.0
+        with:
+          node-version: 20.x
+          cache: npm
+      - name: Install newer npm
+        run: npm install -g npm@11.19.1
+      - name: Install dependencies
+        run: npm ci
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "true"
+      - name: Check xcode_select_link
+        run: |
+          readlink /private/var/db/xcode_select_link
+          file -h /private/var/db/xcode_select_link
+
+      - uses: ./../action/init
+        id: init
+        continue-on-error: true
+        env:
+          CODEQL_ACTION_CHECK_UNSUPPORTED_TRACED_ANALYSIS: true
+          CODEQL_ACTION_ABORT_UNSUPPORTED_TRACED_ANALYSIS: true
+        with:
+          languages: swift
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+
+      - name: Analyze
+        # We could run `analyze` here from `./../analyze`, but `getAnalyzeActionName` in `workflow.ts`
+        # can't cope with that unless we introduce a different testing environment. Since this step
+        # would just fail on `xcode-27` anyway, we just skip it instead.
+        if: false
+        uses: ./analyze
+        with:
+          category: "/test-codeql-version:${{ matrix.version }}"
+    env:
+      CODEQL_ACTION_SKIP_GENERATE_FAILED_SARIF: false
+      CODEQL_ACTION_SKIP_SARIF_UPLOAD: true
+      CODEQL_ACTION_TESTING_ENVIRONMENT: codeql-action-pr-checks
+      CODEQL_ACTION_TEST_MODE: true
+  unsupported-macos-sarif-checks:
+    if: github.triggering_actor != 'dependabot[bot]'
+    needs:
+      - unsupported-macos
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 5
+    runs-on: ubuntu-26.04
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Install Node.js
+        uses: actions/setup-node@949feb2413d6458794dcd2491c4babbbce0c15c1 # v7.1.0
+        with:
+          node-version: 20.x
+          cache: npm
+      - name: Install newer npm
+        run: npm install -g npm@11.19.1
+      - name: Install dependencies
+        run: npm ci
+      - name: Download workflow artifact
+        uses: actions/download-artifact@9000827ccba6bdab643e8b6fd33ac0654aef8333 # v8.0.2
+        with:
+          pattern: test-mode-sarif-*
+          path: sarif
+
+      - name: List artifact contents
+        run: ls -laR ./sarif
+
+      - name: Check diagnostics appear in SARIF
+        env:
+          SARIF_PATH: "./sarif/"
+          DIAGNOSTIC_ID: "codeql-action/unsupported-traced-analysis-macos"
+          DIAGNOSTIC_NAME: "Traced analysis is not supported on this version of macOS"
+          EXPECTED_LOCATIONS: "0"
+          EXPECTED_MESSAGE: |
+            Traced analysis is not supported on macOS 27 or above.
+        run: npx tsx ./pr-checks/check-diagnostics.ts
+    env:
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__upload-ref-sha-input.yml

@@ -0,0 +1,103 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: "PR Check - Upload-sarif: 'ref' and 'sha' from inputs"
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs:
+      dotnet-version:
+        type: string
+        description: The version of .NET to install
+        required: false
+        default: 9.x
+      go-version:
+        type: string
+        description: The version of Go to install
+        required: false
+        default: ">=1.21.0"
+  workflow_call:
+    inputs:
+      dotnet-version:
+        type: string
+        description: The version of .NET to install
+        required: false
+        default: 9.x
+      go-version:
+        type: string
+        description: The version of Go to install
+        required: false
+        default: ">=1.21.0"
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: upload-ref-sha-input-${{github.ref}}-${{inputs.dotnet-version}}-${{inputs.go-version}}
+jobs:
+  upload-ref-sha-input:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-26.04
+            version: default
+    name: "Upload-sarif: 'ref' and 'sha' from inputs"
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Install .NET
+        uses: actions/setup-dotnet@a98b56852c35b8e3190ac28c8c2271da59106c68 # v6.0.0
+        with:
+          dotnet-version: ${{ inputs.dotnet-version || '9.x' }}
+      - name: Install Go
+        uses: actions/setup-go@b7ad1dad31e06c5925ef5d2fc7ad053ef454303e # v7.0.0
+        with:
+          go-version: ${{ inputs.go-version || '>=1.21.0' }}
+          cache: false
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "true"
+      - uses: ./../action/init
+        with:
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+          languages: cpp,csharp,java,javascript,python
+          config-file: ${{ github.repository }}/tests/multi-language-repo/.github/codeql/custom-queries.yml@${{ github.sha }}
+      - name: Build code
+        run: ./build.sh
+      # Generate some SARIF we can upload with the upload-sarif step
+      - uses: ./../action/analyze
+        with:
+          ref: "refs/heads/main"
+          sha: "5e235361806c361d4d3f8859e3c897658025a9a2"
+          upload: never
+      - uses: ./../action/upload-sarif
+        with:
+          ref: "refs/heads/main"
+          sha: "5e235361806c361d4d3f8859e3c897658025a9a2"
+    env:
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__upload-sarif.yml

@@ -0,0 +1,168 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: PR Check - Test different uses of `upload-sarif`
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs:
+      dotnet-version:
+        type: string
+        description: The version of .NET to install
+        required: false
+        default: 9.x
+      go-version:
+        type: string
+        description: The version of Go to install
+        required: false
+        default: ">=1.21.0"
+  workflow_call:
+    inputs:
+      dotnet-version:
+        type: string
+        description: The version of .NET to install
+        required: false
+        default: 9.x
+      go-version:
+        type: string
+        description: The version of Go to install
+        required: false
+        default: ">=1.21.0"
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: upload-sarif-${{github.ref}}-${{inputs.dotnet-version}}-${{inputs.go-version}}
+jobs:
+  upload-sarif:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-26.04
+            version: default
+            analysis-kinds: code-scanning
+          - os: ubuntu-26.04
+            version: default
+            analysis-kinds: code-quality
+          - os: ubuntu-26.04
+            version: default
+            analysis-kinds: code-scanning,code-quality
+    name: Test different uses of `upload-sarif`
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Install .NET
+        uses: actions/setup-dotnet@a98b56852c35b8e3190ac28c8c2271da59106c68 # v6.0.0
+        with:
+          dotnet-version: ${{ inputs.dotnet-version || '9.x' }}
+      - name: Install Go
+        uses: actions/setup-go@b7ad1dad31e06c5925ef5d2fc7ad053ef454303e # v7.0.0
+        with:
+          go-version: ${{ inputs.go-version || '>=1.21.0' }}
+          cache: false
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "true"
+      - uses: ./../action/init
+        with:
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+          languages: csharp,java,javascript,python
+          analysis-kinds: ${{ matrix.analysis-kinds }}
+      - name: Build code
+        run: ./build.sh
+      # Generate some SARIF we can upload with the upload-sarif step
+      - uses: ./../action/analyze
+        with:
+          ref: "refs/heads/main"
+          sha: "5e235361806c361d4d3f8859e3c897658025a9a2"
+          upload: never
+          output: ${{ runner.temp }}/results
+
+      - name: |
+          Upload all SARIF files for `analysis-kinds: ${{ matrix.analysis-kinds }}`
+        uses: ./../action/upload-sarif
+        id: upload-sarif
+        with:
+          ref: "refs/heads/main"
+          sha: "5e235361806c361d4d3f8859e3c897658025a9a2"
+          sarif_file: ${{ runner.temp }}/results
+          category: |
+            ${{ github.workflow }}:upload-sarif/analysis-kinds:${{ matrix.analysis-kinds }}/os:${{ matrix.os }}/version:${{ matrix.version }}/test:all-files/
+      - name: "Fail for missing output from `upload-sarif` step for `code-scanning`"
+        if: contains(matrix.analysis-kinds, 'code-scanning') && !(fromJSON(steps.upload-sarif.outputs.sarif-ids).code-scanning)
+        run: exit 1
+      - name: "Fail for missing output from `upload-sarif` step for `code-quality`"
+        if: contains(matrix.analysis-kinds, 'code-quality') && !(fromJSON(steps.upload-sarif.outputs.sarif-ids).code-quality)
+        run: exit 1
+
+      - name: Upload single SARIF file for Code Scanning
+        uses: ./../action/upload-sarif
+        id: upload-single-sarif-code-scanning
+        if: contains(matrix.analysis-kinds, 'code-scanning')
+        with:
+          ref: "refs/heads/main"
+          sha: "5e235361806c361d4d3f8859e3c897658025a9a2"
+          sarif_file: ${{ runner.temp }}/results/javascript.sarif
+          category: |
+            ${{ github.workflow }}:upload-sarif/analysis-kinds:${{ matrix.analysis-kinds }}/os:${{ matrix.os }}/version:${{ matrix.version }}/test:single-code-scanning/
+      - name: "Fail for missing output from `upload-single-sarif-code-scanning` step"
+        if: contains(matrix.analysis-kinds, 'code-scanning') && !(fromJSON(steps.upload-single-sarif-code-scanning.outputs.sarif-ids).code-scanning)
+        run: exit 1
+      - name: Upload single SARIF file for Code Quality
+        uses: ./../action/upload-sarif
+        id: upload-single-sarif-code-quality
+        if: contains(matrix.analysis-kinds, 'code-quality')
+        with:
+          ref: "refs/heads/main"
+          sha: "5e235361806c361d4d3f8859e3c897658025a9a2"
+          sarif_file: ${{ runner.temp }}/results/javascript.quality.sarif
+          category: |
+            ${{ github.workflow }}:upload-sarif/analysis-kinds:${{ matrix.analysis-kinds }}/os:${{ matrix.os }}/version:${{ matrix.version }}/test:single-code-quality/
+      - name: "Fail for missing output from `upload-single-sarif-code-quality` step"
+        if: contains(matrix.analysis-kinds, 'code-quality') && !(fromJSON(steps.upload-single-sarif-code-quality.outputs.sarif-ids).code-quality)
+        run: exit 1
+
+      - name: Change SARIF file extension
+        if: contains(matrix.analysis-kinds, 'code-scanning')
+        run: mv ${{ runner.temp }}/results/javascript.sarif ${{ runner.temp }}/results/javascript.sarif.json
+      - name: Upload single non-`.sarif` file
+        uses: ./../action/upload-sarif
+        id: upload-single-non-sarif
+        if: contains(matrix.analysis-kinds, 'code-scanning')
+        with:
+          ref: "refs/heads/main"
+          sha: "5e235361806c361d4d3f8859e3c897658025a9a2"
+          sarif_file: ${{ runner.temp }}/results/javascript.sarif.json
+          category: |
+            ${{ github.workflow }}:upload-sarif/analysis-kinds:${{ matrix.analysis-kinds }}/os:${{ matrix.os }}/version:${{ matrix.version }}/test:non-sarif/
+      - name: "Fail for missing output from `upload-single-non-sarif` step"
+        if: contains(matrix.analysis-kinds, 'code-scanning') && !(fromJSON(steps.upload-single-non-sarif.outputs.sarif-ids).code-scanning)
+        run: exit 1
+    env:
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/__with-checkout-path.yml

@@ -0,0 +1,146 @@
+# Warning: This file is generated automatically, and should not be modified.
+# Instead, please modify the template in the pr-checks directory and run:
+#     pr-checks/sync.sh
+# to regenerate this file.
+
+name: PR Check - Use a custom `checkout_path`
+env:
+  GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+  GO111MODULE: auto
+on:
+  push:
+    branches:
+      - main
+      - releases/v*
+  pull_request: {}
+  merge_group:
+    types:
+      - checks_requested
+  schedule:
+    - cron: "0 5 * * *"
+  workflow_dispatch:
+    inputs:
+      dotnet-version:
+        type: string
+        description: The version of .NET to install
+        required: false
+        default: 9.x
+      go-version:
+        type: string
+        description: The version of Go to install
+        required: false
+        default: ">=1.21.0"
+  workflow_call:
+    inputs:
+      dotnet-version:
+        type: string
+        description: The version of .NET to install
+        required: false
+        default: 9.x
+      go-version:
+        type: string
+        description: The version of Go to install
+        required: false
+        default: ">=1.21.0"
+defaults:
+  run:
+    shell: bash
+concurrency:
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
+  group: with-checkout-path-${{github.ref}}-${{inputs.dotnet-version}}-${{inputs.go-version}}
+jobs:
+  with-checkout-path:
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - os: ubuntu-26.04
+            version: linked
+    name: Use a custom `checkout_path`
+    if: github.triggering_actor != 'dependabot[bot]'
+    permissions:
+      contents: read
+      security-events: read
+    timeout-minutes: 45
+    runs-on: ${{ matrix.os }}
+    steps:
+      # This ensures we don't accidentally use the original checkout for any part of the test.
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Install .NET
+        uses: actions/setup-dotnet@a98b56852c35b8e3190ac28c8c2271da59106c68 # v6.0.0
+        with:
+          dotnet-version: ${{ inputs.dotnet-version || '9.x' }}
+      - name: Install Go
+        uses: actions/setup-go@b7ad1dad31e06c5925ef5d2fc7ad053ef454303e # v7.0.0
+        with:
+          go-version: ${{ inputs.go-version || '>=1.21.0' }}
+          cache: false
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: "false"
+          setup-kotlin: "true"
+      - name: Delete original checkout
+        run: |
+          # delete the original checkout so we don't accidentally use it.
+          # Actions does not support deleting the current working directory, so we
+          # delete the contents of the directory instead.
+          rm -rf ./* .github .git
+      # Check out the actions repo again, but at a different location.
+      # choose an arbitrary SHA so that we can later test that the commit_oid is not from main
+      - uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+        with:
+          ref: 474bbf07f9247ffe1856c6a0f94aeeb10e7afee6
+          path: x/y/z/some-path
+
+      - uses: ./../action/init
+        with:
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+          # it's enough to test one compiled language and one interpreted language
+          languages: csharp,javascript
+          source-root: x/y/z/some-path/tests/multi-language-repo
+
+      - name: Build code
+        working-directory: x/y/z/some-path/tests/multi-language-repo
+        run: |
+          ./build.sh
+
+      - uses: ./../action/analyze
+        with:
+          checkout_path: x/y/z/some-path/tests/multi-language-repo
+          ref: v1.1.0
+          sha: 474bbf07f9247ffe1856c6a0f94aeeb10e7afee6
+
+      - name: Verify SARIF after upload
+        run: |
+          PAYLOAD_FILE="$RUNNER_TEMP/payload-code-scanning.json"
+          EXPECTED_COMMIT_OID="474bbf07f9247ffe1856c6a0f94aeeb10e7afee6"
+          EXPECTED_REF="v1.1.0"
+          EXPECTED_CHECKOUT_URI_SUFFIX="/x/y/z/some-path/tests/multi-language-repo"
+
+          ACTUAL_COMMIT_OID="$(cat "$PAYLOAD_FILE" | jq -r .commit_oid)"
+          ACTUAL_REF="$(cat "$PAYLOAD_FILE" | jq -r .ref)"
+          ACTUAL_CHECKOUT_URI="$(cat "$PAYLOAD_FILE" | jq -r .checkout_uri)"
+
+          if [[ "$EXPECTED_COMMIT_OID" != "$ACTUAL_COMMIT_OID" ]]; then
+            echo "::error Invalid commit oid. Expected: $EXPECTED_COMMIT_OID Actual: $ACTUAL_COMMIT_OID"
+            echo "$PAYLOAD_FILE"
+            exit 1
+          fi
+
+          if [[ "$EXPECTED_REF" != "$ACTUAL_REF" ]]; then
+            echo "::error Invalid ref. Expected: '$EXPECTED_REF' Actual: '$ACTUAL_REF'"
+            echo "$PAYLOAD_FILE"
+            exit 1
+          fi
+
+          if [[ "$ACTUAL_CHECKOUT_URI" != *$EXPECTED_CHECKOUT_URI_SUFFIX ]]; then
+            echo "::error Invalid checkout URI suffix. Expected suffix: $EXPECTED_CHECKOUT_URI_SUFFIX Actual uri: $ACTUAL_CHECKOUT_URI"
+            echo "$PAYLOAD_FILE"
+            exit 1
+          fi
+    env:
+      CODEQL_ACTION_TEST_MODE: true

.github/workflows/codeql.yml

@@ -8,7 +8,7 @@ on:
     types: [checks_requested]
   schedule:
     # Weekly on Sunday.
-    - cron: '30 1 * * 0'
+    - cron: "30 1 * * 0"
   workflow_dispatch:
 
 defaults:
@@ -22,7 +22,7 @@ jobs:
   # Identify the CodeQL tool versions to use in the analysis job.
   check-codeql-versions:
     if: github.triggering_actor != 'dependabot[bot]'
-    runs-on: ubuntu-latest
+    runs-on: ubuntu-26.04
     outputs:
       versions: ${{ steps.compare.outputs.versions }}
 
@@ -32,41 +32,41 @@ jobs:
       security-events: read
 
     steps:
-    - uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-    - name: Set up default CodeQL bundle
-      id: setup-default
-      uses: ./setup-codeql
-    - name: Set up linked CodeQL bundle
-      id: setup-linked
-      uses: ./setup-codeql
-      with:
-        tools: linked
-    - name: Compare default and linked CodeQL bundle versions
-      id: compare
-      env:
-        CODEQL_DEFAULT: ${{ steps.setup-default.outputs.codeql-path }}
-        CODEQL_LINKED: ${{ steps.setup-linked.outputs.codeql-path }}
-      run: |
-        CODEQL_VERSION_DEFAULT="$("$CODEQL_DEFAULT" version --format terse)"
-        CODEQL_VERSION_LINKED="$("$CODEQL_LINKED" version --format terse)"
-        echo "Default CodeQL bundle version is $CODEQL_VERSION_DEFAULT"
-        echo "Linked CodeQL bundle version is $CODEQL_VERSION_LINKED"
+      - uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Set up default CodeQL bundle
+        id: setup-default
+        uses: ./setup-codeql
+      - name: Set up linked CodeQL bundle
+        id: setup-linked
+        uses: ./setup-codeql
+        with:
+          tools: linked
+      - name: Compare default and linked CodeQL bundle versions
+        id: compare
+        env:
+          CODEQL_DEFAULT: ${{ steps.setup-default.outputs.codeql-path }}
+          CODEQL_LINKED: ${{ steps.setup-linked.outputs.codeql-path }}
+        run: |
+          CODEQL_VERSION_DEFAULT="$("$CODEQL_DEFAULT" version --format terse)"
+          CODEQL_VERSION_LINKED="$("$CODEQL_LINKED" version --format terse)"
+          echo "Default CodeQL bundle version is $CODEQL_VERSION_DEFAULT"
+          echo "Linked CodeQL bundle version is $CODEQL_VERSION_LINKED"
 
-        # If we're running on a pull request, run with both bundles, even if `tools: linked` would
-        # be the same as `tools: null`. This allows us to make the job for each of the bundles a
-        # required status check.
-        #
-        # If we're running on push or schedule, then we can skip running with `tools: linked` when it would be
-        # the same as running with `tools: null`.
-        if [[ "$GITHUB_EVENT_NAME" != "pull_request" && "$GITHUB_EVENT_NAME" != "merge_group" && "$CODEQL_VERSION_DEFAULT" == "$CODEQL_VERSION_LINKED" ]]; then
-          VERSIONS_JSON='[null]'
-        else
-          VERSIONS_JSON='[null, "linked"]'
-        fi
+          # If we're running on a pull request, run with both bundles, even if `tools: linked` would
+          # be the same as `tools: null`. This allows us to make the job for each of the bundles a
+          # required status check.
+          #
+          # If we're running on push or schedule, then we can skip running with `tools: linked` when it would be
+          # the same as running with `tools: null`.
+          if [[ "$GITHUB_EVENT_NAME" != "pull_request" && "$GITHUB_EVENT_NAME" != "merge_group" && "$CODEQL_VERSION_DEFAULT" == "$CODEQL_VERSION_LINKED" ]]; then
+            VERSIONS_JSON='[null]'
+          else
+            VERSIONS_JSON='[null, "linked"]'
+          fi
 
-        # Output a JSON-encoded list with the distinct versions to test against.
-        echo "Suggested matrix config for analysis job: $VERSIONS_JSON"
-        echo "versions=${VERSIONS_JSON}" >> $GITHUB_OUTPUT
+          # Output a JSON-encoded list with the distinct versions to test against.
+          echo "Suggested matrix config for analysis job: $VERSIONS_JSON"
+          echo "versions=${VERSIONS_JSON}" >> $GITHUB_OUTPUT
 
   analyze-javascript:
     if: github.triggering_actor != 'dependabot[bot]'
@@ -74,7 +74,13 @@ jobs:
     strategy:
       fail-fast: false
       matrix:
-        os: [ubuntu-22.04,ubuntu-24.04,windows-2022,windows-2025,macos-14-xlarge,macos-15-xlarge]
+        os:
+          - ubuntu-22.04
+          - ubuntu-24.04
+          - windows-2022
+          - windows-2025
+          - macos-14-xlarge
+          - macos-15-xlarge
         tools: ${{ fromJson(needs.check-codeql-versions.outputs.versions) }}
     runs-on: ${{ matrix.os }}
 
@@ -83,30 +89,30 @@ jobs:
       security-events: write
 
     steps:
-    - name: Checkout
-      uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-    - name: Initialize CodeQL
-      uses: ./init
-      id: init
-      with:
-        languages: javascript
-        config-file: ./.github/codeql/codeql-config-javascript.yml
-        tools: ${{ matrix.tools }}
-    # confirm steps.init.outputs.codeql-path points to the codeql binary
-    - name: Print CodeQL Version
-      run: >
-        "$CODEQL" version --format=json
-      env:
-        CODEQL: ${{steps.init.outputs.codeql-path}}
-    - name: Perform CodeQL Analysis
-      uses: ./analyze
-      with:
-        category: "/language:javascript"
-        upload: ${{ (matrix.os == 'ubuntu-24.04' && !matrix.tools && github.event_name != 'merge_group' && 'always' ) || 'never' }}
+      - name: Checkout
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Initialize CodeQL
+        uses: ./init
+        id: init
+        with:
+          languages: javascript
+          config-file: ./.github/codeql/codeql-config-javascript.yml
+          tools: ${{ matrix.tools }}
+      # confirm steps.init.outputs.codeql-path points to the codeql binary
+      - name: Print CodeQL Version
+        run: >
+          "$CODEQL" version --format=json
+        env:
+          CODEQL: ${{steps.init.outputs.codeql-path}}
+      - name: Perform CodeQL Analysis
+        uses: ./analyze
+        with:
+          category: "/language:javascript"
+          upload: ${{ (matrix.os == 'ubuntu-24.04' && !matrix.tools && github.event_name != 'merge_group' && 'always' ) || 'never' }}
 
   analyze-other:
     if: github.triggering_actor != 'dependabot[bot]'
-    runs-on: ubuntu-latest
+    runs-on: ubuntu-26.04
 
     strategy:
       fail-fast: false
@@ -119,21 +125,21 @@ jobs:
       security-events: write
 
     steps:
-    - name: Checkout
-      uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-    - name: Initialize CodeQL
-      uses: ./init
-      with:
-        languages: ${{ matrix.language }}
-        build-mode: none
-        config: >
-          paths-ignore:
-            - lib
-            - tests
-          queries:
-            - uses: security-and-quality
-    - name: Perform CodeQL Analysis
-      uses: ./analyze
-      with:
-        category: "/language:${{ matrix.language }}"
-        upload: ${{ (github.event_name != 'merge_group' && 'always') || 'never' }}
+      - name: Checkout
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Initialize CodeQL
+        uses: ./init
+        with:
+          languages: ${{ matrix.language }}
+          build-mode: none
+          config: >
+            paths-ignore:
+              - lib
+              - tests
+            queries:
+              - uses: security-and-quality
+      - name: Perform CodeQL Analysis
+        uses: ./analyze
+        with:
+          category: "/language:${{ matrix.language }}"
+          upload: ${{ (github.event_name != 'merge_group' && 'always') || 'never' }}

.github/workflows/codescanning-config-cli.yml

@@ -10,13 +10,13 @@ env:
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
   merge_group:
     types: [checks_requested]
   schedule:
-    - cron: '0 5 * * *'
+    - cron: "0 5 * * *"
   workflow_dispatch:
 
 concurrency:
@@ -41,187 +41,187 @@ jobs:
       fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: linked
-        - os: ubuntu-latest
-          version: default
-        - os: ubuntu-latest
-          version: nightly-latest
+          - os: ubuntu-26.04
+            version: linked
+          - os: ubuntu-26.04
+            version: default
+          - os: ubuntu-26.04
+            version: nightly-latest
 
     # Code-Scanning config not created because environment variable is not set
     name: Code Scanning Configuration tests
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Check out repository
-      uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
 
-    - name: Set up Node.js
-      uses: actions/setup-node@820762786026740c76f36085b0efc47a31fe5020 # v7.0.0
-      with:
-        node-version: 24
-        cache: 'npm'
+      - name: Set up Node.js
+        uses: actions/setup-node@949feb2413d6458794dcd2491c4babbbce0c15c1 # v7.1.0
+        with:
+          node-version: 24
+          cache: "npm"
 
-    - name: Install dependencies
-      run: npm ci
+      - name: Install dependencies
+        run: npm ci
 
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
 
-    - name: Empty file
-      uses: ./../action/.github/actions/check-codescanning-config
-      with:
-        expected-config-file-contents: "{}"
-        # Request multiple languages so later checks can reuse the combined bundle.
-        languages: javascript,python
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - name: Empty file
+        uses: ./../action/.github/actions/check-codescanning-config
+        with:
+          expected-config-file-contents: "{}"
+          # Request multiple languages so later checks can reuse the combined bundle.
+          languages: javascript,python
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
 
-    - name: Packs from input
-      if: success() || failure()
-      uses: ./../action/.github/actions/check-codescanning-config
-      with:
-        expected-config-file-contents: |
-          {
-            "packs": ["codeql-testing/codeql-pack1@1.0.0", "codeql-testing/codeql-pack2" ]
-          }
-        languages: javascript
-        packs: codeql-testing/codeql-pack1@1.0.0, codeql-testing/codeql-pack2
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-
-    - name: Packs from input with +
-      if: success() || failure()
-      uses: ./../action/.github/actions/check-codescanning-config
-      with:
-        expected-config-file-contents: |
-          {
-            "packs": ["codeql-testing/codeql-pack1@1.0.0", "codeql-testing/codeql-pack2" ]
-          }
-        languages: javascript
-        packs: + codeql-testing/codeql-pack1@1.0.0, codeql-testing/codeql-pack2
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-
-    - name: Queries from input
-      if: success() || failure()
-      uses: ./../action/.github/actions/check-codescanning-config
-      with:
-        expected-config-file-contents: |
-          {
-            "queries": [{ "uses": "./codeql-qlpacks/complex-javascript-qlpack/show_ifs.ql" }]
-          }
-        languages: javascript
-        queries: ./codeql-qlpacks/complex-javascript-qlpack/show_ifs.ql
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-
-    - name: Queries from input with +
-      if: success() || failure()
-      uses: ./../action/.github/actions/check-codescanning-config
-      with:
-        expected-config-file-contents: |
-          {
-            "queries": [{ "uses": "./codeql-qlpacks/complex-javascript-qlpack/show_ifs.ql" }]
-          }
-        languages: javascript
-        queries: + ./codeql-qlpacks/complex-javascript-qlpack/show_ifs.ql
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-
-    - name: Queries and packs from input with +
-      if: success() || failure()
-      uses: ./../action/.github/actions/check-codescanning-config
-      with:
-        expected-config-file-contents: |
-          {
-            "queries": [{ "uses": "./codeql-qlpacks/complex-javascript-qlpack/show_ifs.ql" }],
-            "packs": ["codeql-testing/codeql-pack1@1.0.0", "codeql-testing/codeql-pack2" ]
-          }
-        languages: javascript
-        queries: + ./codeql-qlpacks/complex-javascript-qlpack/show_ifs.ql
-        packs: + codeql-testing/codeql-pack1@1.0.0, codeql-testing/codeql-pack2
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-
-    - name: Queries and packs from config
-      if: success() || failure()
-      uses: ./../action/.github/actions/check-codescanning-config
-      with:
-        expected-config-file-contents: |
-          {
-            "queries": [{ "uses": "./codeql-qlpacks/complex-javascript-qlpack/foo2/show_ifs.ql" }],
-            "packs": {
-              "javascript": ["codeql-testing/codeql-pack1@1.0.0", "codeql-testing/codeql-pack2" ]
+      - name: Packs from input
+        if: success() || failure()
+        uses: ./../action/.github/actions/check-codescanning-config
+        with:
+          expected-config-file-contents: |
+            {
+              "packs": ["codeql-testing/codeql-pack1@1.0.0", "codeql-testing/codeql-pack2" ]
             }
-          }
-        languages: javascript
-        config-file-test: .github/codeql/queries-and-packs-config.yml
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
+          languages: javascript
+          packs: codeql-testing/codeql-pack1@1.0.0, codeql-testing/codeql-pack2
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
 
-    - name: Queries and packs from config overriden by input
-      if: success() || failure()
-      uses: ./../action/.github/actions/check-codescanning-config
-      with:
-        expected-config-file-contents: |
-          {
-            "queries": [{ "uses": "./codeql-qlpacks/complex-javascript-qlpack/show_ifs.ql" }],
-            "packs": ["codeql/javascript-queries"]
-          }
-        languages: javascript
-        queries: ./codeql-qlpacks/complex-javascript-qlpack/show_ifs.ql
-        packs: codeql/javascript-queries
-        config-file-test: .github/codeql/queries-and-packs-config.yml
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - name: Packs from input with +
+        if: success() || failure()
+        uses: ./../action/.github/actions/check-codescanning-config
+        with:
+          expected-config-file-contents: |
+            {
+              "packs": ["codeql-testing/codeql-pack1@1.0.0", "codeql-testing/codeql-pack2" ]
+            }
+          languages: javascript
+          packs: + codeql-testing/codeql-pack1@1.0.0, codeql-testing/codeql-pack2
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
 
-    - name: Queries and packs from config merging with input
-      if: success() || failure()
-      uses: ./../action/.github/actions/check-codescanning-config
-      with:
-        expected-config-file-contents: |
-          {
-            "packs": {
-              "javascript": ["codeql-testing/codeql-pack1@1.0.0", "codeql-testing/codeql-pack2", "codeql/javascript-queries" ]
-            },
-            "queries": [
-              { "uses": "./codeql-qlpacks/complex-javascript-qlpack/show_ifs.ql" },
-              { "uses": "./codeql-qlpacks/complex-javascript-qlpack/foo2/show_ifs.ql" }
-            ]
-          }
-        languages: javascript
-        queries: + ./codeql-qlpacks/complex-javascript-qlpack/show_ifs.ql
-        packs: + codeql/javascript-queries
-        config-file-test: .github/codeql/queries-and-packs-config.yml
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - name: Queries from input
+        if: success() || failure()
+        uses: ./../action/.github/actions/check-codescanning-config
+        with:
+          expected-config-file-contents: |
+            {
+              "queries": [{ "uses": "./codeql-qlpacks/complex-javascript-qlpack/show_ifs.ql" }]
+            }
+          languages: javascript
+          queries: ./codeql-qlpacks/complex-javascript-qlpack/show_ifs.ql
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
 
-    - name: Multi-language packs from config
-      if: success() || failure()
-      uses: ./../action/.github/actions/check-codescanning-config
-      with:
-        expected-config-file-contents: |
-          {
-            "packs": {
-              "javascript": ["codeql-testing/codeql-pack1@1.0.0", "codeql-testing/codeql-pack2" ],
-              "ruby": ["codeql/ruby-queries"]
-            },
-            "queries": [
-              { "uses": "./codeql-qlpacks/complex-javascript-qlpack/foo2/show_ifs.ql" }
-            ]
-          }
-        languages: javascript,ruby
-        config-file-test: .github/codeql/multi-language-packs-config.yml
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - name: Queries from input with +
+        if: success() || failure()
+        uses: ./../action/.github/actions/check-codescanning-config
+        with:
+          expected-config-file-contents: |
+            {
+              "queries": [{ "uses": "./codeql-qlpacks/complex-javascript-qlpack/show_ifs.ql" }]
+            }
+          languages: javascript
+          queries: + ./codeql-qlpacks/complex-javascript-qlpack/show_ifs.ql
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
 
-    - name: Other config properties
-      if: success() || failure()
-      uses: ./../action/.github/actions/check-codescanning-config
-      with:
-        expected-config-file-contents: |
-          {
-            "name": "Config using all properties",
-            "packs": ["codeql/javascript-queries" ],
-            "disable-default-queries": true,
-            "paths-ignore": ["xxx"],
-            "paths": ["yyy"]
-          }
-        languages: javascript
-        packs: + codeql/javascript-queries
-        config-file-test: .github/codeql/other-config-properties.yml
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - name: Queries and packs from input with +
+        if: success() || failure()
+        uses: ./../action/.github/actions/check-codescanning-config
+        with:
+          expected-config-file-contents: |
+            {
+              "queries": [{ "uses": "./codeql-qlpacks/complex-javascript-qlpack/show_ifs.ql" }],
+              "packs": ["codeql-testing/codeql-pack1@1.0.0", "codeql-testing/codeql-pack2" ]
+            }
+          languages: javascript
+          queries: + ./codeql-qlpacks/complex-javascript-qlpack/show_ifs.ql
+          packs: + codeql-testing/codeql-pack1@1.0.0, codeql-testing/codeql-pack2
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+
+      - name: Queries and packs from config
+        if: success() || failure()
+        uses: ./../action/.github/actions/check-codescanning-config
+        with:
+          expected-config-file-contents: |
+            {
+              "queries": [{ "uses": "./codeql-qlpacks/complex-javascript-qlpack/foo2/show_ifs.ql" }],
+              "packs": {
+                "javascript": ["codeql-testing/codeql-pack1@1.0.0", "codeql-testing/codeql-pack2" ]
+              }
+            }
+          languages: javascript
+          config-file-test: .github/codeql/queries-and-packs-config.yml
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+
+      - name: Queries and packs from config overriden by input
+        if: success() || failure()
+        uses: ./../action/.github/actions/check-codescanning-config
+        with:
+          expected-config-file-contents: |
+            {
+              "queries": [{ "uses": "./codeql-qlpacks/complex-javascript-qlpack/show_ifs.ql" }],
+              "packs": ["codeql/javascript-queries"]
+            }
+          languages: javascript
+          queries: ./codeql-qlpacks/complex-javascript-qlpack/show_ifs.ql
+          packs: codeql/javascript-queries
+          config-file-test: .github/codeql/queries-and-packs-config.yml
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+
+      - name: Queries and packs from config merging with input
+        if: success() || failure()
+        uses: ./../action/.github/actions/check-codescanning-config
+        with:
+          expected-config-file-contents: |
+            {
+              "packs": {
+                "javascript": ["codeql-testing/codeql-pack1@1.0.0", "codeql-testing/codeql-pack2", "codeql/javascript-queries" ]
+              },
+              "queries": [
+                { "uses": "./codeql-qlpacks/complex-javascript-qlpack/show_ifs.ql" },
+                { "uses": "./codeql-qlpacks/complex-javascript-qlpack/foo2/show_ifs.ql" }
+              ]
+            }
+          languages: javascript
+          queries: + ./codeql-qlpacks/complex-javascript-qlpack/show_ifs.ql
+          packs: + codeql/javascript-queries
+          config-file-test: .github/codeql/queries-and-packs-config.yml
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+
+      - name: Multi-language packs from config
+        if: success() || failure()
+        uses: ./../action/.github/actions/check-codescanning-config
+        with:
+          expected-config-file-contents: |
+            {
+              "packs": {
+                "javascript": ["codeql-testing/codeql-pack1@1.0.0", "codeql-testing/codeql-pack2" ],
+                "ruby": ["codeql/ruby-queries"]
+              },
+              "queries": [
+                { "uses": "./codeql-qlpacks/complex-javascript-qlpack/foo2/show_ifs.ql" }
+              ]
+            }
+          languages: javascript,ruby
+          config-file-test: .github/codeql/multi-language-packs-config.yml
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+
+      - name: Other config properties
+        if: success() || failure()
+        uses: ./../action/.github/actions/check-codescanning-config
+        with:
+          expected-config-file-contents: |
+            {
+              "name": "Config using all properties",
+              "packs": ["codeql/javascript-queries" ],
+              "disable-default-queries": true,
+              "paths-ignore": ["xxx"],
+              "paths": ["yyy"]
+            }
+          languages: javascript
+          packs: + codeql/javascript-queries
+          config-file-test: .github/codeql/other-config-properties.yml
+          tools: ${{ steps.prepare-test.outputs.tools-url }}

.github/workflows/debug-artifacts-failure-safe.yml

@@ -6,13 +6,13 @@ env:
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
   merge_group:
     types: [checks_requested]
   schedule:
-    - cron: '0 5 * * *'
+    - cron: "0 5 * * *"
   workflow_dispatch:
 
 concurrency:
@@ -30,10 +30,10 @@ jobs:
       fail-fast: false
       matrix:
         version:
-        - stable-v2.20.3
-        - default
-        - linked
-        - nightly-latest
+          - stable-v2.20.7
+          - default
+          - linked
+          - nightly-latest
     name: Upload debug artifacts after failure in analyze
     continue-on-error: true
     env:
@@ -43,7 +43,12 @@ jobs:
       # We currently need `security-events: read` to access feature flags.
       security-events: read
     timeout-minutes: 45
-    runs-on: ubuntu-latest
+
+    # stable-v2.20.7 requires an older version of Java than the default on `ubuntu-latest` (`ubuntu-26.04`).
+    # We could install that older version on the newer runners, or use the older runner.
+    # We do the latter here. This can be removed once we stop supporting `v2.20.7`.
+    runs-on: ${{ case(matrix.version == 'stable-v2.20.7', 'ubuntu-24.04', 'ubuntu-26.04') }}
+
     steps:
       - name: Dump GitHub event
         run: cat "${GITHUB_EVENT_PATH}"
@@ -60,7 +65,7 @@ jobs:
       - name: Install .NET
         uses: actions/setup-dotnet@a98b56852c35b8e3190ac28c8c2271da59106c68 # v6.0.0
         with:
-          dotnet-version: '9.x'
+          dotnet-version: "9.x"
       - name: Assert best-effort artifact scan completed
         uses: ./../action/.github/actions/verify-debug-artifact-scan-completed
       - uses: ./../action/init
@@ -86,12 +91,13 @@ jobs:
     timeout-minutes: 45
     permissions:
       contents: read
-    runs-on: ubuntu-latest
+    runs-on: ubuntu-26.04
     steps:
       - name: Download all artifacts
-        uses: actions/download-artifact@3e5f45b2cfb9172054b4087a40e8e0b5a5461e7c # v8.0.1
+        uses: actions/download-artifact@9000827ccba6bdab643e8b6fd33ac0654aef8333 # v8.0.2
       - name: Check expected artifacts exist
         run: |
+          VERSIONS="stable-v2.20.7 default linked nightly-latest"
           LANGUAGES="cpp csharp go java javascript python"
           for version in $VERSIONS; do
             echo "Artifacts from version $version:"

.github/workflows/debug-artifacts-safe.yml

@@ -5,13 +5,13 @@ env:
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
   merge_group:
     types: [checks_requested]
   schedule:
-    - cron: '0 5 * * *'
+    - cron: "0 5 * * *"
   workflow_dispatch:
 
 concurrency:
@@ -29,10 +29,10 @@ jobs:
       fail-fast: false
       matrix:
         version:
-        - stable-v2.20.3
-        - default
-        - linked
-        - nightly-latest
+          - stable-v2.20.7
+          - default
+          - linked
+          - nightly-latest
     name: Upload debug artifacts
     env:
       CODEQL_ACTION_TEST_MODE: true
@@ -41,7 +41,12 @@ jobs:
       contents: read
       # We currently need `security-events: read` to access feature flags.
       security-events: read
-    runs-on: ubuntu-latest
+
+    # stable-v2.20.7 requires an older version of Java than the default on `ubuntu-latest` (`ubuntu-26.04`).
+    # We could install that older version on the newer runners, or use the older runner.
+    # We do the latter here. This can be removed once we stop supporting `v2.20.7`.
+    runs-on: ${{ case(matrix.version == 'stable-v2.20.7', 'ubuntu-24.04', 'ubuntu-26.04') }}
+
     steps:
       - name: Check out repository
         uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
@@ -56,7 +61,7 @@ jobs:
       - name: Install .NET
         uses: actions/setup-dotnet@a98b56852c35b8e3190ac28c8c2271da59106c68 # v6.0.0
         with:
-          dotnet-version: '9.x'
+          dotnet-version: "9.x"
       - name: Assert best-effort artifact scan completed
         uses: ./../action/.github/actions/verify-debug-artifact-scan-completed
       - uses: ./../action/init
@@ -79,13 +84,13 @@ jobs:
     timeout-minutes: 45
     permissions:
       contents: read
-    runs-on: ubuntu-latest
+    runs-on: ubuntu-26.04
     steps:
       - name: Download all artifacts
-        uses: actions/download-artifact@3e5f45b2cfb9172054b4087a40e8e0b5a5461e7c # v8.0.1
+        uses: actions/download-artifact@9000827ccba6bdab643e8b6fd33ac0654aef8333 # v8.0.2
       - name: Check expected artifacts exist
         run: |
-          VERSIONS="stable-v2.20.3 default linked nightly-latest"
+          VERSIONS="stable-v2.20.7 default linked nightly-latest"
           LANGUAGES="cpp csharp go java javascript python"
           for version in $VERSIONS; do
             pushd "./my-debug-artifacts-${version//./}"

.github/workflows/deflake.yml

@@ -60,7 +60,6 @@ on:
       - "PR Check - Proxy test"
       - "PR Check - Remote config file"
       - "PR Check - Resolve environment"
-      - "PR Check - RuboCop multi-language"
       - "PR Check - Ruby analysis"
       - "PR Check - Rust analysis"
       - "PR Check - Split workflow"

.github/workflows/post-release-mergeback.yml

@@ -10,7 +10,7 @@ on:
   workflow_dispatch:
     inputs:
       baseBranch:
-        description: 'The base branch to merge into'
+        description: "The base branch to merge into"
         default: main
         required: false
 
@@ -24,7 +24,7 @@ defaults:
 
 jobs:
   merge-back:
-    runs-on: ubuntu-latest
+    runs-on: ubuntu-26.04
     environment: Automation
     if: github.repository == 'github/codeql-action'
     env:
@@ -41,16 +41,16 @@ jobs:
 
       - name: Dump GitHub context
         env:
-          GITHUB_CONTEXT: '${{ toJson(github) }}'
+          GITHUB_CONTEXT: "${{ toJson(github) }}"
         run: echo "${GITHUB_CONTEXT}"
 
       - uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
         with:
-          fetch-depth: 0  # ensure we have all tags and can push commits
-      - uses: actions/setup-node@820762786026740c76f36085b0efc47a31fe5020 # v7.0.0
+          fetch-depth: 0 # ensure we have all tags and can push commits
+      - uses: actions/setup-node@949feb2413d6458794dcd2491c4babbbce0c15c1 # v7.1.0
         with:
           node-version: 24
-          cache: 'npm'
+          cache: "npm"
 
       - name: Install JavaScript dependencies
         run: npm ci
@@ -134,7 +134,7 @@ jobs:
           echo "::endgroup::"
 
       - name: Generate token
-        uses: actions/create-github-app-token@bcd2ba49218906704ab6c1aa796996da409d3eb1 # v3.2.0
+        uses: actions/create-github-app-token@64ab729a6294000f5aa4a4bc0b73d1f32bc45510 # v3.3.0
         id: app-token
         with:
           app-id: ${{ vars.AUTOMATION_APP_ID }}

.github/workflows/pr-checks.yml

@@ -1,11 +1,17 @@
 name: PR Checks
 
 on:
+  push:
+    branches:
+      - "main"
+      - "releases/v*"
+  pull_request:
+  merge_group:
+    types: [checks_requested]
   workflow_dispatch:
-  workflow_call:
 
 concurrency:
-  cancel-in-progress: ${{ github.event_name == 'pull_request' || github.event_name == 'workflow_call' }}
+  cancel-in-progress: ${{ github.event_name == 'pull_request' || false }}
   group: ${{ github.workflow }}-${{ github.ref }}
 
 defaults:
@@ -19,7 +25,7 @@ jobs:
     strategy:
       fail-fast: false
       matrix:
-        os: [ubuntu-latest, macos-latest, windows-latest]
+        os: [ubuntu-26.04, macos-26, windows-2025]
         node-version: [20, 24]
     permissions:
       contents: read
@@ -39,7 +45,7 @@ jobs:
       - uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
 
       - name: Set up Node.js
-        uses: actions/setup-node@820762786026740c76f36085b0efc47a31fe5020 # v7.0.0
+        uses: actions/setup-node@949feb2413d6458794dcd2491c4babbbce0c15c1 # v7.1.0
         with:
           node-version: ${{ matrix.node-version }}
           cache: "npm"
@@ -58,14 +64,14 @@ jobs:
           npm ci
 
       - name: Verify compiled JS up to date
-        run: .github/workflows/script/check-js.sh
+        run: npx tsx pr-checks/check-unchanged.ts --language javascript
 
       - name: Run unit tests
         if: always()
         run: npm test
 
       - name: Lint
-        if: always() && matrix.os != 'windows-latest'
+        if: always() && matrix.os != 'windows-2025'
         run: npm run lint-ci
 
       - name: Upload sarif
@@ -75,7 +81,7 @@ jobs:
         # paired `push` run that the queue branch creates use that ref, so gate on the ref itself
         # rather than the event. The same results are uploaded by the `pull_request` run and again
         # by the `push` run on `main`.
-        if: matrix.os == 'ubuntu-latest' && matrix.node-version == 24 && !startsWith(github.ref, 'refs/heads/gh-readonly-queue/')
+        if: matrix.os == 'ubuntu-26.04' && matrix.node-version == 24 && !startsWith(github.ref, 'refs/heads/gh-readonly-queue/')
         with:
           sarif_file: eslint.sarif
           category: eslint
@@ -87,7 +93,7 @@ jobs:
     if: github.triggering_actor != 'dependabot[bot]'
     permissions:
       contents: read
-    runs-on: ubuntu-latest
+    runs-on: ubuntu-26.04
     timeout-minutes: 10
 
     concurrency:
@@ -107,7 +113,7 @@ jobs:
           fi
 
       - name: Set up Node.js
-        uses: actions/setup-node@820762786026740c76f36085b0efc47a31fe5020 # v7.0.0
+        uses: actions/setup-node@949feb2413d6458794dcd2491c4babbbce0c15c1 # v7.1.0
         with:
           node-version: 24
           cache: "npm"
@@ -116,14 +122,22 @@ jobs:
         id: install-deps
         run: npm ci
 
+      - name: Verify YAML is correctly formatted
+        run: npx tsx pr-checks/check-unchanged.ts --language yaml
+
       - name: Verify PR checks up to date
         if: ${{ !cancelled() && steps.install-deps.outcome == 'success' }}
         run: .github/workflows/script/verify-pr-checks.sh
 
+      - name: Typecheck pr-checks scripts
+        if: ${{ !cancelled() && steps.install-deps.outcome == 'success' }}
+        working-directory: pr-checks
+        run: npm run typecheck
+
       - name: Run pr-checks tests
         if: ${{ !cancelled() && steps.install-deps.outcome == 'success' }}
         working-directory: pr-checks
-        run: npx tsx --test
+        run: npm run test
 
       - name: Run `pr-checks/changenotes.ts` to ensure that all unreleased change notes are valid
         if: ${{ !cancelled() && steps.install-deps.outcome == 'success' }}
@@ -142,12 +156,11 @@ jobs:
 
       - name: Fetch base commit
         id: fetch-base
-        # Forks and Dependabot PRs don't have permission to write comments, so skip the repo size
-        # check in those cases.
+        # Skip this (and subsequent steps) if the PR originates from a fork, since this workflow
+        # won't have the necessary permissions to post comments on the PR.
         if: >-
           github.event_name == 'pull_request' &&
-          github.event.pull_request.head.repo.full_name == github.repository &&
-          github.event.pull_request.user.login != 'dependabot[bot]'
+          github.event.pull_request.head.repo.full_name == github.repository
         env:
           BASE_SHA: ${{ github.event.pull_request.base.sha }}
           HEAD_SHA: ${{ github.event.pull_request.head.sha }}
@@ -172,7 +185,7 @@ jobs:
 
       - name: Upload repo size comment
         if: steps.fetch-base.outcome == 'success'
-        uses: actions/upload-artifact@043fb46d1a93c77aae656e7c1c64a875d1fc6a0a # v7.0.1
+        uses: actions/upload-artifact@cf430e030ddbb5b0abf93d22962f4752f3646cd9 # v7.0.2
         with:
           name: repo-size-comment
           path: ${{ runner.temp }}/repo-size/
@@ -206,7 +219,7 @@ jobs:
     if: >-
       github.event_name == 'pull_request' &&
       github.event.pull_request.head.repo.full_name == github.repository &&
-      github.event.pull_request.user.login != 'dependabot[bot]' &&
+      github.actor != 'dependabot[bot]' &&
       needs.other-checks.result == 'success'
     permissions:
       contents: read
@@ -220,7 +233,7 @@ jobs:
 
     steps:
       - name: Download repo size comment
-        uses: actions/download-artifact@3e5f45b2cfb9172054b4087a40e8e0b5a5461e7c # v8.0.1
+        uses: actions/download-artifact@9000827ccba6bdab643e8b6fd33ac0654aef8333 # v8.0.2
         with:
           name: repo-size-comment
           path: repo-size-comment

.github/workflows/pr-dequeued.yml

@@ -0,0 +1,43 @@
+name: PR dequeued
+
+on:
+  pull_request:
+    types:
+      - dequeued
+
+jobs:
+  notify:
+    name: Notify
+    runs-on: ubuntu-slim
+
+    if: github.event.pull_request.merged != true
+
+    permissions:
+      pull-requests: write
+
+    steps:
+      - name: Notify that the PR was removed from the merge queue
+        env:
+          GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+          PR_NUMBER: ${{ github.event.pull_request.number }}
+          REASON: ${{ github.event.reason }}
+        run: |
+          # Mention whoever added the PR to the merge queue rather than the PR author, who may be a
+          # bot such as Dependabot. The `dequeued` event payload doesn't identify the enqueuer, so
+          # look them up in the most recent `AddedToMergeQueueEvent` on the PR's timeline.
+          enqueuer=$(gh api graphql \
+            -F number="$PR_NUMBER" \
+            -f query='
+              query($number: Int!) {
+                repository(owner: "github", name: "codeql-action") {
+                  pullRequest(number: $number) {
+                    timelineItems(itemTypes: [ADDED_TO_MERGE_QUEUE_EVENT], last: 1) {
+                      nodes { ... on AddedToMergeQueueEvent { enqueuer { login } } }
+                    }
+                  }
+                }
+              }' \
+            --jq '.data.repository.pullRequest.timelineItems.nodes[0].enqueuer.login')
+          echo "@$enqueuer The pull request was removed from the merge queue (\`$REASON\`)." \
+            "Please resolve any issues if required and enqueue the PR again." |
+            gh pr comment --body-file - --repo github/codeql-action "$PR_NUMBER"

.github/workflows/prepare-release.yml

@@ -29,7 +29,7 @@ defaults:
 jobs:
   prepare:
     name: "Release info"
-    runs-on: ubuntu-latest
+    runs-on: ubuntu-26.04
     if: github.repository == 'github/codeql-action'
 
     permissions:

.github/workflows/publish-immutable-action.yml

@@ -1,10 +1,10 @@
-name: 'Publish Immutable Action Version'
+name: "Publish Immutable Action Version"
 
 on:
   push:
     tags:
       # Match version tags, but not the major version tags.
-      - 'v[0-9]+.**'
+      - "v[0-9]+.**"
 
 defaults:
   run:

.github/workflows/python312-windows.yml

@@ -8,7 +8,7 @@ on:
     types: [checks_requested]
   schedule:
     # Weekly on Monday.
-    - cron: '0 0 * * 1'
+    - cron: "0 0 * * 1"
   workflow_dispatch:
 
 concurrency:
@@ -29,25 +29,25 @@ jobs:
       contents: read
       # We currently need `security-events: read` to access feature flags.
       security-events: read
-    runs-on: windows-latest
+    runs-on: windows-2025
 
     steps:
-    - uses: actions/setup-python@5fda3b95a4ea91299a34e894583c3862153e4b97 # v7.0.0
-      with:
-        python-version: 3.12
+      - uses: actions/setup-python@6d4fd22b20465ccc0f7354476588e8df7c9ca0e0 # v7.1.0
+        with:
+          python-version: 3.12
 
-    - uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
 
-    - name: Prepare test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: default
+      - name: Prepare test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: default
 
-    - name: Initialize CodeQL
-      uses: ./../action/init
-      with:
-        tools: linked
-        languages: python
+      - name: Initialize CodeQL
+        uses: ./../action/init
+        with:
+          tools: linked
+          languages: python
 
-    - name: Analyze
-      uses: ./../action/analyze
+      - name: Analyze
+        uses: ./../action/analyze

.github/workflows/query-filters.yml

@@ -3,13 +3,13 @@ name: Query filters tests
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
   merge_group:
     types: [checks_requested]
   schedule:
-    - cron: '0 5 * * *'
+    - cron: "0 5 * * *"
   workflow_dispatch:
 
 concurrency:
@@ -25,51 +25,51 @@ jobs:
     name: Query Filters Tests
     if: github.triggering_actor != 'dependabot[bot]'
     timeout-minutes: 45
-    runs-on: ubuntu-latest
+    runs-on: ubuntu-26.04
     permissions:
       contents: read # This permission is needed to allow the GitHub Actions workflow to read the contents of the repository.
     steps:
-    - name: Check out repository
-      uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
 
-    - name: Install Node.js
-      uses: actions/setup-node@820762786026740c76f36085b0efc47a31fe5020 # v7.0.0
-      with:
-        node-version: 24
-        cache: npm
+      - name: Install Node.js
+        uses: actions/setup-node@949feb2413d6458794dcd2491c4babbbce0c15c1 # v7.1.0
+        with:
+          node-version: 24
+          cache: npm
 
-    - name: Install dependencies
-      run: npm ci
+      - name: Install dependencies
+        run: npm ci
 
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: linked
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: linked
 
-    - name: Check SARIF for default queries with Single include, Single exclude
-      uses: ./../action/.github/actions/query-filter-test
-      with:
-        sarif-file:  ${{ runner.temp }}/results/javascript.sarif
-        queries-run: js/zipslip
-        queries-not-run: js/path-injection
-        config-file: ./.github/codeql/codeql-config-query-filters1.yml
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - name: Check SARIF for default queries with Single include, Single exclude
+        uses: ./../action/.github/actions/query-filter-test
+        with:
+          sarif-file: ${{ runner.temp }}/results/javascript.sarif
+          queries-run: js/zipslip
+          queries-not-run: js/path-injection
+          config-file: ./.github/codeql/codeql-config-query-filters1.yml
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
 
-    - name: Check SARIF for query packs with Single include, Single exclude
-      uses: ./../action/.github/actions/query-filter-test
-      with:
-        sarif-file:  ${{ runner.temp }}/results/javascript.sarif
-        queries-run: js/zipslip,javascript/example/empty-or-one-block
-        queries-not-run: js/path-injection
-        config-file: ./.github/codeql/codeql-config-query-filters2.yml
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - name: Check SARIF for query packs with Single include, Single exclude
+        uses: ./../action/.github/actions/query-filter-test
+        with:
+          sarif-file: ${{ runner.temp }}/results/javascript.sarif
+          queries-run: js/zipslip,javascript/example/empty-or-one-block
+          queries-not-run: js/path-injection
+          config-file: ./.github/codeql/codeql-config-query-filters2.yml
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
 
-    - name: Check SARIF for query packs and local queries with Single include, Single exclude
-      uses: ./../action/.github/actions/query-filter-test
-      with:
-        sarif-file:  ${{ runner.temp }}/results/javascript.sarif
-        queries-run: js/zipslip,javascript/example/empty-or-one-block,inrepo-javascript-querypack/show-ifs
-        queries-not-run: js/path-injection,complex-python-querypack/show-ifs,complex-python-querypack/foo/bar/show-ifs
-        config-file: ./.github/codeql/codeql-config-query-filters3.yml
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - name: Check SARIF for query packs and local queries with Single include, Single exclude
+        uses: ./../action/.github/actions/query-filter-test
+        with:
+          sarif-file: ${{ runner.temp }}/results/javascript.sarif
+          queries-run: js/zipslip,javascript/example/empty-or-one-block,inrepo-javascript-querypack/show-ifs
+          queries-not-run: js/path-injection,complex-python-querypack/show-ifs,complex-python-querypack/foo/bar/show-ifs
+          config-file: ./.github/codeql/codeql-config-query-filters3.yml
+          tools: ${{ steps.prepare-test.outputs.tools-url }}

.github/workflows/rebuild.yml

@@ -12,7 +12,7 @@ defaults:
 jobs:
   rebuild:
     name: Rebuild Action
-    runs-on: ubuntu-latest
+    runs-on: ubuntu-26.04
     if: github.event.label.name == 'Rebuild' || github.event_name == 'workflow_dispatch'
 
     env:
@@ -30,10 +30,10 @@ jobs:
           ref: ${{ env.HEAD_REF }}
 
       - name: Set up Node.js
-        uses: actions/setup-node@820762786026740c76f36085b0efc47a31fe5020 # v7.0.0
+        uses: actions/setup-node@949feb2413d6458794dcd2491c4babbbce0c15c1 # v7.1.0
         with:
           node-version: 24
-          cache: 'npm'
+          cache: "npm"
 
       - name: Remove label
         if: github.event_name == 'pull_request'

.github/workflows/rollback-release.yml

@@ -34,7 +34,7 @@ jobs:
   rollback:
     name: "Create rollback release"
     if: github.repository == 'github/codeql-action'
-    runs-on: ubuntu-latest
+    runs-on: ubuntu-26.04
     timeout-minutes: 45
 
     # Don't set the deployment environment for test runs
@@ -139,7 +139,7 @@ jobs:
 
       - name: Generate token
         if: github.event_name == 'workflow_dispatch'
-        uses: actions/create-github-app-token@bcd2ba49218906704ab6c1aa796996da409d3eb1 # v3.2.0
+        uses: actions/create-github-app-token@64ab729a6294000f5aa4a4bc0b73d1f32bc45510 # v3.3.0
         id: app-token
         with:
           app-id: ${{ vars.AUTOMATION_APP_ID }}

.github/workflows/script/check-js.sh

@@ -1,33 +0,0 @@
-#!/bin/bash
-set -eu
-
-# Sanity check that repo is clean to start with
-if [ ! -z "$(git status --porcelain)" ]; then
-    # If we get a fail here then this workflow needs attention...
-    >&2 echo "Failed: Repo should be clean before testing!"
-    exit 1
-fi
-# Wipe the lib directory in case there are extra unnecessary files in there
-rm -rf lib
-# Generate the JavaScript files
-npm run-script build
-# Check that repo is still clean
-if [ ! -z "$(git status --porcelain)" ]; then
-    # If we get a fail here then the PR needs attention
-    >&2 echo "Failed: JavaScript files are not up to date. Run 'rm -rf lib && npm run-script build' to update"
-    git status
-
-    echo "### Transpiled JS diff" >> $GITHUB_STEP_SUMMARY
-    echo "" >> $GITHUB_STEP_SUMMARY
-    echo '```diff' >> $GITHUB_STEP_SUMMARY
-    git diff --output="$RUNNER_TEMP/js.diff"
-    cat "$RUNNER_TEMP/js.diff" >> $GITHUB_STEP_SUMMARY
-    echo '```' >> $GITHUB_STEP_SUMMARY
-
-    # Reset bundled files to allow other checks to test for changes
-    git checkout lib
-
-    # Fail this check
-    exit 1
-fi
-echo "Success: JavaScript files are up to date"

.github/workflows/test-codeql-bundle-all.yml

@@ -1,17 +1,17 @@
-name: 'PR Check - CodeQL Bundle All'
+name: "PR Check - CodeQL Bundle All"
 env:
   GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
   GO111MODULE: auto
 on:
   push:
     branches:
-    - main
-    - releases/v*
+      - main
+      - releases/v*
   pull_request:
   merge_group:
     types: [checks_requested]
   schedule:
-    - cron: '0 5 * * *'
+    - cron: "0 5 * * *"
   workflow_dispatch:
 
 concurrency:
@@ -27,9 +27,9 @@ jobs:
       fail-fast: false
       matrix:
         include:
-        - os: ubuntu-latest
-          version: nightly-latest
-    name: 'CodeQL Bundle All'
+          - os: ubuntu-26.04
+            version: nightly-latest
+    name: "CodeQL Bundle All"
     if: github.triggering_actor != 'dependabot[bot]'
     permissions:
       contents: read
@@ -37,26 +37,26 @@ jobs:
     timeout-minutes: 45
     runs-on: ${{ matrix.os }}
     steps:
-    - name: Check out repository
-      uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-    - name: Prepare test
-      id: prepare-test
-      uses: ./.github/actions/prepare-test
-      with:
-        version: ${{ matrix.version }}
-        use-all-platform-bundle: true
-    - name: Install .NET
-      uses: actions/setup-dotnet@a98b56852c35b8e3190ac28c8c2271da59106c68 # v6.0.0
-      with:
-        dotnet-version: '9.x'
-    - id: init
-      uses: ./../action/init
-      with:
-        # We manually exclude Swift from the languages list here, as it is not supported on Ubuntu
-        languages: cpp,csharp,go,java,javascript,python,ruby
-        tools: ${{ steps.prepare-test.outputs.tools-url }}
-    - name: Build code
-      run: ./build.sh
-    - uses: ./../action/analyze
+      - name: Check out repository
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+      - name: Prepare test
+        id: prepare-test
+        uses: ./.github/actions/prepare-test
+        with:
+          version: ${{ matrix.version }}
+          use-all-platform-bundle: true
+      - name: Install .NET
+        uses: actions/setup-dotnet@a98b56852c35b8e3190ac28c8c2271da59106c68 # v6.0.0
+        with:
+          dotnet-version: "9.x"
+      - id: init
+        uses: ./../action/init
+        with:
+          # We manually exclude Swift from the languages list here, as it is not supported on Ubuntu
+          languages: cpp,csharp,go,java,javascript,python,ruby
+          tools: ${{ steps.prepare-test.outputs.tools-url }}
+      - name: Build code
+        run: ./build.sh
+      - uses: ./../action/analyze
     env:
       CODEQL_ACTION_TEST_MODE: true

.github/workflows/update-bundle.yml

@@ -20,7 +20,7 @@ defaults:
 jobs:
   update-bundle:
     if: github.event.release.prerelease && startsWith(github.event.release.tag_name, 'codeql-bundle-')
-    runs-on: ubuntu-latest
+    runs-on: ubuntu-26.04
     permissions:
       contents: write # needed to push commits
       pull-requests: write # needed to create pull requests
@@ -30,7 +30,7 @@ jobs:
 
       - name: Dump GitHub context
         env:
-          GITHUB_CONTEXT: '${{ toJson(github) }}'
+          GITHUB_CONTEXT: "${{ toJson(github) }}"
         run: echo "$GITHUB_CONTEXT"
 
       - uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
@@ -41,10 +41,10 @@ jobs:
           git config --global user.name "github-actions[bot]"
 
       - name: Set up Node.js
-        uses: actions/setup-node@820762786026740c76f36085b0efc47a31fe5020 # v7.0.0
+        uses: actions/setup-node@949feb2413d6458794dcd2491c4babbbce0c15c1 # v7.1.0
         with:
           node-version: 24
-          cache: 'npm'
+          cache: "npm"
 
       - name: Install dependencies
         run: npm ci
@@ -113,11 +113,12 @@ jobs:
           echo "CLI_VERSION=$cli_version" | tee -a "$GITHUB_ENV"
           echo "PR_URL=$pr_url" | tee -a "$GITHUB_ENV"
 
-      - name: Create changelog note
+      - name: Create changenote
         run: |
           npx tsx pr-checks/bundle-changelog.ts
 
-      - name: Push changelog note
+      - name: Push changenote
         run: |
-          git commit -am "Add changelog note"
+          git add unreleased-change-notes
+          git commit -m "Add changenote"
           git push

.github/workflows/update-release-branch.yml

@@ -26,7 +26,7 @@ jobs:
   update:
     name: "Update release branch"
     timeout-minutes: 45
-    runs-on: ubuntu-latest
+    runs-on: ubuntu-26.04
     if: github.event_name == 'workflow_dispatch'
     needs: [prepare]
     env:
@@ -38,48 +38,48 @@ jobs:
       contents: write # needed to push commits
       pull-requests: write # needed to create pull request
     steps:
-    - uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      with:
-        fetch-depth: 0  # Need full history for calculation of diffs
-    - uses: ./.github/actions/release-initialise
+      - uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+        with:
+          fetch-depth: 0 # Need full history for calculation of diffs
+      - uses: ./.github/actions/release-initialise
 
-    # when the workflow has been manually triggered on main,
-    # we know that we definitely want the release branch to exist
-    - name: Ensure release branch exists
-      run: |
-        echo "MAJOR_VERSION ${MAJOR_VERSION}"
-        RELEASE_BRANCH=releases/${MAJOR_VERSION}
-        if git checkout $RELEASE_BRANCH > /dev/null 2>&1; then
-            echo "Branch $RELEASE_BRANCH already exists"
-            echo ""
-        else
-            echo "Creating $RELEASE_BRANCH branch"
-            git checkout -b ${RELEASE_BRANCH} ${LATEST_TAG}
-            git push --set-upstream origin ${RELEASE_BRANCH}
-            git branch --show-current
-            echo ""
-        fi
-        echo "Returning to branch: ${REF_NAME}"
-        git checkout ${REF_NAME}
+      # when the workflow has been manually triggered on main,
+      # we know that we definitely want the release branch to exist
+      - name: Ensure release branch exists
+        run: |
+          echo "MAJOR_VERSION ${MAJOR_VERSION}"
+          RELEASE_BRANCH=releases/${MAJOR_VERSION}
+          if git checkout $RELEASE_BRANCH > /dev/null 2>&1; then
+              echo "Branch $RELEASE_BRANCH already exists"
+              echo ""
+          else
+              echo "Creating $RELEASE_BRANCH branch"
+              git checkout -b ${RELEASE_BRANCH} ${LATEST_TAG}
+              git push --set-upstream origin ${RELEASE_BRANCH}
+              git branch --show-current
+              echo ""
+          fi
+          echo "Returning to branch: ${REF_NAME}"
+          git checkout ${REF_NAME}
 
-    - name: Update current release branch
-      if: github.event_name == 'workflow_dispatch'
-      env:
-        GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-      run: |
-        echo SOURCE_BRANCH=${REF_NAME}
-        echo TARGET_BRANCH=releases/${MAJOR_VERSION}
-        npx tsx ./pr-checks/update-release-branch.ts \
-          --repository-nwo ${{ github.repository }} \
-          --source-branch '${{ env.REF_NAME }}' \
-          --target-branch 'releases/${{ env.MAJOR_VERSION }}' \
-          --is-primary-release \
-          --conductor ${GITHUB_ACTOR}
+      - name: Update current release branch
+        if: github.event_name == 'workflow_dispatch'
+        env:
+          GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+        run: |
+          echo SOURCE_BRANCH=${REF_NAME}
+          echo TARGET_BRANCH=releases/${MAJOR_VERSION}
+          npx tsx ./pr-checks/update-release-branch.ts \
+            --repository-nwo ${{ github.repository }} \
+            --source-branch '${{ env.REF_NAME }}' \
+            --target-branch 'releases/${{ env.MAJOR_VERSION }}' \
+            --is-primary-release \
+            --conductor ${GITHUB_ACTOR}
 
   backport:
     name: "Create backport"
     timeout-minutes: 45
-    runs-on: ubuntu-latest
+    runs-on: ubuntu-26.04
     environment: Automation
     needs: [prepare]
     if: ${{ (github.event_name == 'push') && needs.prepare.outputs.backport_target_branches != '[]' }}
@@ -94,28 +94,28 @@ jobs:
       contents: write # needed to push commits
       pull-requests: write # needed to create pull request
     steps:
-    - name: Generate token
-      uses: actions/create-github-app-token@bcd2ba49218906704ab6c1aa796996da409d3eb1 # v3.2.0
-      id: app-token
-      with:
-        app-id: ${{ vars.AUTOMATION_APP_ID }}
-        private-key: ${{ secrets.AUTOMATION_PRIVATE_KEY }}
+      - name: Generate token
+        uses: actions/create-github-app-token@64ab729a6294000f5aa4a4bc0b73d1f32bc45510 # v3.3.0
+        id: app-token
+        with:
+          app-id: ${{ vars.AUTOMATION_APP_ID }}
+          private-key: ${{ secrets.AUTOMATION_PRIVATE_KEY }}
 
-    - name: Checkout
-      uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
-      with:
-        fetch-depth: 0  # Need full history for calculation of diffs
-        token: ${{ steps.app-token.outputs.token }}
-    - uses: ./.github/actions/release-initialise
+      - name: Checkout
+        uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
+        with:
+          fetch-depth: 0 # Need full history for calculation of diffs
+          token: ${{ steps.app-token.outputs.token }}
+      - uses: ./.github/actions/release-initialise
 
-    - name: Update older release branch
-      env:
-        GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-      run: |
-        echo SOURCE_BRANCH=${SOURCE_BRANCH}
-        echo TARGET_BRANCH=${TARGET_BRANCH}
-        npx tsx ./pr-checks/update-release-branch.ts \
-          --repository-nwo ${{ github.repository }} \
-          --source-branch ${SOURCE_BRANCH} \
-          --target-branch ${TARGET_BRANCH} \
-          --conductor ${GITHUB_ACTOR}
+      - name: Update older release branch
+        env:
+          GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+        run: |
+          echo SOURCE_BRANCH=${SOURCE_BRANCH}
+          echo TARGET_BRANCH=${TARGET_BRANCH}
+          npx tsx ./pr-checks/update-release-branch.ts \
+            --repository-nwo ${{ github.repository }} \
+            --source-branch ${SOURCE_BRANCH} \
+            --target-branch ${TARGET_BRANCH} \
+            --conductor ${GITHUB_ACTOR}

.github/workflows/update-supported-enterprise-server-versions.yml

@@ -26,10 +26,10 @@ jobs:
         uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
 
       - name: Set up Node.js
-        uses: actions/setup-node@820762786026740c76f36085b0efc47a31fe5020 # v7.0.0
+        uses: actions/setup-node@949feb2413d6458794dcd2491c4babbbce0c15c1 # v7.1.0
         with:
           node-version: 24
-          cache: 'npm'
+          cache: "npm"
 
       - name: Install dependencies
         run: npm ci

.vscode/settings.json

@@ -15,7 +15,7 @@
   "search.exclude": {
     "**/node_modules": true,
     "build": true,
-    "lib": true,
+    "lib": true
   },
   // Installing a new Node package often triggers VS Code's git limit warnings as there is typically
   // an intermediate stage where many files are modified. This setting suppresses these warnings.
@@ -26,4 +26,9 @@
   "[typescript]": {
     "editor.defaultFormatter": "esbenp.prettier-vscode"
   },
+  "[yaml]": {
+    "editor.tabSize": 2,
+    "editor.defaultFormatter": "esbenp.prettier-vscode"
+  },
+  "prettier.prettierPath": "./node_modules/prettier"
 }

CHANGELOG.md

@@ -2,101 +2,124 @@
 
 See the [releases page](https://github.com/github/codeql-action/releases) for the relevant changes to the CodeQL CLI and language packs.
 
-## [UNRELEASED]
+## 3.39.3 - 04 Nov 2026
+
+- Fixed diff-informed alert filtering incorrectly removing alerts in changed files whose paths contain spaces, special characters, or non-ASCII characters. [#4283](https://github.com/github/codeql-action/pull/4283)
+
+## 3.39.2 - 03 Nov 2026
+
+- Update default CodeQL bundle version to [2.27.4](https://github.com/github/codeql-action/releases/tag/codeql-bundle-v2.27.4). [#4284](https://github.com/github/codeql-action/pull/4284)
+- _Upcoming breaking change_: CodeQL version 2.22.3 and earlier were discontinued on 16 October 2026 alongside GitHub Enterprise Server 3.18, and will be unsupported by the next minor release of the CodeQL Action. Added a deprecation warning for customers using these versions of CodeQL. [#4266](https://github.com/github/codeql-action/pull/4266)
+- Starting with macOS 27 and Xcode 27, traced analyses are unsupported. See [this blog post for more information](https://github.blog/changelog/2026-10-19-codeql-changes-for-macos-27-xcode-27-and-swift-6-4/). The CodeQL Action will now try to identify if a workflow is about to perform a traced analysis on version 27 or above of macOS or Xcode. If so, the CodeQL Action will emit a corresponding warning that will also be visible on the [Tool Status Page](https://docs.github.com/en/code-security/how-tos/find-and-fix-code-vulnerabilities/manage-your-configuration/use-the-tools-status-page-for-code-scanning). This check will be rolled out following this release of the CodeQL Action. [#4221](https://github.com/github/codeql-action/pull/4221)
+- The undocumented TRAP cache cleanup feature that could be enabled using the `CODEQL_ACTION_CLEANUP_TRAP_CACHES` environment variable has been removed, as announced in the release notes for CodeQL Action 4.35.2. The `analyze` Action now warns if this environment variable is set. If you used TRAP cache cleanup to limit Actions cache usage, we recommend disabling TRAP caching by passing the `trap-caching: false` input to the `init` Action. [#4243](https://github.com/github/codeql-action/pull/4243)
+
+## 3.39.1 - 21 Oct 2026
+
+- Update default CodeQL bundle version to [2.27.3](https://github.com/github/codeql-action/releases/tag/codeql-bundle-v2.27.3). [#4256](https://github.com/github/codeql-action/pull/4256)
+
+## 3.39.0 - 15 Oct 2026
+
+- _Breaking change_: Bump the minimum required CodeQL bundle version to 2.20.7. [#4205](https://github.com/github/codeql-action/pull/4205)
+- The `codeql-action/analyze` step now validates that a correct argument for the `checkout_path` input has been provided. The `checkout_path` input must be set to the path where the repository that is being analyzed is checked out at on the runner, if that path is something other than the workspace root. If the path does not point to a repository checkout or is different from the path that was used by `codeql-action/init`, then the CodeQL Action now produces a warning. [#4148](https://github.com/github/codeql-action/pull/4148)
+- Resolved an issue with third-party caching implementations that prevented caches from being restored correctly. [#4206](https://github.com/github/codeql-action/pull/4206)
+- The `codeql-action/start-proxy` step that is used in Code Scanning Default Setup now finds CodeQL releases using the same logic as `codeql-action/init`. This primarily benefits customers who are using GitHub instances other than `github.com` where the `codeql-action/start-proxy` step may previously have been unable to locate recent releases and ended up using outdated versions of the private registry authentication proxy as a result. [#4198](https://github.com/github/codeql-action/pull/4198)
+
+## 3.38.3 - 08 Oct 2026
 
 - _Upcoming breaking change_: CodeQL version 2.21.2 and earlier were discontinued on 24 September 2026 alongside GitHub Enterprise Server 3.17, and will be unsupported by the next minor release of the CodeQL Action. Added a deprecation warning for customers using these versions of CodeQL. [#4188](https://github.com/github/codeql-action/pull/4188)
 - Update default CodeQL bundle version to [2.27.2](https://github.com/github/codeql-action/releases/tag/codeql-bundle-v2.27.2). [#4203](https://github.com/github/codeql-action/pull/4203)
+- Fixed a bug where the decision of whether to use a per-language bundle did not account for custom configurations that reference queries outside of compiled CodeQL packs. This issue was caught during internal testing and did not affect any customer repositories. We will resume the roll out of per-language bundles in the coming weeks. [#4184](https://github.com/github/codeql-action/pull/4184)
 
-## 4.38.2 - 24 Sept 2026
+## 3.38.2 - 24 Sept 2026
 
 - Update default CodeQL bundle version to [2.27.1](https://github.com/github/codeql-action/releases/tag/codeql-bundle-v2.27.1). [#4160](https://github.com/github/codeql-action/pull/4160)
 
-## 4.38.1 - 18 Sept 2026
+## 3.38.1 - 18 Sept 2026
 
 - The CodeQL Action now has experimental support for CodeQL releases for which per-language bundles are available. Per-language bundles support analysis for a single language and are therefore smaller than the combined bundles that allow analysis for all supported languages. As a result, per-language bundles take up less space on disk and are faster to download. We expect to roll this change out to everyone in the coming weeks. [#4146](https://github.com/github/codeql-action/pull/4146)
 
-## 4.38.0 - 09 Sept 2026
+## 3.38.0 - 09 Sept 2026
 
 - On GitHub-hosted runners, the CodeQL Action now deletes unused CodeQL bundles from the toolcache before downloading a different bundle, which frees up disk space for the analysis. We expect to roll this change out to everyone in September. [#4124](https://github.com/github/codeql-action/pull/4124)
 - The CodeQL Action now supports CodeQL releases that are compatible with Linux Arm64 and downloads the native `linux-arm64` CodeQL bundle when available. [#4072](https://github.com/github/codeql-action/pull/4072)
 - Update default CodeQL bundle version to [2.27.0](https://github.com/github/codeql-action/releases/tag/codeql-bundle-v2.27.0). [#4129](https://github.com/github/codeql-action/pull/4129)
 
-## 4.37.9 - 26 Aug 2026
+## 3.37.9 - 26 Aug 2026
 
 - Update default CodeQL bundle version to [2.26.4](https://github.com/github/codeql-action/releases/tag/codeql-bundle-v2.26.4). [#4106](https://github.com/github/codeql-action/pull/4106)
 
-## 4.37.8 - 21 Aug 2026
+## 3.37.8 - 21 Aug 2026
 
 No user facing changes.
 
-## 4.37.7 - 13 Aug 2026
+## 3.37.7 - 13 Aug 2026
 
 - Update default CodeQL bundle version to [2.26.3](https://github.com/github/codeql-action/releases/tag/codeql-bundle-v2.26.3). [#4085](https://github.com/github/codeql-action/pull/4085)
 
-## 4.37.6 - 04 Aug 2026
+## 3.37.6 - 04 Aug 2026
 
 - Changed the default filepath for the new remote file address format that was introduced in CodeQL Action 4.37.0 / 3.37.0 to `.github/codeql-config.yml` to align it with the suggested path that is used elsewhere. [#4070](https://github.com/github/codeql-action/pull/4070)
 
-## 4.37.5 - 03 Aug 2026
+## 3.37.5 - 03 Aug 2026
 
 - Fixed a bug where a network error while streaming the download of the CodeQL bundle could terminate the `init` Action instead of falling back to downloading the bundle before extracting it. [#4061](https://github.com/github/codeql-action/pull/4061)
 
-## 4.37.4 - 29 Jul 2026
+## 3.37.4 - 29 Jul 2026
 
 - This version of the CodeQL Action adds support for the `tools` input for the `codeql-action/init` step to be specified using a `github-codeql-tools` [repository property](https://docs.github.com/en/organizations/managing-organization-settings/managing-custom-properties-for-repositories-in-your-organization). This feature will gradually be rolled out following the release of this version. Once rolled out, this allows for the CodeQL CLI version that is used in GitHub-managed workflows, such as Default Setup, to be set to a custom value. For example, customers who run into issues with rate limits when a new CodeQL CLI version is released can set the value to `toolcache` to always use the CodeQL CLI version that is available in the runner toolcache. For Advanced Setup workflows, the value provided for `tools` in the workflow definition always takes precedence unless the value of the repository property starts with `!`. [#4037](https://github.com/github/codeql-action/pull/4037)
 - Update default CodeQL bundle version to [2.26.2](https://github.com/github/codeql-action/releases/tag/codeql-bundle-v2.26.2). [#4051](https://github.com/github/codeql-action/pull/4051)
 
-## 4.37.3 - 22 Jul 2026
+## 3.37.3 - 22 Jul 2026
 
 No user facing changes.
 
-## 4.37.2 - 21 Jul 2026
+## 3.37.2 - 21 Jul 2026
 
 - The new address format for the `config-file` input that was introduced in CodeQL Action 4.37.0 is now enabled by default. In addition to the format described there, the `remote=` prefix can now be used to explicitly indicate that the input refers to a remote file. All previous input formats continue to be accepted as well. [#4023](https://github.com/github/codeql-action/pull/4023)
 - The CodeQL Action can now make use of [configured private registries](https://docs.github.com/en/code-security/how-tos/secure-at-scale/configure-organization-security/manage-usage-and-access/giving-org-access-private-registries) in Default Setup to retrieve CodeQL configuration files from remote repositories that require authentication. This will allow customers to store their CodeQL configuration in a single repository that can then be referenced by Default Setup workflows in other repositories. We expect to roll this and other, related changes out to everyone in July. [#4007](https://github.com/github/codeql-action/pull/4007)
 
-## 4.37.1 - 16 Jul 2026
+## 3.37.1 - 16 Jul 2026
 
 - _Upcoming breaking change_: Add a deprecation warning for customers using CodeQL version 2.20.6 and earlier. These versions of CodeQL were discontinued on 1 July 2026 alongside GitHub Enterprise Server 3.16, and will be unsupported by the next minor release of the CodeQL Action. [#3956](https://github.com/github/codeql-action/pull/3956)
 - Update default CodeQL bundle version to [2.26.1](https://github.com/github/codeql-action/releases/tag/codeql-bundle-v2.26.1). [#4019](https://github.com/github/codeql-action/pull/4019)
 
-## 4.37.0 - 08 Jul 2026
+## 3.37.0 - 08 Jul 2026
 
 - Update default CodeQL bundle version to [2.26.0](https://github.com/github/codeql-action/releases/tag/codeql-bundle-v2.26.0). [#3995](https://github.com/github/codeql-action/pull/3995)
 - In addition to the existing input format, the `config-file` input for the `codeql-action/init` step will soon support a new `[owner/]repo[@ref][:path]` format. All components except the repository name are optional. If omitted, `owner` defaults to the same owner as the repository the analysis is running for, `ref` to `main`, and `path` to `.github/codeql-action.yaml`. Support for this format ships in this version of the CodeQL Action, but will only be enabled over the coming weeks. [#3973](https://github.com/github/codeql-action/pull/3973)
 
-## 4.36.3 - 01 Jul 2026
+## 3.36.3 - 01 Jul 2026
 
 No user facing changes.
 
-## 4.36.2 - 04 Jun 2026
+## 3.36.2 - 04 Jun 2026
 
 - Cache CodeQL CLI version information across Actions steps. [#3943](https://github.com/github/codeql-action/pull/3943)
 - Reduce requests while waiting for analysis processing by using exponential backoff when polling SARIF processing status. [#3937](https://github.com/github/codeql-action/pull/3937)
 - Update default CodeQL bundle version to [2.25.6](https://github.com/github/codeql-action/releases/tag/codeql-bundle-v2.25.6). [#3948](https://github.com/github/codeql-action/pull/3948)
 
-## 4.36.1 - 02 Jun 2026
+## 3.36.1 - 02 Jun 2026
 
 No user facing changes.
 
-## 4.36.0 - 22 May 2026
+## 3.36.0 - 22 May 2026
 
 - _Breaking change_: Bump the minimum required CodeQL bundle version to 2.19.4. [#3894](https://github.com/github/codeql-action/pull/3894)
 - Add support for SHA-256 Git object IDs. [#3893](https://github.com/github/codeql-action/pull/3893)
 - Update default CodeQL bundle version to [2.25.5](https://github.com/github/codeql-action/releases/tag/codeql-bundle-v2.25.5). [#3926](https://github.com/github/codeql-action/pull/3926)
 
-## 4.35.5 - 15 May 2026
+## 3.35.5 - 15 May 2026
 
 - We have improved how the JavaScript bundles for the CodeQL Action are generated to avoid duplication across bundles and reduce the size of the repository by around 70%. This should have no effect on the runtime behaviour of the CodeQL Action. [#3899](https://github.com/github/codeql-action/pull/3899)
 - For performance and accuracy reasons, [improved incremental analysis](https://github.com/github/roadmap/issues/1158) will now only be enabled on a pull request when diff-informed analysis is also enabled for that run. If diff-informed analysis is unavailable (for example, because the PR diff ranges could not be computed), the action will fall back to a full analysis. [#3791](https://github.com/github/codeql-action/pull/3791)
 - If multiple inputs are provided for the GitHub-internal `analysis-kinds` input, only `code-scanning` will be enabled. The `analysis-kinds` input is experimental, for GitHub-internal use only, and may change without notice at any time. [#3892](https://github.com/github/codeql-action/pull/3892)
 - Added an experimental change which, when running a Code Scanning analysis for a PR with [improved incremental analysis](https://github.com/github/roadmap/issues/1158) enabled, prefers CodeQL CLI versions that have a cached overlay-base database for the configured languages. This speeds up analysis for a repository when there is not yet a cached overlay-base database for the latest CLI version. We expect to roll this change out to everyone in May. [#3880](https://github.com/github/codeql-action/pull/3880)
 
-## 4.35.4 - 07 May 2026
+## 3.35.4 - 07 May 2026
 
 - Update default CodeQL bundle version to [2.25.4](https://github.com/github/codeql-action/releases/tag/codeql-bundle-v2.25.4). [#3881](https://github.com/github/codeql-action/pull/3881)
 
-## 4.35.3 - 01 May 2026
+## 3.35.3 - 01 May 2026
 
 - _Upcoming breaking change_: Add a deprecation warning for customers using CodeQL version 2.19.3 and earlier. These versions of CodeQL were discontinued on 9 April 2026 alongside GitHub Enterprise Server 3.15, and will be unsupported by the next minor release of the CodeQL Action. [#3837](https://github.com/github/codeql-action/pull/3837)
 - Configurations for private registries that use Cloudsmith or GCP OIDC are now accepted. [#3850](https://github.com/github/codeql-action/pull/3850)
@@ -104,7 +127,7 @@ No user facing changes.
 - Fixed a bug where two diagnostics produced within the same millisecond could overwrite each other on disk, causing one of them to be lost. [#3852](https://github.com/github/codeql-action/pull/3852)
 - Update default CodeQL bundle version to [2.25.3](https://github.com/github/codeql-action/releases/tag/codeql-bundle-v2.25.3). [#3865](https://github.com/github/codeql-action/pull/3865)
 
-## 4.35.2 - 15 Apr 2026
+## 3.35.2 - 15 Apr 2026
 
 - The undocumented TRAP cache cleanup feature that could be enabled using the `CODEQL_ACTION_CLEANUP_TRAP_CACHES` environment variable is deprecated and will be removed in May 2026. If you are affected by this, we recommend disabling TRAP caching by passing the `trap-caching: false` input to the `init` Action. [#3795](https://github.com/github/codeql-action/pull/3795)
 - The Git version 2.36.0 requirement for improved incremental analysis now only applies to repositories that contain submodules. [#3789](https://github.com/github/codeql-action/pull/3789)
@@ -112,26 +135,26 @@ No user facing changes.
 - Fixed a bug in the validation of OIDC configurations for private registries that was added in CodeQL Action 4.33.0 / 3.33.0. [#3807](https://github.com/github/codeql-action/pull/3807)
 - Update default CodeQL bundle version to [2.25.2](https://github.com/github/codeql-action/releases/tag/codeql-bundle-v2.25.2). [#3823](https://github.com/github/codeql-action/pull/3823)
 
-## 4.35.1 - 27 Mar 2026
+## 3.35.1 - 27 Mar 2026
 
 - Fix incorrect minimum required Git version for [improved incremental analysis](https://github.com/github/roadmap/issues/1158): it should have been 2.36.0, not 2.11.0. [#3781](https://github.com/github/codeql-action/pull/3781)
 
-## 4.35.0 - 27 Mar 2026
+## 3.35.0 - 27 Mar 2026
 
 - Reduced the minimum Git version required for [improved incremental analysis](https://github.com/github/roadmap/issues/1158) from 2.38.0 to 2.11.0. [#3767](https://github.com/github/codeql-action/pull/3767)
 - Update default CodeQL bundle version to [2.25.1](https://github.com/github/codeql-action/releases/tag/codeql-bundle-v2.25.1). [#3773](https://github.com/github/codeql-action/pull/3773)
 
-## 4.34.1 - 20 Mar 2026
+## 3.34.1 - 20 Mar 2026
 
 - Downgrade default CodeQL bundle version to [2.24.3](https://github.com/github/codeql-action/releases/tag/codeql-bundle-v2.24.3) due to issues with a small percentage of Actions and JavaScript analyses. [#3762](https://github.com/github/codeql-action/pull/3762)
 
-## 4.34.0 - 20 Mar 2026
+## 3.34.0 - 20 Mar 2026
 
 - Added an experimental change which disables TRAP caching when [improved incremental analysis](https://github.com/github/roadmap/issues/1158) is enabled, since improved incremental analysis supersedes TRAP caching. This will improve performance and reduce Actions cache usage. We expect to roll this change out to everyone in March. [#3569](https://github.com/github/codeql-action/pull/3569)
 - We are rolling out improved incremental analysis to C/C++ analyses that use build mode `none`. We expect this rollout to be complete by the end of April 2026. [#3584](https://github.com/github/codeql-action/pull/3584)
 - Update default CodeQL bundle version to [2.25.0](https://github.com/github/codeql-action/releases/tag/codeql-bundle-v2.25.0). [#3585](https://github.com/github/codeql-action/pull/3585)
 
-## 4.33.0 - 16 Mar 2026
+## 3.33.0 - 16 Mar 2026
 
 - Upcoming change: Starting April 2026, the CodeQL Action will skip collecting file coverage information on pull requests to improve analysis performance. File coverage information will still be computed on non-PR analyses. Pull request analyses will log a warning about this upcoming change. [#3562](https://github.com/github/codeql-action/pull/3562)
 
@@ -145,11 +168,11 @@ No user facing changes.
 - Fixed the retry mechanism for database uploads. Previously this would fail with the error "Response body object should not be disturbed or locked". [#3564](https://github.com/github/codeql-action/pull/3564)
 - A warning is now emitted if the CodeQL Action detects a repository property whose name suggests that it relates to the CodeQL Action, but which is not one of the properties recognised by the current version of the CodeQL Action. [#3570](https://github.com/github/codeql-action/pull/3570)
 
-## 4.32.6 - 05 Mar 2026
+## 3.32.6 - 05 Mar 2026
 
 - Update default CodeQL bundle version to [2.24.3](https://github.com/github/codeql-action/releases/tag/codeql-bundle-v2.24.3). [#3548](https://github.com/github/codeql-action/pull/3548)
 
-## 4.32.5 - 02 Mar 2026
+## 3.32.5 - 02 Mar 2026
 
 - Repositories owned by an organization can now set up the `github-codeql-disable-overlay` custom repository property to disable [improved incremental analysis for CodeQL](https://github.com/github/roadmap/issues/1158). First, create a custom repository property with the name `github-codeql-disable-overlay` and the type "True/false" in the organization's settings. Then in the repository's settings, set this property to `true` to disable improved incremental analysis. For more information, see [Managing custom properties for repositories in your organization](https://docs.github.com/en/organizations/managing-organization-settings/managing-custom-properties-for-repositories-in-your-organization). This feature is not yet available on GitHub Enterprise Server. [#3507](https://github.com/github/codeql-action/pull/3507)
 - Added an experimental change so that when [improved incremental analysis](https://github.com/github/roadmap/issues/1158) fails on a runner — potentially due to insufficient disk space — the failure is recorded in the Actions cache so that subsequent runs will automatically skip improved incremental analysis until something changes (e.g. a larger runner is provisioned or a new CodeQL version is released). We expect to roll this change out to everyone in March. [#3487](https://github.com/github/codeql-action/pull/3487)
@@ -159,7 +182,7 @@ No user facing changes.
 - Added an experimental change which allows the `start-proxy` action to resolve the CodeQL CLI version from feature flags instead of using the linked CLI bundle version. We expect to roll this change out to everyone in March. [#3512](https://github.com/github/codeql-action/pull/3512)
 - The previously experimental changes from versions 4.32.3, 4.32.4, 3.32.3 and 3.32.4 are now enabled by default. [#3503](https://github.com/github/codeql-action/pull/3503), [#3504](https://github.com/github/codeql-action/pull/3504)
 
-## 4.32.4 - 20 Feb 2026
+## 3.32.4 - 20 Feb 2026
 
 - Update default CodeQL bundle version to [2.24.2](https://github.com/github/codeql-action/releases/tag/codeql-bundle-v2.24.2). [#3493](https://github.com/github/codeql-action/pull/3493)
 - Added an experimental change which improves how certificates are generated for the authentication proxy that is used by the CodeQL Action in Default Setup when [private package registries are configured](https://docs.github.com/en/code-security/how-tos/secure-at-scale/configure-organization-security/manage-usage-and-access/giving-org-access-private-registries). This is expected to generate more widely compatible certificates and should have no impact on analyses which are working correctly already. We expect to roll this change out to everyone in February. [#3473](https://github.com/github/codeql-action/pull/3473)
@@ -167,89 +190,89 @@ No user facing changes.
 - Added a setting which allows the CodeQL Action to enable network debugging for Java programs. This will help GitHub staff support customers with troubleshooting issues in GitHub-managed CodeQL workflows, such as Default Setup. This setting can only be enabled by GitHub staff. [#3485](https://github.com/github/codeql-action/pull/3485)
 - Added a setting which enables GitHub-managed workflows, such as Default Setup, to use a [nightly CodeQL CLI release](https://github.com/dsp-testing/codeql-cli-nightlies) instead of the latest, stable release that is used by default. This will help GitHub staff support customers whose analyses for a given repository or organization require early access to a change in an upcoming CodeQL CLI release. This setting can only be enabled by GitHub staff. [#3484](https://github.com/github/codeql-action/pull/3484)
 
-## 4.32.3 - 13 Feb 2026
+## 3.32.3 - 13 Feb 2026
 
 - Added experimental support for testing connections to [private package registries](https://docs.github.com/en/code-security/how-tos/secure-at-scale/configure-organization-security/manage-usage-and-access/giving-org-access-private-registries). This feature is not currently enabled for any analysis. In the future, it may be enabled by default for Default Setup. [#3466](https://github.com/github/codeql-action/pull/3466)
 
-## 4.32.2 - 05 Feb 2026
+## 3.32.2 - 05 Feb 2026
 
 - Update default CodeQL bundle version to [2.24.1](https://github.com/github/codeql-action/releases/tag/codeql-bundle-v2.24.1). [#3460](https://github.com/github/codeql-action/pull/3460)
 
-## 4.32.1 - 02 Feb 2026
+## 3.32.1 - 02 Feb 2026
 
 - A warning is now shown in Default Setup workflow logs if a [private package registry is configured](https://docs.github.com/en/code-security/how-tos/secure-at-scale/configure-organization-security/manage-usage-and-access/giving-org-access-private-registries) using a GitHub Personal Access Token (PAT), but no username is configured. [#3422](https://github.com/github/codeql-action/pull/3422)
 - Fixed a bug which caused the CodeQL Action to fail when repository properties cannot successfully be retrieved. [#3421](https://github.com/github/codeql-action/pull/3421)
 
-## 4.32.0 - 26 Jan 2026
+## 3.32.0 - 26 Jan 2026
 
 - Update default CodeQL bundle version to [2.24.0](https://github.com/github/codeql-action/releases/tag/codeql-bundle-v2.24.0). [#3425](https://github.com/github/codeql-action/pull/3425)
 
-## 4.31.11 - 23 Jan 2026
+## 3.31.11 - 23 Jan 2026
 
 - When running a Default Setup workflow with [Actions debugging enabled](https://docs.github.com/en/actions/how-tos/monitor-workflows/enable-debug-logging), the CodeQL Action will now use more unique names when uploading logs from the Dependabot authentication proxy as workflow artifacts. This ensures that the artifact names do not clash between multiple jobs in a build matrix. [#3409](https://github.com/github/codeql-action/pull/3409)
 - Improved error handling throughout the CodeQL Action. [#3415](https://github.com/github/codeql-action/pull/3415)
 - Added experimental support for automatically excluding [generated files](https://docs.github.com/en/repositories/working-with-files/managing-files/customizing-how-changed-files-appear-on-github) from the analysis. This feature is not currently enabled for any analysis. In the future, it may be enabled by default for some GitHub-managed analyses. [#3318](https://github.com/github/codeql-action/pull/3318)
 - The changelog extracts that are included with releases of the CodeQL Action are now shorter to avoid duplicated information from appearing in Dependabot PRs. [#3403](https://github.com/github/codeql-action/pull/3403)
 
-## 4.31.10 - 12 Jan 2026
+## 3.31.10 - 12 Jan 2026
 
 - Update default CodeQL bundle version to 2.23.9. [#3393](https://github.com/github/codeql-action/pull/3393)
 
-## 4.31.9 - 16 Dec 2025
+## 3.31.9 - 16 Dec 2025
 
 No user facing changes.
 
-## 4.31.8 - 11 Dec 2025
+## 3.31.8 - 11 Dec 2025
 
 - Update default CodeQL bundle version to 2.23.8. [#3354](https://github.com/github/codeql-action/pull/3354)
 
-## 4.31.7 - 05 Dec 2025
+## 3.31.7 - 05 Dec 2025
 
 - Update default CodeQL bundle version to 2.23.7. [#3343](https://github.com/github/codeql-action/pull/3343)
 
-## 4.31.6 - 01 Dec 2025
+## 3.31.6 - 01 Dec 2025
 
 No user facing changes.
 
-## 4.31.5 - 24 Nov 2025
+## 3.31.5 - 24 Nov 2025
 
 - Update default CodeQL bundle version to 2.23.6. [#3321](https://github.com/github/codeql-action/pull/3321)
 
-## 4.31.4 - 18 Nov 2025
+## 3.31.4 - 18 Nov 2025
 
 No user facing changes.
 
-## 4.31.3 - 13 Nov 2025
+## 3.31.3 - 13 Nov 2025
 
 - CodeQL Action v3 will be deprecated in December 2026.  The Action now logs a warning for customers who are running v3 but could be running v4. For more information, see [Upcoming deprecation of CodeQL Action v3](https://github.blog/changelog/2025-10-28-upcoming-deprecation-of-codeql-action-v3/).
 - Update default CodeQL bundle version to 2.23.5. [#3288](https://github.com/github/codeql-action/pull/3288)
 
-## 4.31.2 - 30 Oct 2025
+## 3.31.2 - 30 Oct 2025
 
 No user facing changes.
 
-## 4.31.1 - 30 Oct 2025
+## 3.31.1 - 30 Oct 2025
 
 - The `add-snippets` input has been removed from the `analyze` action. This input has been deprecated since CodeQL Action 3.26.4 in August 2024 when this removal was announced.
 
-## 4.31.0 - 24 Oct 2025
+## 3.31.0 - 24 Oct 2025
 
 - Bump minimum CodeQL bundle version to 2.17.6. [#3223](https://github.com/github/codeql-action/pull/3223)
 - When SARIF files are uploaded by the `analyze` or `upload-sarif` actions, the CodeQL Action automatically performs post-processing steps to prepare the data for the upload. Previously, these post-processing steps were only performed before an upload took place. We are now changing this so that the post-processing steps will always be performed, even when the SARIF files are not uploaded. This does not change anything for the `upload-sarif` action. For `analyze`, this may affect Advanced Setup for CodeQL users who specify a value other than `always` for the `upload` input. [#3222](https://github.com/github/codeql-action/pull/3222)
 
-## 4.30.9 - 17 Oct 2025
+## 3.30.9 - 17 Oct 2025
 
 - Update default CodeQL bundle version to 2.23.3. [#3205](https://github.com/github/codeql-action/pull/3205)
 - Experimental: A new `setup-codeql` action has been added which is similar to `init`, except it only installs the CodeQL CLI and does not initialize a database. Do not use this in production as it is part of an internal experiment and subject to change at any time. [#3204](https://github.com/github/codeql-action/pull/3204)
 
-## 4.30.8 - 10 Oct 2025
+## 3.30.8 - 10 Oct 2025
 
 No user facing changes.
 
-## 4.30.7 - 06 Oct 2025
+## 3.30.7 - 06 Oct 2025
 
-- [v4+ only] The CodeQL Action now runs on Node.js v24. [#3169](https://github.com/github/codeql-action/pull/3169)
 
+No user facing changes.
 ## 3.30.6 - 02 Oct 2025
 
 - Update default CodeQL bundle version to 2.23.2. [#3168](https://github.com/github/codeql-action/pull/3168)

CONTRIBUTING.md

@@ -53,6 +53,7 @@ Here are a few things you can do that will increase the likelihood of your pull
 - Write tests.
 - Keep your change as focused as possible. If there are multiple changes you would like to make that are not dependent upon each other, consider submitting them as separate pull requests.
 - Write a [good commit message](http://tbaggery.com/2008/04/19/a-note-about-git-commit-messages.html).
+- For user-facing changes, add a change-note file. See [unreleased-change-notes/README.md](unreleased-change-notes/README.md).
 
 ## Releasing (write access required)
 

README.md

@@ -76,7 +76,6 @@ We typically release new minor versions of the CodeQL Action and Bundle when a n
 | `v4.33.0` | `2.24.3` | Enterprise Server 3.21 | |
 | `v4.31.10` | `2.23.9` | Enterprise Server 3.20 | |
 | `v3.29.11` | `2.22.4` | Enterprise Server 3.19 | |
-| `v3.28.21` | `2.21.3` | Enterprise Server 3.18 | |
 
 See the full list of GHES release and deprecation dates at [GitHub Enterprise Server releases](https://docs.github.com/en/enterprise-server/admin/all-releases#releases-of-github-enterprise-server).
 

action.yml

@@ -1,10 +1,10 @@
-name: 'CodeQL: Stub'
+name: "CodeQL: Stub"
 description: "Stub: Don't use this action directly. Read [the documentation](https://docs.github.com/en/code-security/code-scanning/introduction-to-code-scanning/about-code-scanning-with-codeql) instead."
-author: 'GitHub'
+author: "GitHub"
 runs:
-  using: 'composite'
+  using: "composite"
   steps:
-    - name: 'Stub'
+    - name: "Stub"
       run: |
         echo 'This is a stub. Read [the documentation](https://docs.github.com/en/code-security/code-scanning/introduction-to-code-scanning/about-code-scanning-with-codeql) instead.'
         exit 1

analyze/action.yml

@@ -94,6 +94,6 @@ outputs:
   sarif-id:
     description: The ID of the uploaded SARIF file.
 runs:
-  using: node24
+  using: node20
   main: "../lib/analyze-entry.js"
   post: "../lib/analyze-post-entry.js"

autobuild/action.yml

@@ -1,6 +1,6 @@
-name: 'CodeQL: Autobuild'
-description: 'Attempt to automatically build the code. Only used for analyzing languages that require a build. Use the `build-mode: autobuild` input in the `init` action instead.'
-author: 'GitHub'
+name: "CodeQL: Autobuild"
+description: "Attempt to automatically build the code. Only used for analyzing languages that require a build. Use the `build-mode: autobuild` input in the `init` action instead."
+author: "GitHub"
 inputs:
   token:
     description: "GitHub token to use for authenticating with this instance of GitHub. The token needs the `security-events: write` permission."
@@ -15,5 +15,5 @@ inputs:
       $GITHUB_WORKSPACE as its working directory.
     required: false
 runs:
-  using: node24
-  main: '../lib/autobuild-entry.js'
+  using: node20
+  main: "../lib/autobuild-entry.js"

ava.setup.mjs

@@ -1,3 +1,4 @@
 import pkg from "./package.json" with { type: "json" };
 
 globalThis.__CODEQL_ACTION_VERSION__ = pkg.version;
+globalThis.__CODEQL_ACTION_TEST_ENV__ = "unit-test";

build.mjs

@@ -78,7 +78,7 @@ const UPLOAD_LIB_SRC = "./src/upload-lib";
  *
  * The virtual module additionally re-exports `upload-lib` under the `uploadLib` namespace so that
  * external consumers can access it via the small `lib/upload-lib.js` stub emitted below.
- * 
+ *
  * A tiny stub file is emitted for each Action entrypoint, and one for `upload-lib`. Each stub
  * imports the shared bundle and calls/re-exports from the respective entry point.
  *
@@ -212,6 +212,7 @@ const context = await esbuild.context({
   target: ["node20"],
   define: {
     __CODEQL_ACTION_VERSION__: JSON.stringify(pkg.version),
+    __CODEQL_ACTION_TEST_ENV__: JSON.stringify(""),
   },
   metafile: true,
 });

eslint.config.mjs

@@ -140,6 +140,17 @@ export default [
       "no-async-foreach/no-async-foreach": "error",
       "no-sequences": "error",
       "no-shadow": "off",
+
+      // A basic check that we don't use `exportVariable` from `@actions/core`.
+      "no-restricted-syntax": [
+        "error",
+        {
+          selector: "MemberExpression[property.name='exportVariable']",
+          message:
+            "Use the `export` method of an `Env` instance or `exportEnvVar` from `environment.ts` instead.",
+        },
+      ],
+
       // This is overly restrictive with unsetting `EnvVar`s
       "@typescript-eslint/no-dynamic-delete": "off",
       "@typescript-eslint/no-shadow": "error",
@@ -157,6 +168,15 @@ export default [
       ],
     },
   },
+  {
+    files: ["src/environment.ts"],
+
+    // We allow `exportVariable` from `@actions/core` to be used in this file
+    // since it defines the wrapper around it that other modules use.
+    rules: {
+      "no-restricted-syntax": "off",
+    },
+  },
   {
     files: ["**/*.ts", "**/*.js"],